Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004364_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:106617018:106618030:1 gene:Zm00001d004364 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence

ATGGCCGAGAGGCATGAGAGGTGGATGGCGGAGTATGACCGCGTCTACAAGGACGCAGCC
GAGAAGGCACGGCGCTTCGAGGTGTTCAAGGATAACTTCGCATTCGTCGAGTCGTTCAAC
GCCGATAAGAAGAACAAGTTCTGGCTTGGCGTGAACCAGTTCGCCGACCTGACTACCGAA
GAGTTCAAAGCAAACAAAGGCTTCAAACCGATCTCAGCAGAAGAGGTCCCCACGACTGGA
TTCAAGTACGAGAACTTAAGCGTTAGCGCGCTTCCCACGGCCGTCGATTGGAGGACCAAG
GGAGCTGTCACACCCATCAAGAACCAAGGCCAGTGTGGTTGCTGCTGGGCGTTCTCGGCC
ATAGCTGCCATGGAGGGCATCGTGAAGCTGAGCACCGGCAACCTCGTCTCACTCTCAGAG
CAAGAACCGGTGGACTGTGACACCCACAACATGGACGAGGGCTGCGAGGGGGGCTGGATG
GACAATGCCTTCGAGTTCGTCATCAAGAACGGAGGCCTGGCCACCGAGTCCAGCTACCCG
TACAAGGTCGTGGACGGCAAGTGCAAGGGCGGGTCAAAGAGCGCCGCGACGATCAAAGGC
CATGAGGACGTGCCGCCCAACAACGAGGCCGCGCTCATGAAGGTCGTGGCCAGTCAGCCT
GTGTCGGTCGCCGTCGATGCAAGCGACAGGACTTTCATGCTTTACTCCGGCGGTGTGATG
ACCGGCTCCTGCGGCACTCAACTAGACCATGGCATCGCTGCGATCGGCTATGGCGTGGAG
AGTGACGACACAAAGTATTGGATTCTGAAGAACTCGTGGGGCACCACCTGGGGAGAGAAG
GGGTTCCTACGGATGGAGAAGGACATTTCTGACAAGCGAGGGATGTGCGACCTTGCCATG
AAACCTTCCTACCCCACCGAATAG

Peptide Sequence

PEP ID

Zm00001d004364_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:106617018:106618030:1 gene:Zm00001d004364 transcript:Zm00001d004364_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence

MAERHERWMAEYDRVYKDAAEKARRFEVFKDNFAFVESFNADKKNKFWLGVNQFADLTTE
EFKANKGFKPISAEEVPTTGFKYENLSVSALPTAVDWRTKGAVTPIKNQGQCGCCWAFSA
IAAMEGIVKLSTGNLVSLSEQEPVDCDTHNMDEGCEGGWMDNAFEFVIKNGGLATESSYP
YKVVDGKCKGGSKSAATIKGHEDVPPNNEAALMKVVASQPVSVAVDASDRTFMLYSGGVM
TGSCGTQLDHGIAAIGYGVESDDTKYWILKNSWGTTWGEKGFLRMEKDISDKRGMCDLAM
KPSYPTE

Transcript Sequence

Transcript ID

Zm00001d004364_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:106617018:106618030:1 gene:Zm00001d004364 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence

ATGGCCGAGAGGCATGAGAGGTGGATGGCGGAGTATGACCGCGTCTACAAGGACGCAGCC
GAGAAGGCACGGCGCTTCGAGGTGTTCAAGGATAACTTCGCATTCGTCGAGTCGTTCAAC
GCCGATAAGAAGAACAAGTTCTGGCTTGGCGTGAACCAGTTCGCCGACCTGACTACCGAA
GAGTTCAAAGCAAACAAAGGCTTCAAACCGATCTCAGCAGAAGAGGTCCCCACGACTGGA
TTCAAGTACGAGAACTTAAGCGTTAGCGCGCTTCCCACGGCCGTCGATTGGAGGACCAAG
GGAGCTGTCACACCCATCAAGAACCAAGGCCAGTGTGGTTGCTGCTGGGCGTTCTCGGCC
ATAGCTGCCATGGAGGGCATCGTGAAGCTGAGCACCGGCAACCTCGTCTCACTCTCAGAG
CAAGAACCGGTGGACTGTGACACCCACAACATGGACGAGGGCTGCGAGGGGGGCTGGATG
GACAATGCCTTCGAGTTCGTCATCAAGAACGGAGGCCTGGCCACCGAGTCCAGCTACCCG
TACAAGGTCGTGGACGGCAAGTGCAAGGGCGGGTCAAAGAGCGCCGCGACGATCAAAGGC
CATGAGGACGTGCCGCCCAACAACGAGGCCGCGCTCATGAAGGTCGTGGCCAGTCAGCCT
GTGTCGGTCGCCGTCGATGCAAGCGACAGGACTTTCATGCTTTACTCCGGCGGTGTGATG
ACCGGCTCCTGCGGCACTCAACTAGACCATGGCATCGCTGCGATCGGCTATGGCGTGGAG
AGTGACGACACAAAGTATTGGATTCTGAAGAACTCGTGGGGCACCACCTGGGGAGAGAAG
GGGTTCCTACGGATGGAGAAGGACATTTCTGACAAGCGAGGGATGTGCGACCTTGCCATG
AAACCTTCCTACCCCACCGAATAG