Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004400_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:109230530:109236830:-1 gene:Zm00001d004400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDT1-like protein 2 chloroplastic
Sequence

ATGCTGGCAAAATCAGGTTTCACGGCGGCATTTACACTGATTTTTGTATCTGAGATTGGA
GATAAGACGTTTTTCATTGCTGCACTACTCGCGATGCAGTATCAAAGAGCACTGGTTTTA
CTTGGGTCAATGGCTGCTCTCTCCCTGATGACTATTGTGAGTGTTATAATTGGACGGATT
TTCCAGTCTGTGCCAGCACAGTTCCAAACAACGCTACCCATAGGAGAGTATTCTGCAGTT
GCTCTGCTGGCATTCTTTGGTTTCAAGTCAATAAAAGATGCATTAGCACTTCCTGATAAT
GCCAACGGGAACCTTCAAGGGAATTCAGAAAGTGGAGAACTGGCTGAGGCCGAGGAGCTT
GTCAAGGAAAAGGTCTCTAAAAATCTCACCAGCCCTCTTGAAGTCCTTTGGAAGTCCTTC
AGTCTTGTTTTCTTTGCTGAGTGGGGAGATCGCTCTATGCTTGCTACAATTGCTTTGGGT
GCTGCTCAGTCTCCTTTGGGCGTTGCTAGTGGAGCCATTGCTGGACACTTGATTGCAACA
GCCTTTGCTATTCTTGGAGGAGCATTCCTGGCCAACTACTTGTCCGAGAAGCTGGTTGGC
TTGTTAGGAGGAGTATTATTTTTGCTCTTTGCTGCTGCAACGCTTTTTGGTGTATTCTAA

Peptide Sequence

PEP ID

Zm00001d004400_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:109230530:109236830:-1 gene:Zm00001d004400 transcript:Zm00001d004400_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDT1-like protein 2 chloroplastic
Sequence

MLAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRI
FQSVPAQFQTTLPIGEYSAVALLAFFGFKSIKDALALPDNANGNLQGNSESGELAEAEEL
VKEKVSKNLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPLGVASGAIAGHLIAT
AFAILGGAFLANYLSEKLVGLLGGVLFLLFAAATLFGVF

Transcript Sequence

Transcript ID

Zm00001d004400_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:109230530:109236830:-1 gene:Zm00001d004400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDT1-like protein 2 chloroplastic
Sequence

GGAAGTTATGGAGGAGATGAAGCAAATGGCCATGGAGAACATTTGGATACCTCTGCTACC
GGAGACCCCAACAAATTGATCTCGTTACCTGCAACCCGTTGGTGTCGTGCTATTTCTGTG
TGCCCTGGCAACTAGTTTTTTCGTTTTCTTTAAAGGACAATCATCTGCAGTTGTAGCTAT
GCTGGCAAAATCAGGTTTCACGGCGGCATTTACACTGATTTTTGTATCTGAGATTGGAGA
TAAGACGTTTTTCATTGCTGCACTACTCGCGATGCAGTATCAAAGAGCACTGGTTTTACT
TGGGTCAATGGCTGCTCTCTCCCTGATGACTATTGTGAGTGTTATAATTGGACGGATTTT
CCAGTCTGTGCCAGCACAGTTCCAAACAACGCTACCCATAGGAGAGTATTCTGCAGTTGC
TCTGCTGGCATTCTTTGGTTTCAAGTCAATAAAAGATGCATTAGCACTTCCTGATAATGC
CAACGGGAACCTTCAAGGGAATTCAGAAAGTGGAGAACTGGCTGAGGCCGAGGAGCTTGT
CAAGGAAAAGGTCTCTAAAAATCTCACCAGCCCTCTTGAAGTCCTTTGGAAGTCCTTCAG
TCTTGTTTTCTTTGCTGAGTGGGGAGATCGCTCTATGCTTGCTACAATTGCTTTGGGTGC
TGCTCAGTCTCCTTTGGGCGTTGCTAGTGGAGCCATTGCTGGACACTTGATTGCAACAGC
CTTTGCTATTCTTGGAGGAGCATTCCTGGCCAACTACTTGTCCGAGAAGCTGGTTGGCTT
GTTAGGAGGAGTATTATTTTTGCTCTTTGCTGCTGCAACGCTTTTTGGTGTATTCTAATC
TATCTGAAGAATTTGCTGTTAGGGGAAAGACCTCGCAGTTCCAGTTTGGTCTTAGATTTT
GAAGATGAGGGGCAAACCCAAGTAGGCTTGGCACATGCTGTATGTAGATAGACGTTATCC
TTATCAGAGATGATTTCGATGTGCCCAAAATTCTACCAGACAGACTGGAAACTGCATCAC
ATGGACAGCTTACAGAAGTTACCATTCAAATAATTTGATTAGATTTGTT