Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004448_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:112706664:112712176:-1 gene:Zm00001d004448 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 8
Sequence	ATGGCAGAGGCAGACTGTTCCGCGGCGAGGACCAGGACGGCGGGGCTCGCCGCCGCCGCC GCCGCGGCGGCGTTCCTCGTGCTCGTGGTGGTCGCCGGCAGCGCGGTGCTCCCTGGCGCG CGGGTGAGGGTCCTCGACGGCCTCCGGGGCAGGGCCGACGACGGCGACGCCGGCGGGCCA TCGAGGGCCGTCACCGGCGCGGTGGAGGATCCGGAGGCCGTGGCCAACGACGTGCACGTG TCCATCAGGAACAGCACGGCCCGGCGAAACCTCGGGTACCTGTCGTGCGGGACAGGCAAC CCGATCGACGACTGCTGGCGCTGCGACTCGGACTGGCACAGCAACCGGCAGCGGCTGGCC GACTGCGGCATCGGGTTCGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGGTGTACGTG GTGACGGACCCGAGCGACGACGATCCCGTGAACCCGCGCGAGGGCACCCTCCGGCACGCC GTCATCCAGGAGGAGCCGCTGTGGATCATCTTCAAGCGGGACATGGTGATCACGCTGAGG GAGGAGCTCATCATGAACAGCTTCAAGACCATCGACGGGCGCGGCGCCAACGTGCACATC GCCAACGGCGCCTGCGTCACCATCCAGTACGTGACCAACGTCATCATCCACGGGCTCCAC ATCCACGACTGCAGGCCCACGGGGAACGCCATGGTGCGCAGCTCCCCGAGCCACTACGGC TGGCGCACCATGGCCGACGGGGACGGCGTGTCCATCTTCGGTTCCAGCCACGTCTGGGTG GACCACTGCTCGCTCTCCAACTGCGCCGACGGCCTCATCGACGCCATCATGGGATCCACG GCCATCACTCTGTCCAACAACTACTTCACCCACCACAACGAGGTGATGCTCCTGGGCCAC AGTGACTCCTATGTGAAGGACAAGGCGATGCAGGTCACGATAGCCTTCAACCATTTCGGC GAAGGCCTCATTCAGAGAATGCCAAGGTGCCGGCACGGCTACTTCCACGTTGTGAACAAC GACTACACCCACTGGGAGATGTACGCCATTGGGGGCAGCGCGGAGCCAACCATCAACAGC CAGGGCAACCGCTACCTTGCTCCGACGAACCCGTTCGCCAAGGAGGTGACCAAGAGGGTG GAGACTGCCCAGACCGTGTGGAAGAGCTGGAACTGGAGGTCAGAGGGCGACCTGCTGCTG AACGGCGCCTACTTCACCCCGTCCGGCGCGGGCGCCTCGGCCAGCTACTCGCGCGCGTCC AGCCTCGGCGCCAAGTCGTCGTCCATGGTCGGCACCATCACCTCGGACGCCGGCGCACTG TCGTGCCGCAAGGGCGCGGCCTGCTAG

Peptide Sequence

PEP ID	Zm00001d004448_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:112706664:112712176:-1 gene:Zm00001d004448 transcript:Zm00001d004448_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 8
Sequence	MAEADCSAARTRTAGLAAAAAAAAFLVLVVVAGSAVLPGARVRVLDGLRGRADDGDAGGP SRAVTGAVEDPEAVANDVHVSIRNSTARRNLGYLSCGTGNPIDDCWRCDSDWHSNRQRLA DCGIGFGRNAIGGRDGKVYVVTDPSDDDPVNPREGTLRHAVIQEEPLWIIFKRDMVITLR EELIMNSFKTIDGRGANVHIANGACVTIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYG WRTMADGDGVSIFGSSHVWVDHCSLSNCADGLIDAIMGSTAITLSNNYFTHHNEVMLLGH SDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINS QGNRYLAPTNPFAKEVTKRVETAQTVWKSWNWRSEGDLLLNGAYFTPSGAGASASYSRAS SLGAKSSSMVGTITSDAGALSCRKGAAC

