Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004477_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:2:114362463:114365356:1 gene:Zm00001d004477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS31A
Sequence

ATGAGGCCGGTCTTCGTGGGGAACCTGGACTATGACACCCGCCACTCGGAGCTCGACCGC
CTCTTCTACCGCTACGGCAGGGTCGAGCGCATCGACATCAAGTCAGGTCTGCCTGCCCTT
GCATTCCCTCCTTTTGCCCACCCCCTTGTTTATCTTCGTCTTCGGCCGGTTTTAGATTCG
ATCTCATCTTATTGTGTACCTAGCCACTTGGTGCAGTACATTTCTGATTATTTTAGGCTT
GGGTATACTCATGTGTTGAGTTGCTATGCTTTTGTCTACTTTGAGGATGAACGTGATGGC
AATGATGCTATACGGGCTCTTGATGGTTATCCATTTGGCCCTGGCAGACGCAGGCTTTCA
GTAGAGTGGTCACGGGGTGAGCAAGCTGGTAGACGTGATGGCAACAAACCAGAAGCAAAT
ACTAAGCCAACTAGGACACTGTTTGTCATTAACTTTGATCCAATGAACACAAGAGTCAGT
GACATCGAAAGGCACTTCACACCATTTGGGAACATATCAAGTGTTCGGATAAGGAAGAAC
TTTGCTTTTGTTCAGTTTGAAACTATGGAAGAAGCAAGAAAGGCTCTTGAAGCTACTCAT
GCTACCACCCTTTTGGACAGGGTGATTTCTGTCGAGTACGCCTTCAGGGATGATAGTGAA
GTGAGTGATAGGTACGGCAGCCCAAGAAGAGGTGGTGGCTATGGTAGGCGGGGTGATAGC
CCAGTGTACCGGTCACGTCCTAGTCCAGACTATGGTCGCCCAGCAAGTCCTGTATATGGT
TCATATGACGGTCCTGGTCCTGTTCGTGATCGCTATCGGAGATCTCCTGCTTATCGATCA
AGGTCCCCACCTGCGAAACGAAGAGCATATGACTAA

Peptide Sequence

PEP ID

Zm00001d004477_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:2:114362463:114365356:1 gene:Zm00001d004477 transcript:Zm00001d004477_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS31A
Sequence

MRPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKSGLPALAFPPFAHPLVYLRLRPVLDS
ISSYCVPSHLVQYISDYFRLGYTHVLSCYAFVYFEDERDGNDAIRALDGYPFGPGRRRLS
VEWSRGEQAGRRDGNKPEANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIRKN
FAFVQFETMEEARKALEATHATTLLDRVISVEYAFRDDSEVSDRYGSPRRGGGYGRRGDS
PVYRSRPSPDYGRPASPVYGSYDGPGPVRDRYRRSPAYRSRSPPAKRRAYD

Transcript Sequence

Transcript ID

Zm00001d004477_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:114362463:114365356:1 gene:Zm00001d004477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor RS31A
Sequence

ATGAGGCCGGTCTTCGTGGGGAACCTGGACTATGACACCCGCCACTCGGAGCTCGACCGC
CTCTTCTACCGCTACGGCAGGGTCGAGCGCATCGACATCAAGTCAGGTCTGCCTGCCCTT
GCATTCCCTCCTTTTGCCCACCCCCTTGTTTATCTTCGTCTTCGGCCGGTTTTAGATTCG
ATCTCATCTTATTGTGTACCTAGCCACTTGGTGCAGTACATTTCTGATTATTTTAGGCTT
GGGTATACTCATGTGTTGAGTTGCTATGCTTTTGTCTACTTTGAGGATGAACGTGATGGC
AATGATGCTATACGGGCTCTTGATGGTTATCCATTTGGCCCTGGCAGACGCAGGCTTTCA
GTAGAGTGGTCACGGGGTGAGCAAGCTGGTAGACGTGATGGCAACAAACCAGAAGCAAAT
ACTAAGCCAACTAGGACACTGTTTGTCATTAACTTTGATCCAATGAACACAAGAGTCAGT
GACATCGAAAGGCACTTCACACCATTTGGGAACATATCAAGTGTTCGGATAAGGAAGAAC
TTTGCTTTTGTTCAGTTTGAAACTATGGAAGAAGCAAGAAAGGCTCTTGAAGCTACTCAT
GCTACCACCCTTTTGGACAGGGTGATTTCTGTCGAGTACGCCTTCAGGGATGATAGTGAA
GTGAGTGATAGGTACGGCAGCCCAAGAAGAGGTGGTGGCTATGGTAGGCGGGGTGATAGC
CCAGTGTACCGGTCACGTCCTAGTCCAGACTATGGTCGCCCAGCAAGTCCTGTATATGGT
TCATATGACGGTCCTGGTCCTGTTCGTGATCGCTATCGGAGATCTCCTGCTTATCGATCA
AGGTCCCCACCTGCGAAACGAAGAGCATATGACTAATCGAGAACCCTCTGTTATGCCATA
TATGGCCTAGGAACACCCTGTAGCAAGAACTTACTGTACCTGTACCGGAGCGTCACCTTA
ATGTCCTTAAATTCCCGTGTTTAATGGTCTGTACATGGTTATGCTATGCGACTGTCAGGT
TTCACTGCATGCAATATTGTCATTTGGCTGCTACCCTTTGTTTGGCCTTGGGATGCTCGA
TCTCTATTTTCAGAT