Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004140_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:86031488:86044743:-1 gene:Zm00001d004140 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

ATGGTCAGCTGCGACGAGTGCAGCGTGTGGGTGCACACGCGGTGCGCACGCTATGTCCGC
GGCGTTCACACATCCTTCTCGTGCCACAAATGCCGGAGGTCCAAGCGCGTGCCTTCCTCC
GCTGACGAGGCCGAGGTTGCTGAGCTCCTCGCCGAGCTGCCAACCCACCGCCCGCCTCCG
CTGTACCGCCGCTGGGCCGAGGTCCCGCTCCCAGCCCGCGTCCACGTCCACGGGCTTCCT
GGCGGGGGCGACGGCGCTCTTTTCCGCGGCGCCCCGGCCTTTTCCGCCGCCCTGTGGCGC
TGCACCGGCTACGTCCCCAAGAGATTTGGCTTCCGCTACTGCGAGTTCCCCTCCTGGGCC
GACGATAATGATGGGGCTGATGCTCTTTTTGCGCTGGCCAGAGAGAAGCCCAGGGAGATG
ACGGATGATGTTTTGATAAGTACTGAACCGAAGAAGGAGAAGCATTATGTCCGAAGCCTG
AGTTGTCGTGGCAAGAAGATTGACAGCAATCAACAAGCAATGACTCCTCTAACCAAGGCT
AAGAAGAGAGAGCCTGATAGTTGGAAGAATGAGTGTCAGCAGAGTGAGGGCTGTGGGATA
CAAGATTCCATTTGCGATGATGGTCACGCTGAAACTAATATGGTCAGTTCTGATTTGCTA
ACTGCTAAAACCAAGAAGAAGATGGAGGAATCCTTGGAGCCAAGTGGGGAGAATAATAAC
TGTGAGCAAGTTGAGATTTCGAGTAAGGATGGCAAAAAGGTGCCCATGAAGTTGGAGGTC
TCATCTGGAGTTCAAACTACATCATCCATTGTGGAACAAGAAGTGCACTCAGGGTTTGTT
GGGGTAGAGGTTACAATGTATAAGCAACAGCCAGAAGAGGATCACATTGTGTGCTCAAGG
CCTGACATAACAAGTTCAGGTCCCATCAAAGTGCAAGACATACAGGGCCTTCCAAAGCAA
CCAAATCAAGCTTCAAATCTGCAGGTTGTTGCTGGTGTACCAGATTTACTTATTGGTCAG
CCAAAACCACAGACTATTAAAACTGAGCCTAGTTCTCAGGAAAACAAGGCAGCTCACTGT
GTCGATTTAGTGAGTGATGACCATGAAAGCAATAAGCAAGGCCTAGGGGATGCTGCAGTT
CTTTCAATCGTCCAAAAAGATTCATCCAATTTAAAATATGGTTCAGTATCCCATGAACAT
CTGAAATCGGAAGCACAAAATCCGAGGCACACAGTTGCTGAGAATCCTAACTCAACTTTG
GGTTCTGCAAAAGTTTGTACATCGTTTTCTGGTTCTGTCTCTACACCACCTGAGTTATCA
CACTCTCTGGCATCTAAAGAACCATCATCAGGGAATAGTGATTGTTCAAAGAAAGAGGAG
TTGCTCTCACCAACTGTCAGCAAACATGATCCCGTGAAATTTTCTGAAGATAGTTCCCAG
GAAGTGACAAGATACTCTGAGAAAGTTCAACTAAAAGACTCACAACCTTCTGCACCAAAA
TCATCTCAAGCTAGTAGAATACATCTGTCTACAGTCAAACATAGATTACCGGTGTCAAAG
GAGCAATCACAGAAGATAGCCCTCACTGGAGGCACCTCAGCAAGATCATTCCATGGAGAG
GTGCCATCACTTCAGTCTCGTAATAAGGCAGCAGCTTGTAGTTCTTCCCAGAAAAAGGAC
AAGATCTACCAGCGCATCATTAATGTCACGCAAGATAGTTCCAATAATTCAGCACCAACC
GAGCTGCGTGCATCTGATTCGGCTGCCCCATTGAGTGATGAGCAGCTTGCATTATTGTTG
CATCAACAATTGAACAGCTCCCCCAGAGTACCGAGGGTGCCACGTTGCCATCAAGCAGCT
GGTGCACAGATGCTTCATTCAACTGGATCATCTGTTTTTTCTAAGCGGTATTCATCACAT
GGAGGAAGGGATCATGCAGCGGTTATAAAAAAGAGAAACAGAGAAGATTCATTAAAAGAT
AGCGAGGACACTAAGAGGACAGAAAAAAGGCATAGAGTTTCTAGCACGGAGCATGCTCCT
GTGAAAAACTCGTGCAGATCAGCTGAAAATATAGCATCAGAACAGAAAATTCGTGGCATA
TGTCCAACTGGAGCCAATGCTGGTTTATCAAAGGATGATTTGATGGATACTATTGTTTCA
CACAATTTACCTGGATTGATTGATGAAATTGTCAGTAAAGACAGGAATATAACATATGTG
GAACTCTGTGATGCTATCCATCAGCATTTTAGGGACTCAAGGAAATCGAATGGGGGAGAT
TCTTTGTATCGCAGTTATGCGGATGCCATCAAAGGTTGCCTTAGGAAGAGGAGGGAGTGG
GCTCACCTTTTTGACCAAGCTTCAAAAGTAAGTTTATGGGCTTCATCATTGCTTGTCATT
TTATCTGGTTACACTTTCCTGTATGGAGTAGGGATGCAAGCTCCACTTGTTTTGGGTTGT
TGGGTTGACTCAAATCTTGCTAAAATAAACTAA

