Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004559_T028
CDS Infomation	cds chromosome:B73_RefGen_v4:2:118058924:118081119:1 gene:Zm00001d004559 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	ATGAAAATTATGGATTTTATGTGGAATTCGATTGGCGGGACCATACCTAAGGAGGTCGGA AATATCACTTCTCTGGAGTTAATGCTCCTGAATGGAAACCAATTGAATGGCTCTTTACCA GAGGAGATTGGCTTCCTTCCTAATCTGAATCGGATTCAGATTGATCAGAACCATATATCT GGACTTATACCTAAATCATTTGCTAACCTGAATAAAACCAAGCACTTTCACATGAACAAC AACTCATTGAGCGGTCAAATCCCACCTGAGTTATCCAGATTACCTTCACTTGTTCACCTA TTATTGGATAACAATAACTTGTCAGGCTACATTCCTCCAGAACTATCAAAGTTGCCAAAT GTGCTCATCATACAACTGGACAATAATAATTTCTCTGGAAGTACAATTCCTTCATCTTAT GGCAACATCTCAACACTTCTAAAATTGAGTTTAAGGAACTGCAGCTTGGAAGGACCTGTT CCTGATGTCAGTGGGATACCCCAACTTGGCTACTTGGATGTTAGCTGGAATCAATTGAGG GGTCCAATACCATCCATTCAATTTTCGAGCAACATAACTACAATTGATCTTTCCCACAAT AATCTTAATGGTTCCATTCCAGGAATTTTCTCTGGCCTTCCTTATCTCCAAAGACTGTCA CTTGACGACAACAATTTGACTGGTTCTGTTCCATCTAATATCTGGCAAGATATTGATCTA AGAGGAAATAAAAGTCTTGTACTGGATTTCCAGAACAATGCTCTCAACAATCTGTCAACT CCTCTTTCGCCCCCTCCCAATGTTACCATCCTATTACATGGAAACCCAGTATGCATTGGG CAAAACCAACTGAATATTTCTCAGTATTGTCAGTCAGGAACATATGTTGCACGTGGAGGT TCAGCAGATAACAGTACAGTTTGTCCACCATGCTCTAGCGACTTTCCTTTTGAAAGAATA CCGATGTCACCAATACCATGCTCATGTGTCGTTCCAGTTTATGTGGGTTACCGGCTTAAG AGTCCTGGGTTCTCAAATTTCATTCCATACGAATCCCAGTTCCAGCAGTACTTAACATCT GGGCTTTCACTGTCATCGTACCAATTAGAAGTTTCTACTTTTATGTGGGAAGAAGGCCCA AGGCTGAAGATGGACCTGAAAATATTTCCAAATAACACTCCCTTTTTCACTGTAAGTGAG GTGTTCAGGCTTAATGGTATGTTCACAGCTTGGCAGATTGCAGACTCTGATATATTTGGC CCATATGAACTTATCAGCTTCAACCAAGGGTGGTACAACACAATAATACCACAGGGTACA AAGTCTGGTCTGAGTACAGGTGCCATTGTTGGGGTGGTCATGGCGGCATTTGTTGCAGCT GCCATTCTTTCATCCCTCGTTACTATCATCATATTGCGGAGACGCTCAAGACAGTCTTCT TCAAATAAACGCACCGCGAAAAGAATTTCAATGAAAATTGCTGGTGTAAAAGACTTCACT TTTGATGAATTGTCACATTGTACACATGACTTTAATGATTCAACACTAATTGGCCAAGGA GGGTATGGCAAGGTATACAGAGGTGTGTTGGCTGATGGAATAGTAGTAGCAATAAAGCGA GCACAGCAAGGGTCTCTTCAAGGTTCTAAGGAATTCTTCACAGAGATAGAGTTGCTATCG AGGCTGCATCACCGTAATCTAGTCTCTTTGCTCGGTTATTGTGATGAAGATGATGAACAG GTAGTGCTTTCAAATCCTTTTTCTTTGTTCCCCCCTAAAGAAGACAAATTTTAA

Peptide Sequence

PEP ID	Zm00001d004559_P028
