Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004526_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:116652453:116655949:-1 gene:Zm00001d004526 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCTTGTGGCCGGCGCCGTGGGCAGCATCATCCGCAAGCTCGGCGAGCTGCTCCTG
GCTGAGTACCAGCTGCAGGCGTGCCTGCCGGAGGAAATCGAGTCTCTGAAAAATGAGCTC
GAGAGCGCGCACGTGGCTCTCCGCACCGTGGCGGAGGTGCCGCCGGAGCATCTTGATCAA
CAGGTCCAGCTCTGGGCTCGCGAGGTCAGGGAGGCGTCGTACGACATGGAGGACATCCTC
GATACCTTCCTCGTCAACGACGCACCGGCTGAGAAAAAGGATGGCCTCGGCAAACGTCGT
CGTCTTGGTCGTCGTCTCCTGGACAATATAGCTGGCGCCATGGAAAAGATGAGGAAGCTG
TTCAAAAAGAGCAAGGAGTGTCACACCATAGCTGGCGCCATAGAGAAGATGAAGGAACGG
CTCCGGGAGGTGGCTGACCGCCGCGACAGGTACGCCGTTCCGGTGGCAGCGCCTGCGCCG
GCGAGGACGCTGGATCCTCGCCTCGCATACATGCACAGGGAAGCGGCACAGCTGGTCGGC
ATGGACAGGTCCAAGGCTGAGGTCATGGCCATGCTTCTGCCGCTGCCGTCGTCCCGCTGC
CCCGAGGACGACATCGACGTCTCTGCCAGTGGCGGTGACAAGATGAAGATAGTTTCTGTG
GTCGGAGCTGGTGGCCTGGGAAAGACCACTCTTGCCAAGGCCGTCTACGACGAGCTCAAA
CCGCGATATGACTATGAAGCGTTTGTTTCGGTTGGCCGGAAACCTGACCTGGTGCAAGTC
TTTACCAGCATCTTCTTCCGTCTCGACGTACATAAGCACGAGGCCATTCGTGAAGTAAAG
GACCTACAGCTGTTGACCGACGGACTACGAACATTTCTACAAGACAAGAGGTACTTGATC
GTTATCGACGACGTTTGGGATACAGAATCTTGGGAAACAATCAAATTAGCTTTTGATCAG
AAGAATAAGCAGAGTAGGGTAATCACAACCACTCGCAACCGACAAGTAGCTTCCAGCGAG
AAGGTTTACGAGCTACATCCGCTCCCTCATGACAGCTCGAAGAAGCTATTTTATATGAGG
CTGTTTGGGGGTGAGGACAAATGTCCGGCTAATCATCCTGAAGAGGCGTCTCAAAGGATT
CTTAACAAATGTGGCGGTGTACCATTGGCTATCATCACAATGGCAAGCTTGCTGGTGGGT
AAATCGAGAGAAGACTGGTTGGAGGTGTGCAGCTCTCGCGGTTTCTACCGCGGCGGCGGT
AAAGATAACAACAAACAAGTAGATGACACCGTGTGGATACTGTCTCTGAGCTATTATGAC
CTACCTTCATATCTGAAGCCTTGCTTACTGTACCTAAGTGTGTATCCAGAAGACTATGAG
GTCGAGAGGGAGAGATTGATATGGAAGTGGGTAGCTGAAGGTTTCATCGAGAAGAAAGCA
GGAAGCAGCAGCAGCCTGTTTGAGCAGGGAGAGGAATACTTCCATGAGCTCATAAACAGA
TGCATGATCCAGGCGGTGGGGGACGACAAAGAGGTTGCTGACGCCATATTTGGTTGTCGT
GTTCATGACATGGTGCTTGATCTCATCCGTGACATATCAAACGAAGAAAACTTCATCACT
GTCTCATACGATGATGGTAGAAGAGGCGCAACGTCGTCGTCGTCGTCACGACACGTGGTG
CGCCGGTTAGCTCACCAAAACAGAAGAATAACGGAGGAGGACAACCCTGTGAGTGGCAGC
