Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004339_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:104567292:104574379:-1 gene:Zm00001d004339 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 3
Sequence

ATGGCTCCGTTCGGCGACGGCGGCTGGGGTGGCGACGGAGGGGAGGCGCTGCTGGGGCGG
GACCCGCTGCGCAGTGGCAGCGCGCCGCCGACGATGGAGGCCGGCGCGGAGGCAGCGGTG
GCGGCGGAGAGGGTGTTTGGCAGCGTTGGTGGCGGCGCCTCGTTCTTCTCCGGTATCGAC
GGGCGCGGGTTGGGCGCGAGGATGGACGAGGTCACCATGCGCCACGGTGCTGCCGGAGTT
CAGGAACATTTTGGCAATTCTGCATCTTTATCTGTTAGACCACATGGCCAACAGTTTAAT
GGTACAGGAGACTTGGATGAACAGCAGTTTGGACTGAGCAGAGTTCATAGTGGTGGTGTT
ATGGCAAACTACTCTGCATCTGACATGGGTCCCCTTTGGACAGATATGAATCCAGACAAT
GTTGACTATTGCAGAAATATCCAGAATCGCTCCATGTCAAACATTGGAAAGATGAATGCT
TATGGCAATAGGGATCTTAGTGCTTCCTACATGTTTGATTCTAATCTTTTAGATGCTTTA
TCTGGGCTGAGGCTGTCTAATAGTCTAGTAATGGACCAATGGAATCATGGGGAAGGGCAA
CTAGACGAAATACTCGAGTGTCAAAGAGATTTCTCAAAAATTGGTGATGAAAATCGATCA
CCTTTGGTTGGTAATGTTTTTCGTGCATCTAGGTCGGATGTGCATCCACTGCCAATATAT
GGACATGGCATTTCACAGAGGCAGACCAGTGCATTAGATGGTTCCAATGTTTCAAGGTTC
AGTCGCCATCACATAAAGGGTGTTGATCACTTATCTTTGGCTGCTGAACGGGTAGCTGCA
ATGCAATCAGGCAACCTGCGTAGAGGAACCAATCTTTCTCGCAATGCGTATATGACTAAT
ATGGTCAACCCCATGAGCAACAGATACTACAGTAATACAGACTTGGATTTGGTTAGTAGT
CGAAGGGCGTTCCTTGATGATCTACTTGCACAACAGTATCTGCAGGAGGATAATCTGTCA
TATGATGATAGTAGGATCTATCATGGCGAGCCTCGTTTTTCCTCTTCAAGAATGCAAAGA
CCTGGATCTCATTTTTATCCAAATTCGAGGAACATTCTATCCCATGGTGATCGGCAATCA
CGGTTCTTCTCCCTCAATAGAAAGGCAATGGGTAGAAATATTGGATCACAGGTCTATCAT
GACAATGCATTAGCAAACTACCTGGATGTGCCTTCTTTGGATAATGCAGATAGAAATGGA
GCTGATTCAGTGGAGTTAATTGATGTAGTGGGCCACGTTAAGGAAGTTAGTATGGATCAA
TATGGAAGCCGGTTTATTCAACAAAAACTTGAAATTGCATCACCGGATGACCGGGAAAAA
ATATTTCCAGAGATATTATCCAACGTCATTGTTCTAACAACTGATGTTTTTGGCAATTAT
GTTATCCAGAAGTTTTTCGAGTTCGCCACAGAAAGTCAGTTAATCCAATTGGCAGATCAA
CTCAAAGGTCGAATTTTGGAACTTAGCCTCCAGATGTATGGTTGCAGGGTAGTTCAGAAG
GTTTTGGAGGTAGTTGGTATGGATCAAAAGGTCGACATTGTTCATGAGCTCAAGAATTAT
ATTCTGAAATGTATTGGCGATCAAAATGGTAACCATGTGATTCAGAAATGCATTGAGTGT
GTTCCTGAAGACCGCATTCCATTTGTTATTGATCCTATACTTTCACAAATCCTTGTTCTG
TGTACCCATCAATATGGCTGCAGAGTTATTCAGAGAGTTCTGGAGCATTGCCATGATCCT
GTGACTCAAAGTGCTATTATGAATGAAATTATGCAGCAGACCTTCCATTTGACAGATGAT
AAGTTTGGGAACTATGTTGTTCAACATGTGTTGGAACACGGAAAGCCAGAAGAGCGTTCC
GTCATCATTCAAAAGCTGTCTGGGCAAGTGGTCACCTTGAGCAAGCAAAAGTTTGCTTCT
AATGTCATTGAGAAATGTTTGGAATTTGGAACTCCTGAAGAACGTGATAGCCTTATTGGG
GAAATCATTTCTTCTGGTCAAACATTTCAGGAGCTGATGAAGGATCAGTTTGGTAACTAT
GTTGTACAGAAAGTCCTTGAGACATGTGACGACAAATACCTAGAGATGATCCTCTCGAGC
ATCAAATTGCACTTGAATGAACTGAAGAACTACACGTACGGGAAGCACATCGTAGCACGT
GTGGAGAAGCTAATCGTTACAGGAGAGAATCGAGCAAGGATGGCGTCCATGAGTGGCCAG
CATCAGCAGCAGCAACCTAACAACTGTACAGCTGTAGACGAACACTAG