PEP Infomation	pep chromosome:B73_RefGen_v4:2:118058924:118081119:1 gene:Zm00001d004559 transcript:Zm00001d004559_T028 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	MKIMDFMWNSIGGTIPKEVGNITSLELMLLNGNQLNGSLPEEIGFLPNLNRIQIDQNHIS GLIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYIPPELSKLPN VLIIQLDNNNFSGSTIPSSYGNISTLLKLSLRNCSLEGPVPDVSGIPQLGYLDVSWNQLR GPIPSIQFSSNITTIDLSHNNLNGSIPGIFSGLPYLQRLSLDDNNLTGSVPSNIWQDIDL RGNKSLVLDFQNNALNNLSTPLSPPPNVTILLHGNPVCIGQNQLNISQYCQSGTYVARGG SADNSTVCPPCSSDFPFERIPMSPIPCSCVVPVYVGYRLKSPGFSNFIPYESQFQQYLTS GLSLSSYQLEVSTFMWEEGPRLKMDLKIFPNNTPFFTVSEVFRLNGMFTAWQIADSDIFG PYELISFNQGWYNTIIPQGTKSGLSTGAIVGVVMAAFVAAAILSSLVTIIILRRRSRQSS SNKRTAKRISMKIAGVKDFTFDELSHCTHDFNDSTLIGQGGYGKVYRGVLADGIVVAIKR AQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEDDEQVVLSNPFSLFPPKEDKF

Transcript Sequence

Transcript ID	Zm00001d004559_T028
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:118058924:118081119:1 gene:Zm00001d004559 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	TCATTATACTCTTCCTGATTTGCATTGTTGGAAAATAGACAATATTTTGTTTGGAACATA ATGTGTTAATACTATTCTGTTATGACTGAAGTTAGCTATTTTTACAATCAGATGTAATTA CTGTGATTCTGTGCACTTGTTTCACTTGACCACATCTTCCATCCACCAGTTTCCTCTCAA AAGCATAGGAGAGCAACATGTCATTTCAATAAAGAAGAGAATAATTTACAACCGCAAAAA AGCCCACCCCACCCCACCCGCCAGTTAATTCCATAGCTATTAAAGCATTTACGTGTATAA CACAAATTTGATTGCAGACAGCTCCTAAGTTTGAATCTATCTGGAATTTTGGCTCCTGAG CTTGGTCAGCTTTCTCAAATGAAAATTATGGATTTTATGTGGAATTCGATTGGCGGGACC ATACCTAAGGAGGTCGGAAATATCACTTCTCTGGAGTTAATGCTCCTGAATGGAAACCAA TTGAATGGCTCTTTACCAGAGGAGATTGGCTTCCTTCCTAATCTGAATCGGATTCAGATT GATCAGAACCATATATCTGGACTTATACCTAAATCATTTGCTAACCTGAATAAAACCAAG CACTTTCACATGAACAACAACTCATTGAGCGGTCAAATCCCACCTGAGTTATCCAGATTA CCTTCACTTGTTCACCTATTATTGGATAACAATAACTTGTCAGGCTACATTCCTCCAGAA CTATCAAAGTTGCCAAATGTGCTCATCATACAACTGGACAATAATAATTTCTCTGGAAGT ACAATTCCTTCATCTTATGGCAACATCTCAACACTTCTAAAATTGAGTTTAAGGAACTGC AGCTTGGAAGGACCTGTTCCTGATGTCAGTGGGATACCCCAACTTGGCTACTTGGATGTT AGCTGGAATCAATTGAGGGGTCCAATACCATCCATTCAATTTTCGAGCAACATAACTACA ATTGATCTTTCCCACAATAATCTTAATGGTTCCATTCCAGGAATTTTCTCTGGCCTTCCT TATCTCCAAAGACTGTCACTTGACGACAACAATTTGACTGGTTCTGTTCCATCTAATATC TGGCAAGATATTGATCTAAGAGGAAATAAAAGTCTTGTACTGGATTTCCAGAACAATGCT CTCAACAATCTGTCAACTCCTCTTTCGCCCCCTCCCAATGTTACCATCCTATTACATGGA AACCCAGTATGCATTGGGCAAAACCAACTGAATATTTCTCAGTATTGTCAGTCAGGAACA