ATGAGGTCACTGGTTGCCTGTGGGTGTGATATGGATGGTTGGGTCTTGCACACGAGCTCT
AATAAGCTGCTGCGTGTGCTAGCTTTAGAGAAATGCACGCCACCATCTATGGACATCGGA
CATCTTGGAAAACTGCTTCATTTGAGGTACCTTGGGTTACATGGTACTCGCATCAAGACA
CTCCCAGAGGAAATAGGATCCCTCAAGTTTCTGCAAGCACTGGATTTAGAGGACACTAAA
ATATCACGGCTTCCACAGACTGTTTGCCTGCTAACACAGCTGATGTACCTACGCGGTGCA
ACCGGGGTCACAACATTGCCTGATGGTTTCTTGGGGCAGGTGACGTCACTAGAGGAGCTC
CATATATGTCTTCCCACCAAAGATGACGAGTACAGCCAGAAGAAGTTCATGCAGGATATG
GGCAAGCAGGGAGAAATCAGGATGCTCGTTTTGTATGGGAACAGAATTGAGTTGGATCCG
TGGATGCAGTCCAGTCTAGTGCAATCACTAGGCGGTCTGTACAAGCTCCAGACCCTTGTG
GTGAGGCATTATGCAGATGGGGTAGCAGCAGCACAGGGCAGCTGGGACACGGCGAAGCTT
CGGCGACGTCTCCGGATTTTGAACTTAGATGTCCTCCGGTTCCATCGTGTACCATCGTGC
ATCGATCCCGCGCGCCTCCCCAACCTCTCACACCTACAACTGCTTGTGGTTCATCTGGAC
GAGGCAGGTCTGAGAGCACTGGGCGGCCTGCCAGAGCTCACCTACCTCGCGCTGTCGTTG
AAGCCTCGTTCGCTGAACAGCTCATCATGCAAGGCTACGGTAGCTGATGTTGTTGCCGCA
GATGGCTTCTTCCTCAAGTTGAGATCGCTCAAGCTGTATGGCTGGATGGTCCAGTTGGTG
CCCAGCGAGGACTCGGCAAGTGTTTCGCTCAGCATCTGGAATGAAGGAGCGGAGGGTTCC
ACGAGAGACTGCACCGCCGGGAGGGTAGCACCTGCTATCATGCCAGACCTCATACATCTG
GAGTTCAATGTCCCTATCGCAGCCTTGTATAAGATAACAAATAATGGATGCAGCTGTTAC
AGCCTCGGCTGGGAGTGCCTCCCTTCGCTACACAAAATCAAGGCGCTTGTCGACTATGAC
GGCACCTACACTGCTGATTTCGAGAAGCCAGTGGCTGAGATGATGCAGGCAGCAAAACTT
CATCCCAACCAACCCATAATTGAGATGGTTACTCAATTATAA

Peptide Sequence

PEP ID

Zm00001d004526_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:116652453:116655949:-1 gene:Zm00001d004526 transcript:Zm00001d004526_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLVAGAVGSIIRKLGELLLAEYQLQACLPEEIESLKNELESAHVALRTVAEVPPEHLDQ
QVQLWAREVREASYDMEDILDTFLVNDAPAEKKDGLGKRRRLGRRLLDNIAGAMEKMRKL
FKKSKECHTIAGAIEKMKERLREVADRRDRYAVPVAAPAPARTLDPRLAYMHREAAQLVG
MDRSKAEVMAMLLPLPSSRCPEDDIDVSASGGDKMKIVSVVGAGGLGKTTLAKAVYDELK
PRYDYEAFVSVGRKPDLVQVFTSIFFRLDVHKHEAIREVKDLQLLTDGLRTFLQDKRYLI
VIDDVWDTESWETIKLAFDQKNKQSRVITTTRNRQVASSEKVYELHPLPHDSSKKLFYMR
LFGGEDKCPANHPEEASQRILNKCGGVPLAIITMASLLVGKSREDWLEVCSSRGFYRGGG
KDNNKQVDDTVWILSLSYYDLPSYLKPCLLYLSVYPEDYEVERERLIWKWVAEGFIEKKA
GSSSSLFEQGEEYFHELINRCMIQAVGDDKEVADAIFGCRVHDMVLDLIRDISNEENFIT