Peptide Sequence

PEP ID

Zm00001d004339_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:104567292:104574379:-1 gene:Zm00001d004339 transcript:Zm00001d004339_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 3
Sequence

MAPFGDGGWGGDGGEALLGRDPLRSGSAPPTMEAGAEAAVAAERVFGSVGGGASFFSGID
GRGLGARMDEVTMRHGAAGVQEHFGNSASLSVRPHGQQFNGTGDLDEQQFGLSRVHSGGV
MANYSASDMGPLWTDMNPDNVDYCRNIQNRSMSNIGKMNAYGNRDLSASYMFDSNLLDAL
SGLRLSNSLVMDQWNHGEGQLDEILECQRDFSKIGDENRSPLVGNVFRASRSDVHPLPIY
GHGISQRQTSALDGSNVSRFSRHHIKGVDHLSLAAERVAAMQSGNLRRGTNLSRNAYMTN
MVNPMSNRYYSNTDLDLVSSRRAFLDDLLAQQYLQEDNLSYDDSRIYHGEPRFSSSRMQR
PGSHFYPNSRNILSHGDRQSRFFSLNRKAMGRNIGSQVYHDNALANYLDVPSLDNADRNG
ADSVELIDVVGHVKEVSMDQYGSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVFGNY
VIQKFFEFATESQLIQLADQLKGRILELSLQMYGCRVVQKVLEVVGMDQKVDIVHELKNY
ILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDP
VTQSAIMNEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFAS
NVIEKCLEFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLETCDDKYLEMILSS
IKLHLNELKNYTYGKHIVARVEKLIVTGENRARMASMSGQHQQQQPNNCTAVDEH

Transcript Sequence

Transcript ID

Zm00001d004339_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:104567292:104574379:-1 gene:Zm00001d004339 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 3
Sequence

