Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004371_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:106774658:106775819:-1 gene:Zm00001d004371 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGGCATCCCCAAGGCTTTGCTTCTTGCCATCCTCGGCTGCGGCGTCTGCTTGTGCAGC GCTGCTGTCCTTGCAGCTCGCGAGCTGGGGGGCGACGACGAGCTGGCCATGGTGGCGAGG CACGAGCAGTGGATGGTCCAGCACGGGCGCGTCTACAAGGATGAAACCGACAAGGCACAC CGGTTCCTAGTGTTCAAGGCCAACGTCAAGTTCATCGAGTCGTTCAACGCTGCCGCCGCC GCCGGCAACCGCAAGTTCTGGCTGGGTGTGAACCAGTTCGCCGACCTCACCAACGACGAA TTCAGAGCAACCAAGACCAACAAGGGATTTAACCCAAATGTGGTGAAGGTTCCCACGGGA TTCCGGTACCAGAATCTTAGCATCGATGCACTTCCGCAAACCGTGGACTGGAGGACCAAG GGTGCTGTCACGCCCATCAAGGACCAAGGCCAGTGCGGCTGCTGTTGGGCGTTCTCAGCG GTGGCTGCCACGGAGGGCATCGTCAAGATAAGCACCGGCAAGCTAACCTCACTCTCGGAG CAAGAACTAGTGGACTGTGACGTCCACGGTGAGGACCAGGGCTGCAACGGCGGCGAGATG GACGACGCCTTCAAGTTCATCATCAAGAACGGTGGCCTTACCACCGAGTCGAACTACCCT TACACCGCGCAAGACGGCCAGTGCAAGTCCGGATCCAACGGCGCCGCAACCATCAAGGGG TACGAGGATGTGCCTGCCAACGACGAGGCCGCCCTCATGAAGGCGGTAGCTAGCCAGCCA GTCTCTGTGGCGGTGGACGGCGGCGACATGACATTTCAGTTCTACTCTGGAGGCGTGATG ACGGGATCTTGCGGCACTGACCTCGACCATGGTATTGCAGCTATTGGTTATGGAAAGACC AGTGATGGCACCAAGTACTGGCTGATGAAGAACTCGTGGGGCACAACTTGGGGAGAGAAT GGATTTCTGAGAATGGAGAAGGATATTGCTGACAAGAAGGGGATGTGTGGCCTTGCCATG CAACCATCCTACCCTACTGCGTAG

Peptide Sequence

PEP ID	Zm00001d004371_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:106774658:106775819:-1 gene:Zm00001d004371 transcript:Zm00001d004371_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MGIPKALLLAILGCGVCLCSAAVLAARELGGDDELAMVARHEQWMVQHGRVYKDETDKAH RFLVFKANVKFIESFNAAAAAGNRKFWLGVNQFADLTNDEFRATKTNKGFNPNVVKVPTG FRYQNLSIDALPQTVDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLTSLSE QELVDCDVHGEDQGCNGGEMDDAFKFIIKNGGLTTESNYPYTAQDGQCKSGSNGAATIKG YEDVPANDEAALMKAVASQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKT SDGTKYWLMKNSWGTTWGENGFLRMEKDIADKKGMCGLAMQPSYPTA

Transcript Sequence

Transcript ID	Zm00001d004371_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:106774658:106775819:-1 gene:Zm00001d004371 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGGCATCCCCAAGGCTTTGCTTCTTGCCATCCTCGGCTGCGGCGTCTGCTTGTGCAGC GCTGCTGTCCTTGCAGCTCGCGAGCTGGGGGGCGACGACGAGCTGGCCATGGTGGCGAGG CACGAGCAGTGGATGGTCCAGCACGGGCGCGTCTACAAGGATGAAACCGACAAGGCACAC CGGTTCCTAGTGTTCAAGGCCAACGTCAAGTTCATCGAGTCGTTCAACGCTGCCGCCGCC GCCGGCAACCGCAAGTTCTGGCTGGGTGTGAACCAGTTCGCCGACCTCACCAACGACGAA TTCAGAGCAACCAAGACCAACAAGGGATTTAACCCAAATGTGGTGAAGGTTCCCACGGGA TTCCGGTACCAGAATCTTAGCATCGATGCACTTCCGCAAACCGTGGACTGGAGGACCAAG GGTGCTGTCACGCCCATCAAGGACCAAGGCCAGTGCGGCTGCTGTTGGGCGTTCTCAGCG GTGGCTGCCACGGAGGGCATCGTCAAGATAAGCACCGGCAAGCTAACCTCACTCTCGGAG CAAGAACTAGTGGACTGTGACGTCCACGGTGAGGACCAGGGCTGCAACGGCGGCGAGATG GACGACGCCTTCAAGTTCATCATCAAGAACGGTGGCCTTACCACCGAGTCGAACTACCCT TACACCGCGCAAGACGGCCAGTGCAAGTCCGGATCCAACGGCGCCGCAACCATCAAGGGG TACGAGGATGTGCCTGCCAACGACGAGGCCGCCCTCATGAAGGCGGTAGCTAGCCAGCCA GTCTCTGTGGCGGTGGACGGCGGCGACATGACATTTCAGTTCTACTCTGGAGGCGTGATG ACGGGATCTTGCGGCACTGACCTCGACCATGGTATTGCAGCTATTGGTTATGGAAAGACC AGTGATGGCACCAAGTACTGGCTGATGAAGAACTCGTGGGGCACAACTTGGGGAGAGAAT GGATTTCTGAGAATGGAGAAGGATATTGCTGACAAGAAGGGGATGTGTGGCCTTGCCATG CAACCATCCTACCCTACTGCGTAG