Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004564_T021
CDS Infomation

cds chromosome:B73_RefGen_v4:2:118176688:118181628:-1 gene:Zm00001d004564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aconitate hydratase 3 mitochondrial
Sequence

ATGGACAACACTGGAGTCCCAGCTGTTGTAGACCTTGCAGCTATGCGTGATATGATGCCA
AAGTTGGGTTGTGATCCCTACAAGATCAATCCATTGATTCCCGTGGATGCTGTTATTGAC
CATGCAGTGCGAGTGGATGTAGCAGGGACCTATGATGCATTGGATAGAAACGAGGAGTTG
GAGTTCCAACGCAACAAAGAAAGGTTTGCTTTTCTTAAATGGGCATCCAATGCTTTCCAC
AACATGCAGGTTTTCCCTCCTGGTTCAGGCACTGTACACCAGGTAAACCTTGAGTATCTT
GCCCGAGTTGTCTTCAACGAAGATGGCATTCTTTACTTCGACAGCGTGGTTGGCACAGAC
TCACACACCACTATGATTAATAGTCTTGGAGTTGCTGGTTGGGGAGTAGGCGGTATTGAA
GCAGTCGTTGCAATGCTTGGCCAGCCAATGGGCATGGTTTTGCCTGGTGTGGTTGGATTC
AAGTTGAGTGGGAAGTTACAGGATGGTGTCACTACTACTGACATTGTTCTTACTATGACC
CAAATGCTAAGGAAGCACGGTGCTATTGGCAAATTCGTTGAATTCTATGGTGTTGGTGTG
GGCGAGCTATCTTTGCCTGCTAGGGCCACAATTGCCAACATGTCTCCAGAATATGGAGCT
ACCATGGGCTTCTTCCCTGTAGACCAAGTAGCATTGGACTATCTCAAATTGACAGGCCGA
AGCGATGAAACTGTGTCGATGATTGAAGCATACCTGCGAGCTAACAAAATGTTTGTGGAC
AAGCATGAGCCTGAGACGGAACGAGTTTTCTCTTCATATCTGGAGCTGGACCTTAGTGAG
GTGGAGCCTTGCGTTTCAGGCCCCAAAAGGCCTCATGATCGTGTCCCTTTGAAGGAAATG
AAGTCAGACTGGCATGCTTGCCTGGACAACGAAGTTGGTTTCAAGGGCTATGCGGTGCCA
AAGGAACAGCAAGGCAAAGTTGTGAAATTCGACTTCCATGGAAGGCCAGCTGAAATCAAG
CATGGCAGTGTTGTTCTTGCAGCAATATGTAGCTCCACAAACACATCAAATCCCAGCGTC
ATGATTGGTGCTGGCCTTGTGGCAAAGAAAGCCTGCGAATTGGGCCTTGAGGTGAAGCCA
TGGGTAAAGACAAGCCTTACCCCTGGATCTGTGGTTGCTACCGAGTACTTGAAACATAGT
GGCCTTCAAGATTATCTGAACCAGCAAGGGTTCCATGTCGCTGCGCATGGCTGCGCCACT
TGTGTGGGCAACTCTGGTGACCTGGATGGATCTGTATCCGCTGCTATCACAGAAAATGAT
ATCGTTGCTGCTGCGGTGCTGTCGGCCAACCGAAACTTCGAGGGGCGTGTGAACCCTCTC
ACTCGGGCTAACTACCTTGCCTCGCCGCCTCTGGTTGTTGCCTATGCTCTTGCCGGCACT
GTTGACATTGGTTTTGAGGAAGAGCCCATTGGAGTTGGAAAGGGTGGCAAGGAAATTTTC
TTGAGGGACATATGGCCTTCAAACCAAGAGATCGATGAGGTTGTGGAGTCCAGCGTGCAG
ACTCACTTGTTCAAGAAAGTGTACGACTCCATCATGGAACGTAACCCTAGGTGGAACCAG
CTGCCGGTTCCAAAGGAGGCACTGTACCCATGGGACGACAGGTCCACCTACATCCGCAAG
CCCACTTACCTGGAGGGCATGTCCATGACGCCGCCTGGCCCGCCCACGGTGACGGAGGCC
TACTGCCTGCTCAACCTTGGAGACAGCATCACCACGGACCACATCTCCTACTCGGGGAAG
ATCCCCGAGGGCACACCTGCGGCCAAGTATCTGCTCGAGTATGGTGTGGAGCCCAAGAAC
TTCAGCTCCTATGGTGGCCGCCGCGGGAACAATGAGGTGGTGATGAGGGGAGCGTTTGCC
AATATGAGGATCGTGAATAAGCTTCTTAATGGCGAGGCTGGTCCCTGGACGATCCATGTT
CCTACCGGGGAGAAGCTCTACGTTTACGACGCGGCAATGAAATACAAGTCGGAAGGTCAT
GACATGGTCATCATCGCTGGCTCCGAGTACGGCAGTGGCAGCTCTCGTGACTCTGCTGCC
AAGGGACCAATGCTACTGGGTGTCAAGTCGGTGATTGCAAAGAGCTTCGAGCGGATCCAC
CGGAGCAACTTGGTGGGGATGGGGATCATTCCTCTCTGCTTTCAAGCAGGAGAGGATGCC
GATTCACTCGGCCTCACCGGACGTGAGCGCTACACCATCCACCTCCCTACCAGCACCGCC
GAGATCAGTCCTGGTCAGGACGTGACCGTCACGACCCACGACGGAAGATCATTCACTTGC
ACTCTTCGCTTGGACACACAGGTATAA