GTTGCCCGCGCCACCTTCGGGTGGTTTCGTTCAAACCCAACCTATTTTTTCGCGAACGCG
CGCGTGCGGCGTTACGAGAGGAGGCGGAGAAGATGGCTCCGTTCGGCGACGGCGGCTGGG
GTGGCGACGGAGGGGAGGCGCTGCTGGGGCGGGACCCGCTGCGCAGTGGCAGCGCGCCGC
CGACGATGGAGGCCGGCGCGGAGGCAGCGGTGGCGGCGGAGAGGGTGTTTGGCAGCGTTG
GTGGCGGCGCCTCGTTCTTCTCCGGTATCGACGGGCGCGGGTTGGGCGCGAGGATGGACG
AGGTCACCATGCGCCACGGTGCTGCCGGAGTTCAGGAACATTTTGGCAATTCTGCATCTT
TATCTGTTAGACCACATGGCCAACAGTTTAATGGTACAGGAGACTTGGATGAACAGCAGT
TTGGACTGAGCAGAGTTCATAGTGGTGGTGTTATGGCAAACTACTCTGCATCTGACATGG
GTCCCCTTTGGACAGATATGAATCCAGACAATGTTGACTATTGCAGAAATATCCAGAATC
GCTCCATGTCAAACATTGGAAAGATGAATGCTTATGGCAATAGGGATCTTAGTGCTTCCT
ACATGTTTGATTCTAATCTTTTAGATGCTTTATCTGGGCTGAGGCTGTCTAATAGTCTAG
TAATGGACCAATGGAATCATGGGGAAGGGCAACTAGACGAAATACTCGAGTGTCAAAGAG
ATTTCTCAAAAATTGGTGATGAAAATCGATCACCTTTGGTTGGTAATGTTTTTCGTGCAT
CTAGGTCGGATGTGCATCCACTGCCAATATATGGACATGGCATTTCACAGAGGCAGACCA
GTGCATTAGATGGTTCCAATGTTTCAAGGTTCAGTCGCCATCACATAAAGGGTGTTGATC
ACTTATCTTTGGCTGCTGAACGGGTAGCTGCAATGCAATCAGGCAACCTGCGTAGAGGAA
CCAATCTTTCTCGCAATGCGTATATGACTAATATGGTCAACCCCATGAGCAACAGATACT
ACAGTAATACAGACTTGGATTTGGTTAGTAGTCGAAGGGCGTTCCTTGATGATCTACTTG
CACAACAGTATCTGCAGGAGGATAATCTGTCATATGATGATAGTAGGATCTATCATGGCG
AGCCTCGTTTTTCCTCTTCAAGAATGCAAAGACCTGGATCTCATTTTTATCCAAATTCGA
GGAACATTCTATCCCATGGTGATCGGCAATCACGGTTCTTCTCCCTCAATAGAAAGGCAA
TGGGTAGAAATATTGGATCACAGGTCTATCATGACAATGCATTAGCAAACTACCTGGATG
TGCCTTCTTTGGATAATGCAGATAGAAATGGAGCTGATTCAGTGGAGTTAATTGATGTAG
TGGGCCACGTTAAGGAAGTTAGTATGGATCAATATGGAAGCCGGTTTATTCAACAAAAAC
TTGAAATTGCATCACCGGATGACCGGGAAAAAATATTTCCAGAGATATTATCCAACGTCA
TTGTTCTAACAACTGATGTTTTTGGCAATTATGTTATCCAGAAGTTTTTCGAGTTCGCCA
CAGAAAGTCAGTTAATCCAATTGGCAGATCAACTCAAAGGTCGAATTTTGGAACTTAGCC
TCCAGATGTATGGTTGCAGGGTAGTTCAGAAGGTTTTGGAGGTAGTTGGTATGGATCAAA
AGGTCGACATTGTTCATGAGCTCAAGAATTATATTCTGAAATGTATTGGCGATCAAAATG
GTAACCATGTGATTCAGAAATGCATTGAGTGTGTTCCTGAAGACCGCATTCCATTTGTTA
TTGATCCTATACTTTCACAAATCCTTGTTCTGTGTACCCATCAATATGGCTGCAGAGTTA
TTCAGAGAGTTCTGGAGCATTGCCATGATCCTGTGACTCAAAGTGCTATTATGAATGAAA
TTATGCAGCAGACCTTCCATTTGACAGATGATAAGTTTGGGAACTATGTTGTTCAACATG
TGTTGGAACACGGAAAGCCAGAAGAGCGTTCCGTCATCATTCAAAAGCTGTCTGGGCAAG
TGGTCACCTTGAGCAAGCAAAAGTTTGCTTCTAATGTCATTGAGAAATGTTTGGAATTTG
GAACTCCTGAAGAACGTGATAGCCTTATTGGGGAAATCATTTCTTCTGGTCAAACATTTC
AGGAGCTGATGAAGGATCAGTTTGGTAACTATGTTGTACAGAAAGTCCTTGAGACATGTG
ACGACAAATACCTAGAGATGATCCTCTCGAGCATCAAATTGCACTTGAATGAACTGAAGA
ACTACACGTACGGGAAGCACATCGTAGCACGTGTGGAGAAGCTAATCGTTACAGGAGAGA
ATCGAGCAAGGATGGCGTCCATGAGTGGCCAGCATCAGCAGCAGCAACCTAACAACTGTA
CAGCTGTAGACGAACACTAGTCCTGTGTATGCGTTGGCGTCAAATACGGACTGCACACTA
ATCCCTTGTTAGGCATTGGCGTCAGATACGACGAGCAGGTGGTATAAGTGACTCCGGAGG
AATCTGGTTTTTAATACATGGTTTATTTAATAGGGTACTTGCAGATAACCAGGGATTTAT
GTTACCTGTATCTAACCAGGCGTGGTGTTTTTCGGGAACTCAGGTTGTTAGATGAGAGCA
GCTGTAAATCCTTCTGGCCATGTACAAGTTTATTACAGTGGATAATAGATGTACATTGTG
CTGGAGCATTAGCTTTTGGTAGTAGGTGAGATCGGTGCTGTGTAATATGTTTCTGTTCCA
GTGCTGTTGGTTCAAATCGTATGCTCGTTTTTTTCT