Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004473_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:114085506:114089423:-1 gene:Zm00001d004473 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
Sequence	ATGGCGGCCGCGTCCTTCACCGCCGCCAAGTTCCTGGCGCCGGTGGCCGCGAGATCCGGC GGAGAGAGGGCGCCCCCGCTCCCCGCCGGCGCCTCGTCCTCCTCCTTCGCCAGGACCCTG CGCCGCGGCGCGGTGCACCACCCGCGCCTGCGCACCGCGCTCGCCGTCTCCTCCGACCTG CTCGCTGGGAACAAGGCCGCGCAGGCCGCCGCCGCGCATCCGGCGGTTACCCGGGAAGAG GCACTGGAGCTGTATGAGGACATGGTTCTTGGCCGTGTATTCGAGGACATGTGTGCACAA ATGTACTACCGTGGCAAGATGTTTGGTTTCGTCCACCTTTACAATGGCCAGGAGGCTGTC TCCACTGGCTTCATCAAACTTCTGAACCAAGCTGACTGTGTTGTTAGCACATACCGTGAT CATGTCCATGCGCTGTCCAAGGGTGTCCCGGCACGTTCTGTCATGGCTGAGCTCTTTGGC AAGGCCACAGGCTGCTGCCGTGGACAGGGTGGTTCCATGCACATGTTCTCTGCTCCCCAC AACCTCCTGGGAGGCTTTGCCTTCATCGGAGAGGGCATTCCTGTTGCCACTGGTGCAGCC TTTGCTGCTAAGTACCGTCATGAGGTGCTCAAGGAGTCTGGCCCTGATGGGCTTGATGTC ACATTGGCGTTCTTTGGCGATGGTACCTGTAATAATGGCCAGTTCTTTGAGTGTCTGAAC ATGGCACAGCTTTGGAAGCTTCCTATTGTGTTTGTTGTGGAGAATAACCTGTGGGCAATT GGAATGTCACACATTAGGGCTACATCGGACCCAGAGATTTGGAAGAAGGGGCCAGCATTT GGAATGCCTGGGGTGCATGTTGATGGTATGGATGTCCTGAAGGTCAGGGAGGTTGCTAAG GAGGCAATTGAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTGTGAAACATAC AGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGATGAGAAAACA CACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGAGCAGAACCTC GCAACCGAATCCGAGCTGAAGAGCATCGAGAAGAAGATCGACGATGTCGTTGAGGAGGCT GTCGAGTTTGCTGACGCGAGCCCGCATCCGCCGCGCAGCCAGCTGTTGGAGAACGTGTTT GCCGACCCCAAAGGCTTTGGTATCGGCCCCGATGGTAAGTACAGGTGCGAGGATCCCAAG TTCACCCAAGGCACCGCCCAAGTTTAA

Peptide Sequence

PEP ID	Zm00001d004473_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:114085506:114089423:-1 gene:Zm00001d004473 transcript:Zm00001d004473_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
Sequence	MAAASFTAAKFLAPVAARSGGERAPPLPAGASSSSFARTLRRGAVHHPRLRTALAVSSDL LAGNKAAQAAAAHPAVTREEALELYEDMVLGRVFEDMCAQMYYRGKMFGFVHLYNGQEAV STGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSAPH NLLGGFAFIGEGIPVATGAAFAAKYRHEVLKESGPDGLDVTLAFFGDGTCNNGQFFECLN MAQLWKLPIVFVVENNLWAIGMSHIRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAK EAIERARRGEGPTLVECETYRFRGHSLADPDELRKPDEKTHYAARDSITALKKYIIEQNL ATESELKSIEKKIDDVVEEAVEFADASPHPPRSQLLENVFADPKGFGIGPDGKYRCEDPK FTQGTAQV