Peptide Sequence

PEP ID

Zm00001d004140_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:86031488:86044743:-1 gene:Zm00001d004140 transcript:Zm00001d004140_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

MVSCDECSVWVHTRCARYVRGVHTSFSCHKCRRSKRVPSSADEAEVAELLAELPTHRPPP
LYRRWAEVPLPARVHVHGLPGGGDGALFRGAPAFSAALWRCTGYVPKRFGFRYCEFPSWA
DDNDGADALFALAREKPREMTDDVLISTEPKKEKHYVRSLSCRGKKIDSNQQAMTPLTKA
KKREPDSWKNECQQSEGCGIQDSICDDGHAETNMVSSDLLTAKTKKKMEESLEPSGENNN
CEQVEISSKDGKKVPMKLEVSSGVQTTSSIVEQEVHSGFVGVEVTMYKQQPEEDHIVCSR
PDITSSGPIKVQDIQGLPKQPNQASNLQVVAGVPDLLIGQPKPQTIKTEPSSQENKAAHC
VDLVSDDHESNKQGLGDAAVLSIVQKDSSNLKYGSVSHEHLKSEAQNPRHTVAENPNSTL
GSAKVCTSFSGSVSTPPELSHSLASKEPSSGNSDCSKKEELLSPTVSKHDPVKFSEDSSQ
EVTRYSEKVQLKDSQPSAPKSSQASRIHLSTVKHRLPVSKEQSQKIALTGGTSARSFHGE
VPSLQSRNKAAACSSSQKKDKIYQRIINVTQDSSNNSAPTELRASDSAAPLSDEQLALLL
HQQLNSSPRVPRVPRCHQAAGAQMLHSTGSSVFSKRYSSHGGRDHAAVIKKRNREDSLKD
SEDTKRTEKRHRVSSTEHAPVKNSCRSAENIASEQKIRGICPTGANAGLSKDDLMDTIVS
HNLPGLIDEIVSKDRNITYVELCDAIHQHFRDSRKSNGGDSLYRSYADAIKGCLRKRREW
AHLFDQASKVSLWASSLLVILSGYTFLYGVGMQAPLVLGCWVDSNLAKIN

