Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004260_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:97679315:97692204:-1 gene:Zm00001d004260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-related protein 9
Sequence

ATGGACTACCTCAGGACGGTGGTTCCGTCACAACTCTTGGCAGAGCGCGGCTCCAATCTT
GTCGTCATCAACCCAGGATCGGGAAATGTGCGAATGGGGTTTGCTAGTCAGGATGTGCCA
TTCAATATACCACATTGCATTGCCCGACACATCAATCCACAAGAGGGCGAAGAACCAAGA
TTCTCTGTGCGCGATCAGATGCTCAACTGCCATGCTACTTCATCGCAGAATGCAGAGCGG
GAGAGTGCATATGATATTATTGCAGCACTGATGAAAATCCCATTTTTGGACGATGAAGAA
ATGCCTTCACCGAACCAACCCCTTCCTCCAAAGATGGGACGTGTTGATGGCTTCTCTTCG
CAGCAAAACAGAGACGATAATAAATTCACTTGGACAGATGTGTCAGAGAGAATTATTAAG
CCATCCACACCATTCGATAGGTCAGTATACAAGGATGCTGAGGAAGATACTCTGCCAAGC
ACATCTGATGATGATAATGGACAGGACTTTAAAGAGAATAAGTATAAAGAAATGATATTT
GGAGAAGATGCTCTGAAAATCCCTCCTTCAGAGTCATACTGTCTGAGTCGCCCAATTAGG
AGAGGCCATTTTAATGTGTCCCATAATTATTCAGTGCATCAGGTTTTAGAAGATTTACGC
ACTATTTGGAACTGGATACTGACAGAAAAGTTGCATATCAACCCAAGAGACAGAGGTCTA
TATTCTGCAATTCTTGTTCTTGGGGAGACATTTGACAACCGAGGTATTTTTCTCTTCATA
CAACAGAATTTTAGCGTGCAAGAAATAAAAGAGATGCTGTCTATTGTCCTTCATGATTTG
GGGTTCAGCACTGCAGTTGTACATCAGGAAGCTCTATCTGCAGCGTTTGGAAATGGTTTA
TCTACAACTTGTGTTGTCAACATTGGTGCTCAAGTTACACAAGTAGTTTGTGTTGAGGTA
ATAACCCTTGTTTTTTTTTAA

Peptide Sequence

PEP ID

Zm00001d004260_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:97679315:97692204:-1 gene:Zm00001d004260 transcript:Zm00001d004260_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-related protein 9
Sequence

MDYLRTVVPSQLLAERGSNLVVINPGSGNVRMGFASQDVPFNIPHCIARHINPQEGEEPR
FSVRDQMLNCHATSSQNAERESAYDIIAALMKIPFLDDEEMPSPNQPLPPKMGRVDGFSS
QQNRDDNKFTWTDVSERIIKPSTPFDRSVYKDAEEDTLPSTSDDDNGQDFKENKYKEMIF
GEDALKIPPSESYCLSRPIRRGHFNVSHNYSVHQVLEDLRTIWNWILTEKLHINPRDRGL
YSAILVLGETFDNRGIFLFIQQNFSVQEIKEMLSIVLHDLGFSTAVVHQEALSAAFGNGL
STTCVVNIGAQVTQVVCVEVITLVFF

Transcript Sequence

Transcript ID

Zm00001d004260_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:97679315:97692204:-1 gene:Zm00001d004260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-related protein 9
Sequence

GTATCGGAACCATGAAAACGTTGTGTTGCCAAAGTTATCGTTGTCTTCTCTAGCGACGGC
GAGGCTTGAGCGCTCACGTCCCGGCGTTCCCGTGCCGGTGGCCAAGCCAGCGGCCGACGA
GATGGACTACCTCAGGACGGTGGTTCCGTCACAACTCTTGGCAGAGCGCGGCTCCAATCT
TGTCGTCATCAACCCAGGATCGGGAAATGTGCGAATGGGGTTTGCTAGTCAGGATGTGCC
ATTCAATATACCACATTGCATTGCCCGACACATCAATCCACAAGAGGGCGAAGAACCAAG
ATTCTCTGTGCGCGATCAGATGCTCAACTGCCATGCTACTTCATCGCAGAATGCAGAGCG
GGAGAGTGCATATGATATTATTGCAGCACTGATGAAAATCCCATTTTTGGACGATGAAGA
AATGCCTTCACCGAACCAACCCCTTCCTCCAAAGATGGGACGTGTTGATGGCTTCTCTTC
GCAGCAAAACAGAGACGATAATAAATTCACTTGGACAGATGTGTCAGAGAGAATTATTAA
GCCATCCACACCATTCGATAGGTCAGTATACAAGGATGCTGAGGAAGATACTCTGCCAAG
CACATCTGATGATGATAATGGACAGGACTTTAAAGAGAATAAGTATAAAGAAATGATATT
TGGAGAAGATGCTCTGAAAATCCCTCCTTCAGAGTCATACTGTCTGAGTCGCCCAATTAG
GAGAGGCCATTTTAATGTGTCCCATAATTATTCAGTGCATCAGGTTTTAGAAGATTTACG
CACTATTTGGAACTGGATACTGACAGAAAAGTTGCATATCAACCCAAGAGACAGAGGTCT
ATATTCTGCAATTCTTGTTCTTGGGGAGACATTTGACAACCGAGGTATTTTTCTCTTCAT
ACAACAGAATTTTAGCGTGCAAGAAATAAAAGAGATGCTGTCTATTGTCCTTCATGATTT
GGGGTTCAGCACTGCAGTTGTACATCAGGAAGCTCTATCTGCAGCGTTTGGAAATGGTTT
ATCTACAACTTGTGTTGTCAACATTGGTGCTCAAGTTACACAAGTAGTTTGTGTTGAGGT
AATAACCCTTGTTTTTTTTTAA