Transcript Sequence

Transcript ID	Zm00001d004473_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:114085506:114089423:-1 gene:Zm00001d004473 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
Sequence	GTGGTGAGCTGAGCTGGGCGGACCCTCCAAAGCCCGAGCGTGAGCGCCATCGTCCACCGA GGCCTTGCCTGCCTGCCTTGTTTCCCCAACCCCCTCGGACCCTCACATCTTCCTCGGTCT CTCCGCCGCCCACCACCTCCCTCCCCCTCCTCTCTTTATACGCCACCGCGGCGGGGCTTC CCCCATCCCTTGTCCGTTCGCTGCATTGCTCCCCTAACCGTTCGGCCAGGAGACAGCGGA GAGGGCAGAGATGGCGGCCGCGTCCTTCACCGCCGCCAAGTTCCTGGCGCCGGTGGCCGC GAGATCCGGCGGAGAGAGGGCGCCCCCGCTCCCCGCCGGCGCCTCGTCCTCCTCCTTCGC CAGGACCCTGCGCCGCGGCGCGGTGCACCACCCGCGCCTGCGCACCGCGCTCGCCGTCTC CTCCGACCTGCTCGCTGGGAACAAGGCCGCGCAGGCCGCCGCCGCGCATCCGGCGGTTAC CCGGGAAGAGGCACTGGAGCTGTATGAGGACATGGTTCTTGGCCGTGTATTCGAGGACAT GTGTGCACAAATGTACTACCGTGGCAAGATGTTTGGTTTCGTCCACCTTTACAATGGCCA GGAGGCTGTCTCCACTGGCTTCATCAAACTTCTGAACCAAGCTGACTGTGTTGTTAGCAC ATACCGTGATCATGTCCATGCGCTGTCCAAGGGTGTCCCGGCACGTTCTGTCATGGCTGA GCTCTTTGGCAAGGCCACAGGCTGCTGCCGTGGACAGGGTGGTTCCATGCACATGTTCTC TGCTCCCCACAACCTCCTGGGAGGCTTTGCCTTCATCGGAGAGGGCATTCCTGTTGCCAC TGGTGCAGCCTTTGCTGCTAAGTACCGTCATGAGGTGCTCAAGGAGTCTGGCCCTGATGG GCTTGATGTCACATTGGCGTTCTTTGGCGATGGTACCTGTAATAATGGCCAGTTCTTTGA GTGTCTGAACATGGCACAGCTTTGGAAGCTTCCTATTGTGTTTGTTGTGGAGAATAACCT GTGGGCAATTGGAATGTCACACATTAGGGCTACATCGGACCCAGAGATTTGGAAGAAGGG GCCAGCATTTGGAATGCCTGGGGTGCATGTTGATGGTATGGATGTCCTGAAGGTCAGGGA GGTTGCTAAGGAGGCAATTGAGAGGGCAAGGAGAGGTGAAGGGCCAACCCTAGTCGAGTG TGAAACATACAGGTTCCGGGGTCACTCCCTTGCAGACCCAGATGAGCTCAGGAAGCCTGA TGAGAAAACACACTACGCCGCAAGGGATTCTATCACGGCCTTGAAGAAGTACATCATAGA GCAGAACCTCGCAACCGAATCCGAGCTGAAGAGCATCGAGAAGAAGATCGACGATGTCGT TGAGGAGGCTGTCGAGTTTGCTGACGCGAGCCCGCATCCGCCGCGCAGCCAGCTGTTGGA GAACGTGTTTGCCGACCCCAAAGGCTTTGGTATCGGCCCCGATGGTAAGTACAGGTGCGA GGATCCCAAGTTCACCCAAGGCACCGCCCAAGTTTAAGGAGGTTAATCTGCGCTCTGTAC CACTGTACTTGGGTTCTCTAGTTTTGTCGATCCAGTGTCATGTTAAGGATACTGTATGCA TAAGGTGGTCCATTTCTTTGGCTCTTAGGATTGTGTCTGATACTGTTGTGTAATTTATTC GAATGCTCAACTGATGCCCAGGTTTTATGATACGTTCCGGAGCTTAACTTGTTCAGGAAC AGCTCAGTTTCTACTCTATAGAAGTATGTAGAATGGTTTTGGGGTAGTAAGGCCTTGTTT GTTTACCCCATAAATTATATAATCC