VSYDDGRRGATSSSSSRHVVRRLAHQNRRITEEDNPVSGSMRSLVACGCDMDGWVLHTSS
NKLLRVLALEKCTPPSMDIGHLGKLLHLRYLGLHGTRIKTLPEEIGSLKFLQALDLEDTK
ISRLPQTVCLLTQLMYLRGATGVTTLPDGFLGQVTSLEELHICLPTKDDEYSQKKFMQDM
GKQGEIRMLVLYGNRIELDPWMQSSLVQSLGGLYKLQTLVVRHYADGVAAAQGSWDTAKL
RRRLRILNLDVLRFHRVPSCIDPARLPNLSHLQLLVVHLDEAGLRALGGLPELTYLALSL
KPRSLNSSSCKATVADVVAADGFFLKLRSLKLYGWMVQLVPSEDSASVSLSIWNEGAEGS
TRDCTAGRVAPAIMPDLIHLEFNVPIAALYKITNNGCSCYSLGWECLPSLHKIKALVDYD
GTYTADFEKPVAEMMQAAKLHPNQPIIEMVTQL

Transcript Sequence

Transcript ID

Zm00001d004526_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:116652453:116655949:-1 gene:Zm00001d004526 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGCAGCGGCTAGCTAGCTCCACGGCTTCGTCGCCATGGATCTTGTGGCCGGCGCCGTGG
GCAGCATCATCCGCAAGCTCGGCGAGCTGCTCCTGGCTGAGTACCAGCTGCAGGCGTGCC
TGCCGGAGGAAATCGAGTCTCTGAAAAATGAGCTCGAGAGCGCGCACGTGGCTCTCCGCA
CCGTGGCGGAGGTGCCGCCGGAGCATCTTGATCAACAGGTCCAGCTCTGGGCTCGCGAGG
TCAGGGAGGCGTCGTACGACATGGAGGACATCCTCGATACCTTCCTCGTCAACGACGCAC
CGGCTGAGAAAAAGGATGGCCTCGGCAAACGTCGTCGTCTTGGTCGTCGTCTCCTGGACA
ATATAGCTGGCGCCATGGAAAAGATGAGGAAGCTGTTCAAAAAGAGCAAGGAGTGTCACA
CCATAGCTGGCGCCATAGAGAAGATGAAGGAACGGCTCCGGGAGGTGGCTGACCGCCGCG
ACAGGTACGCCGTTCCGGTGGCAGCGCCTGCGCCGGCGAGGACGCTGGATCCTCGCCTCG
CATACATGCACAGGGAAGCGGCACAGCTGGTCGGCATGGACAGGTCCAAGGCTGAGGTCA
TGGCCATGCTTCTGCCGCTGCCGTCGTCCCGCTGCCCCGAGGACGACATCGACGTCTCTG
CCAGTGGCGGTGACAAGATGAAGATAGTTTCTGTGGTCGGAGCTGGTGGCCTGGGAAAGA
CCACTCTTGCCAAGGCCGTCTACGACGAGCTCAAACCGCGATATGACTATGAAGCGTTTG
TTTCGGTTGGCCGGAAACCTGACCTGGTGCAAGTCTTTACCAGCATCTTCTTCCGTCTCG
ACGTACATAAGCACGAGGCCATTCGTGAAGTAAAGGACCTACAGCTGTTGACCGACGGAC
TACGAACATTTCTACAAGACAAGAGGTACTTGATCGTTATCGACGACGTTTGGGATACAG
AATCTTGGGAAACAATCAAATTAGCTTTTGATCAGAAGAATAAGCAGAGTAGGGTAATCA
CAACCACTCGCAACCGACAAGTAGCTTCCAGCGAGAAGGTTTACGAGCTACATCCGCTCC
CTCATGACAGCTCGAAGAAGCTATTTTATATGAGGCTGTTTGGGGGTGAGGACAAATGTC
CGGCTAATCATCCTGAAGAGGCGTCTCAAAGGATTCTTAACAAATGTGGCGGTGTACCAT
TGGCTATCATCACAATGGCAAGCTTGCTGGTGGGTAAATCGAGAGAAGACTGGTTGGAGG
TGTGCAGCTCTCGCGGTTTCTACCGCGGCGGCGGTAAAGATAACAACAAACAAGTAGATG