Transcript Sequence

Transcript ID	Zm00001d004448_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:112706664:112712176:-1 gene:Zm00001d004448 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectate lyase 8
Sequence	TCGCTTCCACCACCGTCCTCCGCCTCCGCCTCCGCCCCGCGCCCAGCACTCGTCCCTTGC TTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGCACCCACGCACGCAGTTT GAGAGGGTGTGCGGCGCTCGAGGGGCGAGGAGCGGGGTGGGTCATGGCAGAGGCAGACTG TTCCGCGGCGAGGACCAGGACGGCGGGGCTCGCCGCCGCCGCCGCCGCGGCGGCGTTCCT CGTGCTCGTGGTGGTCGCCGGCAGCGCGGTGCTCCCTGGCGCGCGGGTGAGGGTCCTCGA CGGCCTCCGGGGCAGGGCCGACGACGGCGACGCCGGCGGGCCATCGAGGGCCGTCACCGG CGCGGTGGAGGATCCGGAGGCCGTGGCCAACGACGTGCACGTGTCCATCAGGAACAGCAC GGCCCGGCGAAACCTCGGGTACCTGTCGTGCGGGACAGGCAACCCGATCGACGACTGCTG GCGCTGCGACTCGGACTGGCACAGCAACCGGCAGCGGCTGGCCGACTGCGGCATCGGGTT CGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGGTGTACGTGGTGACGGACCCGAGCGA CGACGATCCCGTGAACCCGCGCGAGGGCACCCTCCGGCACGCCGTCATCCAGGAGGAGCC GCTGTGGATCATCTTCAAGCGGGACATGGTGATCACGCTGAGGGAGGAGCTCATCATGAA CAGCTTCAAGACCATCGACGGGCGCGGCGCCAACGTGCACATCGCCAACGGCGCCTGCGT CACCATCCAGTACGTGACCAACGTCATCATCCACGGGCTCCACATCCACGACTGCAGGCC CACGGGGAACGCCATGGTGCGCAGCTCCCCGAGCCACTACGGCTGGCGCACCATGGCCGA CGGGGACGGCGTGTCCATCTTCGGTTCCAGCCACGTCTGGGTGGACCACTGCTCGCTCTC CAACTGCGCCGACGGCCTCATCGACGCCATCATGGGATCCACGGCCATCACTCTGTCCAA CAACTACTTCACCCACCACAACGAGGTGATGCTCCTGGGCCACAGTGACTCCTATGTGAA GGACAAGGCGATGCAGGTCACGATAGCCTTCAACCATTTCGGCGAAGGCCTCATTCAGAG AATGCCAAGGTGCCGGCACGGCTACTTCCACGTTGTGAACAACGACTACACCCACTGGGA GATGTACGCCATTGGGGGCAGCGCGGAGCCAACCATCAACAGCCAGGGCAACCGCTACCT TGCTCCGACGAACCCGTTCGCCAAGGAGGTGACCAAGAGGGTGGAGACTGCCCAGACCGT GTGGAAGAGCTGGAACTGGAGGTCAGAGGGCGACCTGCTGCTGAACGGCGCCTACTTCAC CCCGTCCGGCGCGGGCGCCTCGGCCAGCTACTCGCGCGCGTCCAGCCTCGGCGCCAAGTC GTCGTCCATGGTCGGCACCATCACCTCGGACGCCGGCGCACTGTCGTGCCGCAAGGGCGC GGCCTGCTAGCGCGGATCGCGCTCCCTCTCCAGCAACAGGAAAAGAAACAGGACAACAGG AAACTAAGCCACCTCAACACCACCACCACCATGGTTACAGTTTCTTCTTCCCTTCTTTTT AGGGGTCGCTTTTGACAAGGGTTATATTATATATATATATGATGGTCCTCCTTGATATTT TCACCATTTGCTCAACCTCCCCCCTGCTCCCGACATGGAAAGCTACCTGGAGCAGCAGGC GTGAAGCGTTGCTGATTGGTCGCTCGGTCTCTCTATTAGTCGTCTGATCTGAGTGTTGCG TGTTGTTCCCTCTGCCTACAAGCAAGTGGTGTATGTTGAGGGCAGGGGGTGCGTGCGTGC GTGTTGTGTGTGATACTTACTCACTTGGTTGTTGTGTTGAGAAAAAAAGGGTCAGATTGT TAGTAGTGGTAGTACTACATGTTACGCCTGGACAGACTGGGATGGAATGGATGTACAAGA CATGGAGGAATACCCATGTTCTTAACTCTTCTTCTTCTTCAGTGAAAAAAGCTAAAACGT TACAGTTTAGCTGAAT