Peptide Sequence

PEP ID

Zm00001d004564_P021
PEP Infomation

pep chromosome:B73_RefGen_v4:2:118176688:118181628:-1 gene:Zm00001d004564 transcript:Zm00001d004564_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aconitate hydratase 3 mitochondrial
Sequence

MDNTGVPAVVDLAAMRDMMPKLGCDPYKINPLIPVDAVIDHAVRVDVAGTYDALDRNEEL
EFQRNKERFAFLKWASNAFHNMQVFPPGSGTVHQVNLEYLARVVFNEDGILYFDSVVGTD
SHTTMINSLGVAGWGVGGIEAVVAMLGQPMGMVLPGVVGFKLSGKLQDGVTTTDIVLTMT
QMLRKHGAIGKFVEFYGVGVGELSLPARATIANMSPEYGATMGFFPVDQVALDYLKLTGR
SDETVSMIEAYLRANKMFVDKHEPETERVFSSYLELDLSEVEPCVSGPKRPHDRVPLKEM
KSDWHACLDNEVGFKGYAVPKEQQGKVVKFDFHGRPAEIKHGSVVLAAICSSTNTSNPSV
MIGAGLVAKKACELGLEVKPWVKTSLTPGSVVATEYLKHSGLQDYLNQQGFHVAAHGCAT
CVGNSGDLDGSVSAAITENDIVAAAVLSANRNFEGRVNPLTRANYLASPPLVVAYALAGT
VDIGFEEEPIGVGKGGKEIFLRDIWPSNQEIDEVVESSVQTHLFKKVYDSIMERNPRWNQ
LPVPKEALYPWDDRSTYIRKPTYLEGMSMTPPGPPTVTEAYCLLNLGDSITTDHISYSGK
IPEGTPAAKYLLEYGVEPKNFSSYGGRRGNNEVVMRGAFANMRIVNKLLNGEAGPWTIHV
PTGEKLYVYDAAMKYKSEGHDMVIIAGSEYGSGSSRDSAAKGPMLLGVKSVIAKSFERIH
RSNLVGMGIIPLCFQAGEDADSLGLTGRERYTIHLPTSTAEISPGQDVTVTTHDGRSFTC
TLRLDTQV

Transcript Sequence

Transcript ID

Zm00001d004564_T021
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:118176688:118181628:-1 gene:Zm00001d004564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aconitate hydratase 3 mitochondrial
Sequence