ACACCGTGTGGATACTGTCTCTGAGCTATTATGACCTACCTTCATATCTGAAGCCTTGCT
TACTGTACCTAAGTGTGTATCCAGAAGACTATGAGGTCGAGAGGGAGAGATTGATATGGA
AGTGGGTAGCTGAAGGTTTCATCGAGAAGAAAGCAGGAAGCAGCAGCAGCCTGTTTGAGC
AGGGAGAGGAATACTTCCATGAGCTCATAAACAGATGCATGATCCAGGCGGTGGGGGACG
ACAAAGAGGTTGCTGACGCCATATTTGGTTGTCGTGTTCATGACATGGTGCTTGATCTCA
TCCGTGACATATCAAACGAAGAAAACTTCATCACTGTCTCATACGATGATGGTAGAAGAG
GCGCAACGTCGTCGTCGTCGTCACGACACGTGGTGCGCCGGTTAGCTCACCAAAACAGAA
GAATAACGGAGGAGGACAACCCTGTGAGTGGCAGCATGAGGTCACTGGTTGCCTGTGGGT
GTGATATGGATGGTTGGGTCTTGCACACGAGCTCTAATAAGCTGCTGCGTGTGCTAGCTT
TAGAGAAATGCACGCCACCATCTATGGACATCGGACATCTTGGAAAACTGCTTCATTTGA
GGTACCTTGGGTTACATGGTACTCGCATCAAGACACTCCCAGAGGAAATAGGATCCCTCA
AGTTTCTGCAAGCACTGGATTTAGAGGACACTAAAATATCACGGCTTCCACAGACTGTTT
GCCTGCTAACACAGCTGATGTACCTACGCGGTGCAACCGGGGTCACAACATTGCCTGATG
GTTTCTTGGGGCAGGTGACGTCACTAGAGGAGCTCCATATATGTCTTCCCACCAAAGATG
ACGAGTACAGCCAGAAGAAGTTCATGCAGGATATGGGCAAGCAGGGAGAAATCAGGATGC
TCGTTTTGTATGGGAACAGAATTGAGTTGGATCCGTGGATGCAGTCCAGTCTAGTGCAAT
CACTAGGCGGTCTGTACAAGCTCCAGACCCTTGTGGTGAGGCATTATGCAGATGGGGTAG
CAGCAGCACAGGGCAGCTGGGACACGGCGAAGCTTCGGCGACGTCTCCGGATTTTGAACT
TAGATGTCCTCCGGTTCCATCGTGTACCATCGTGCATCGATCCCGCGCGCCTCCCCAACC
TCTCACACCTACAACTGCTTGTGGTTCATCTGGACGAGGCAGGTCTGAGAGCACTGGGCG
GCCTGCCAGAGCTCACCTACCTCGCGCTGTCGTTGAAGCCTCGTTCGCTGAACAGCTCAT
CATGCAAGGCTACGGTAGCTGATGTTGTTGCCGCAGATGGCTTCTTCCTCAAGTTGAGAT
CGCTCAAGCTGTATGGCTGGATGGTCCAGTTGGTGCCCAGCGAGGACTCGGCAAGTGTTT
CGCTCAGCATCTGGAATGAAGGAGCGGAGGGTTCCACGAGAGACTGCACCGCCGGGAGGG
TAGCACCTGCTATCATGCCAGACCTCATACATCTGGAGTTCAATGTCCCTATCGCAGCCT
TGTATAAGATAACAAATAATGGATGCAGCTGTTACAGCCTCGGCTGGGAGTGCCTCCCTT
CGCTACACAAAATCAAGGCGCTTGTCGACTATGACGGCACCTACACTGCTGATTTCGAGA
AGCCAGTGGCTGAGATGATGCAGGCAGCAAAACTTCATCCCAACCAACCCATAATTGAGA
TGGTTACTCAATTATAAGAAGCCTGGAAAACTGCCATTTAATACTGGTTTTAGCAACCGG
ATGAAAAGGCCGCTAATTTCCCACTAGATATATTCCATTTCCTTGCTTTTCGACAGCTTG
GTGTTGTATGTCAAATTATTAAGCAGCTTTGTAATAAGACTGTGTGGTGCCACTTTAGGC
GCATGATGCTTGTTCCTAAACAAACATGAAGTAATCTCTTGGTATTGTAGAGTGTATCAG
TGTAAACAGCAGATTGGTTCAATTCAATACAATTCAATGT