Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004581_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:119532842:119534142:1 gene:Zm00001d004581 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA N-glycosidase

Sequence

ATGGCTCTAGAAAAAATTGCCTCCATCGTTCAAGTGACTCCGTTCAACGTGACGTCGGAC
TCATACGCCACGTTCATCCAGAACGTACGTGTAGCTCTGGCCGGCGCGAAGCCTGACACG
GTGGTAGGGCCCAAATCCAAGGTAAGTCGGCCGGTGCTGGCCAAAGAGGCGTCGTCGTCT
GGCCTGCAGCCGCCGAAGTGGATCCACGTCGTGCTCAACGGCAAGGGCGGCGCCGCGCCC
ACGGTGGCCATCCGCAGCGACAACGCCTACATCGTCGGCTTCACCAACAGCAAGGGGACG
TGGTACCAGCTCAGCAGGACGGGCGCCCAGGAGAAGCTCGTCGACGACAACCCCGTGATG
GCGGGCTTCGACGGCAACTACAACACGCTCATCGGCGGCAGCGACAAGCTGCTGACCCTG
AACGTCGCCAAGTTTAGCGTGGCGGCCGCGGCCGCCACGTTCTGGAACCACAAGGCCGGA
AACACATCATATGGTGACGACTGCGGCAGCGACGAGGAAGAAGAAAGCGGCATGCTCCGC
GCTGGCGACCCGCTGAAGGTGGCGGTGGCGACCCTCGCCGTGGCCATCTGCGAGGCGGCG
AGGTTCGTCCCCGTCTCCACGGTCATCGGCAAAGGTTGGGGCGAGCAACGGGTGAGCGTC
ACGGCCAAGGAGGTAAGCTACATCATGGACTGGGGTGACCTGTCCCGCGCACTGCTCAAG
TGGAAGAGTGGCGGTTATAAGGACGACAAGCCTTTCCAGCCATTCAAGGGTATCGGGATA
AATAACGGGGAGGAAGCCTTGGCTGTGGTGGCCCTTCTGAAGCTCATGTCGGGAAGCCAG
AGCCTGTTGGCCTGGCTCAAGTGCTTCTGGGGGCTTCTGGTGAAGAAGCTCAAGCGGGAG
GACATGAATTACGAGAAGCCAAAGACTGCAGCCATCGTTAACCCACTTTAA

Peptide Sequence

PEP ID

Zm00001d004581_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:119532842:119534142:1 gene:Zm00001d004581 transcript:Zm00001d004581_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA N-glycosidase

Sequence

MALEKIASIVQVTPFNVTSDSYATFIQNVRVALAGAKPDTVVGPKSKVSRPVLAKEASSS
GLQPPKWIHVVLNGKGGAAPTVAIRSDNAYIVGFTNSKGTWYQLSRTGAQEKLVDDNPVM
AGFDGNYNTLIGGSDKLLTLNVAKFSVAAAAATFWNHKAGNTSYGDDCGSDEEEESGMLR
AGDPLKVAVATLAVAICEAARFVPVSTVIGKGWGEQRVSVTAKEVSYIMDWGDLSRALLK
WKSGGYKDDKPFQPFKGIGINNGEEALAVVALLKLMSGSQSLLAWLKCFWGLLVKKLKRE
DMNYEKPKTAAIVNPL

Transcript Sequence

Transcript ID

Zm00001d004581_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:119532842:119534142:1 gene:Zm00001d004581 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA N-glycosidase

Sequence

TATTTGCAACGTCAATTAGACAGCAGAAGTTGCAGGAGGTCCAGCCGTCCAGCTATGGCT
CTAGAAAAAATTGCCTCCATCGTTCAAGTGACTCCGTTCAACGTGACGTCGGACTCATAC
GCCACGTTCATCCAGAACGTACGTGTAGCTCTGGCCGGCGCGAAGCCTGACACGGTGGTA
GGGCCCAAATCCAAGGTAAGTCGGCCGGTGCTGGCCAAAGAGGCGTCGTCGTCTGGCCTG
CAGCCGCCGAAGTGGATCCACGTCGTGCTCAACGGCAAGGGCGGCGCCGCGCCCACGGTG
GCCATCCGCAGCGACAACGCCTACATCGTCGGCTTCACCAACAGCAAGGGGACGTGGTAC
CAGCTCAGCAGGACGGGCGCCCAGGAGAAGCTCGTCGACGACAACCCCGTGATGGCGGGC
TTCGACGGCAACTACAACACGCTCATCGGCGGCAGCGACAAGCTGCTGACCCTGAACGTC
GCCAAGTTTAGCGTGGCGGCCGCGGCCGCCACGTTCTGGAACCACAAGGCCGGAAACACA
TCATATGGTGACGACTGCGGCAGCGACGAGGAAGAAGAAAGCGGCATGCTCCGCGCTGGC
GACCCGCTGAAGGTGGCGGTGGCGACCCTCGCCGTGGCCATCTGCGAGGCGGCGAGGTTC
GTCCCCGTCTCCACGGTCATCGGCAAAGGTTGGGGCGAGCAACGGGTGAGCGTCACGGCC
AAGGAGGTAAGCTACATCATGGACTGGGGTGACCTGTCCCGCGCACTGCTCAAGTGGAAG
AGTGGCGGTTATAAGGACGACAAGCCTTTCCAGCCATTCAAGGGTATCGGGATAAATAAC
GGGGAGGAAGCCTTGGCTGTGGTGGCCCTTCTGAAGCTCATGTCGGGAAGCCAGAGCCTG
TTGGCCTGGCTCAAGTGCTTCTGGGGGCTTCTGGTGAAGAAGCTCAAGCGGGAGGACATG
AATTACGAGAAGCCAAAGACTGCAGCCATCGTTAACCCACTTTAATCTGTTATAGCATAC
ACTCGTCATCCGAGAATAAATGTGTTGTTAATTGCTTAATTCCAAGGGAAGTATATAATC
CTTTAATGCGTATTGCATGTGACATGTTCACAAGAGTGTCTTCAAATGTGATGGTGTATC
CATAAATATGGAGTACGAATTAAACATGTTTGTCACTTTCTCGCAAAACAATTAATTAAT
GTGGTATTGTGTCTATGAAAGTGA