CAGCTACCAAGCATGCTTTCAAGCGTATATTGACGAGCCTGATTAAGCCTGGCGGTGGTG
AATACGGCAAGTTCTTCAGCCTTCCCGCACTAAATGATCCAAGGATCGATAAGCTTCCCT
ACTCTATACGTGTTCTCCTGGAATCAGCTATCCGCCATTGTGATAACTTCCAAGTTACAG
AGAGTGATGTCGAGAAAATCATTGATTGGGAGAACACATCTCCCAAGCTGGCTGAGATAC
CTTTCAAGCCAGCGAGATGCATTCTAATGGACAACACTGGAGTCCCAGCTGTTGTAGACC
TTGCAGCTATGCGTGATATGATGCCAAAGTTGGGTTGTGATCCCTACAAGATCAATCCAT
TGATTCCCGTGGATGCTGTTATTGACCATGCAGTGCGAGTGGATGTAGCAGGGACCTATG
ATGCATTGGATAGAAACGAGGAGTTGGAGTTCCAACGCAACAAAGAAAGGTTTGCTTTTC
TTAAATGGGCATCCAATGCTTTCCACAACATGCAGGTTTTCCCTCCTGGTTCAGGCACTG
TACACCAGGTAAACCTTGAGTATCTTGCCCGAGTTGTCTTCAACGAAGATGGCATTCTTT
ACTTCGACAGCGTGGTTGGCACAGACTCACACACCACTATGATTAATAGTCTTGGAGTTG
CTGGTTGGGGAGTAGGCGGTATTGAAGCAGTCGTTGCAATGCTTGGCCAGCCAATGGGCA
TGGTTTTGCCTGGTGTGGTTGGATTCAAGTTGAGTGGGAAGTTACAGGATGGTGTCACTA
CTACTGACATTGTTCTTACTATGACCCAAATGCTAAGGAAGCACGGTGCTATTGGCAAAT
TCGTTGAATTCTATGGTGTTGGTGTGGGCGAGCTATCTTTGCCTGCTAGGGCCACAATTG
CCAACATGTCTCCAGAATATGGAGCTACCATGGGCTTCTTCCCTGTAGACCAAGTAGCAT
TGGACTATCTCAAATTGACAGGCCGAAGCGATGAAACTGTGTCGATGATTGAAGCATACC
TGCGAGCTAACAAAATGTTTGTGGACAAGCATGAGCCTGAGACGGAACGAGTTTTCTCTT
CATATCTGGAGCTGGACCTTAGTGAGGTGGAGCCTTGCGTTTCAGGCCCCAAAAGGCCTC
ATGATCGTGTCCCTTTGAAGGAAATGAAGTCAGACTGGCATGCTTGCCTGGACAACGAAG
TTGGTTTCAAGGGCTATGCGGTGCCAAAGGAACAGCAAGGCAAAGTTGTGAAATTCGACT
TCCATGGAAGGCCAGCTGAAATCAAGCATGGCAGTGTTGTTCTTGCAGCAATATGTAGCT
CCACAAACACATCAAATCCCAGCGTCATGATTGGTGCTGGCCTTGTGGCAAAGAAAGCCT
GCGAATTGGGCCTTGAGGTGAAGCCATGGGTAAAGACAAGCCTTACCCCTGGATCTGTGG
TTGCTACCGAGTACTTGAAACATAGTGGCCTTCAAGATTATCTGAACCAGCAAGGGTTCC
ATGTCGCTGCGCATGGCTGCGCCACTTGTGTGGGCAACTCTGGTGACCTGGATGGATCTG
TATCCGCTGCTATCACAGAAAATGATATCGTTGCTGCTGCGGTGCTGTCGGCCAACCGAA
ACTTCGAGGGGCGTGTGAACCCTCTCACTCGGGCTAACTACCTTGCCTCGCCGCCTCTGG
TTGTTGCCTATGCTCTTGCCGGCACTGTTGACATTGGTTTTGAGGAAGAGCCCATTGGAG
TTGGAAAGGGTGGCAAGGAAATTTTCTTGAGGGACATATGGCCTTCAAACCAAGAGATCG
ATGAGGTTGTGGAGTCCAGCGTGCAGACTCACTTGTTCAAGAAAGTGTACGACTCCATCA
TGGAACGTAACCCTAGGTGGAACCAGCTGCCGGTTCCAAAGGAGGCACTGTACCCATGGG
ACGACAGGTCCACCTACATCCGCAAGCCCACTTACCTGGAGGGCATGTCCATGACGCCGC
CTGGCCCGCCCACGGTGACGGAGGCCTACTGCCTGCTCAACCTTGGAGACAGCATCACCA
CGGACCACATCTCCTACTCGGGGAAGATCCCCGAGGGCACACCTGCGGCCAAGTATCTGC
TCGAGTATGGTGTGGAGCCCAAGAACTTCAGCTCCTATGGTGGCCGCCGCGGGAACAATG
AGGTGGTGATGAGGGGAGCGTTTGCCAATATGAGGATCGTGAATAAGCTTCTTAATGGCG
AGGCTGGTCCCTGGACGATCCATGTTCCTACCGGGGAGAAGCTCTACGTTTACGACGCGG
CAATGAAATACAAGTCGGAAGGTCATGACATGGTCATCATCGCTGGCTCCGAGTACGGCA
GTGGCAGCTCTCGTGACTCTGCTGCCAAGGGACCAATGCTACTGGGTGTCAAGTCGGTGA
TTGCAAAGAGCTTCGAGCGGATCCACCGGAGCAACTTGGTGGGGATGGGGATCATTCCTC
TCTGCTTTCAAGCAGGAGAGGATGCCGATTCACTCGGCCTCACCGGACGTGAGCGCTACA
CCATCCACCTCCCTACCAGCACCGCCGAGATCAGTCCTGGTCAGGACGTGACCGTCACGA
CCCACGACGGAAGATCATTCACTTGCACTCTTCGCTTGGACACACAGGTATAAGGATGCG
TGTT