TATGTTGCACGTGGAGGTTCAGCAGATAACAGTACAGTTTGTCCACCATGCTCTAGCGAC TTTCCTTTTGAAAGAATACCGATGTCACCAATACCATGCTCATGTGTCGTTCCAGTTTAT GTGGGTTACCGGCTTAAGAGTCCTGGGTTCTCAAATTTCATTCCATACGAATCCCAGTTC CAGCAGTACTTAACATCTGGGCTTTCACTGTCATCGTACCAATTAGAAGTTTCTACTTTT ATGTGGGAAGAAGGCCCAAGGCTGAAGATGGACCTGAAAATATTTCCAAATAACACTCCC TTTTTCACTGTAAGTGAGGTGTTCAGGCTTAATGGTATGTTCACAGCTTGGCAGATTGCA GACTCTGATATATTTGGCCCATATGAACTTATCAGCTTCAACCAAGGGTGGTACAACACA ATAATACCACAGGGTACAAAGTCTGGTCTGAGTACAGGTGCCATTGTTGGGGTGGTCATG GCGGCATTTGTTGCAGCTGCCATTCTTTCATCCCTCGTTACTATCATCATATTGCGGAGA CGCTCAAGACAGTCTTCTTCAAATAAACGCACCGCGAAAAGAATTTCAATGAAAATTGCT GGTGTAAAAGACTTCACTTTTGATGAATTGTCACATTGTACACATGACTTTAATGATTCA ACACTAATTGGCCAAGGAGGGTATGGCAAGGTATACAGAGGTGTGTTGGCTGATGGAATA GTAGTAGCAATAAAGCGAGCACAGCAAGGGTCTCTTCAAGGTTCTAAGGAATTCTTCACA GAGATAGAGTTGCTATCGAGGCTGCATCACCGTAATCTAGTCTCTTTGCTCGGTTATTGT GATGAAGATGATGAACAGGTAGTGCTTTCAAATCCTTTTTCTTTGTTCCCCCCTAAAGAA GACAAATTTTAAACACAATTTCATGTTGGTGATTATTCGATTTGGTTGCTTCTTTTGAAT TGAGTTATGAAAAAGTTGACTTTTTTTTGGTTCTAATGCACTTGTGGAAGGGCACATAAA CACATGTTTCTGCTACCGTCCTATTTCTTGTAGATTGATTCAATGAAGTGTTCATTTCTT AGTTAACAAGCATTCCTTGTTGGTAGGTACTAATGCCTCTTTTGTGTAGAACTTTCTTCT TGATATCCCATCTCCTTGTAAATCATGATGTACATGAAGTTAGTAGTAGGTATACCTTCC ATTCAACATACTATAAAAGTAGCTTGACACTGCTAAGCCTATTTTCAGATGCTGGTTTAC GAGTATATGCCCAATGGAAATCTGCGTGATCATCTTTCAGCTAGAGCTAAGGTGCCTCTA GATTTCCCCATGAGGCTACGGATCGCGCTGGGATCGTCACGTGGTATCCTGTATTTGCAC ACGGAAGCAGATCCTCCAATATACCATCGTGACATCAAAGCCAGCAATATTCTACTGGAC TCGAAGTTTGTCGCAAAGGTTGCTGATTTCGGTCTCTCACGCCTTGCTCCGCTGCCAGAA ACAGAGGGGAGTGCCCCTGGTCATGTCTCCACAGTCGTAAAAGGCACCCCGGGTTATCTT GACCCAGAGTATTTTCTCACCCATAAGCTCACGGACAAGAGCGACGTGTACAGCCTGGGC GTTGTGTTCTTGGAGCTGCTGACTGGGATGCAGCCAATCTCTCATGGAAGGAATATTGTC AGAGAGGTTTTGGCAGCCAATCAGTCAGGGATGATATTCTCGGTGGTGGATAACCGGATG GGCTCGTACCCTGCTGAGTGCGTGGAGAAGTTTGCTGCGCTGGCGCTGCGGTGTTGCCAG GACGAGACGGACTCGAGGCCATCCATGGTGGAGGTGGTTCGGGAGCTGGACATGATATGG CGCATGACGCCGGGGACGGAGAACATTGCATCGTCAGAGTCTGGCGTCATGGGGATGGGC TCCAACAGCACCAGCACACCCACAGCATCGGGGTCTCGGATGGATGATCACTACATTTCG TCCATGGAGGTCTCCGGTAGCAACCTGCTCAGTGGCGTTATGCCCAGCATCAATCCGCGC TGACCTGCTAGTATATGTTGCTGTTCTAGCGGTGTGTATTATAGTTTGGACTCACCACGA CGAGGATGTAGGCTACTTGTGAGCAACCAAACATGTATTCATTCTCTTATCGGGTTCAAT TTTATTGTTGTCAC