Transcript Sequence

Transcript ID

Zm00001d004140_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:86031488:86044743:-1 gene:Zm00001d004140 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

GTCTTCAACATTCCGCCCAGTTTATTCCGCATCGATCCGGAGATTAGGGTTTCCGCTCGC
CGCCGATGAAAGGCGGCCGCCTGCACCGACCGGAGCCGCCGCAGACCCACCTCGCCATGG
CGGCGGCGGCCGCGGCGCCTCCCATCCCCGCCCCTAACCCCACCGACGGTGGACTGTTCC
TGCGGCGTCACGTTCGACGACGGCGAGGAGATGGTCAGCTGCGACGAGTGCAGCGTGTGG
GTGCACACGCGGTGCGCACGCTATGTCCGCGGCGTTCACACATCCTTCTCGTGCCACAAA
TGCCGGAGGTCCAAGCGCGTGCCTTCCTCCGCTGACGAGGCCGAGGTTGCTGAGCTCCTC
GCCGAGCTGCCAACCCACCGCCCGCCTCCGCTGTACCGCCGCTGGGCCGAGGTCCCGCTC
CCAGCCCGCGTCCACGTCCACGGGCTTCCTGGCGGGGGCGACGGCGCTCTTTTCCGCGGC
GCCCCGGCCTTTTCCGCCGCCCTGTGGCGCTGCACCGGCTACGTCCCCAAGAGATTTGGC
TTCCGCTACTGCGAGTTCCCCTCCTGGGCCGACGATAATGATGGGGCTGATGCTCTTTTT
GCGCTGGCCAGAGAGAAGCCCAGGGAGATGACGGATGATGTTTTGATAAGTACTGAACCG
AAGAAGGAGAAGCATTATGTCCGAAGCCTGAGTTGTCGTGGCAAGAAGATTGACAGCAAT
CAACAAGCAATGACTCCTCTAACCAAGGCTAAGAAGAGAGAGCCTGATAGTTGGAAGAAT
GAGTGTCAGCAGAGTGAGGGCTGTGGGATACAAGATTCCATTTGCGATGATGGTCACGCT
GAAACTAATATGGTCAGTTCTGATTTGCTAACTGCTAAAACCAAGAAGAAGATGGAGGAA
TCCTTGGAGCCAAGTGGGGAGAATAATAACTGTGAGCAAGTTGAGATTTCGAGTAAGGAT
GGCAAAAAGGTGCCCATGAAGTTGGAGGTCTCATCTGGAGTTCAAACTACATCATCCATT
GTGGAACAAGAAGTGCACTCAGGGTTTGTTGGGGTAGAGGTTACAATGTATAAGCAACAG
CCAGAAGAGGATCACATTGTGTGCTCAAGGCCTGACATAACAAGTTCAGGTCCCATCAAA
GTGCAAGACATACAGGGCCTTCCAAAGCAACCAAATCAAGCTTCAAATCTGCAGGTTGTT
GCTGGTGTACCAGATTTACTTATTGGTCAGCCAAAACCACAGACTATTAAAACTGAGCCT
AGTTCTCAGGAAAACAAGGCAGCTCACTGTGTCGATTTAGTGAGTGATGACCATGAAAGC
AATAAGCAAGGCCTAGGGGATGCTGCAGTTCTTTCAATCGTCCAAAAAGATTCATCCAAT
TTAAAATATGGTTCAGTATCCCATGAACATCTGAAATCGGAAGCACAAAATCCGAGGCAC
ACAGTTGCTGAGAATCCTAACTCAACTTTGGGTTCTGCAAAAGTTTGTACATCGTTTTCT
GGTTCTGTCTCTACACCACCTGAGTTATCACACTCTCTGGCATCTAAAGAACCATCATCA
GGGAATAGTGATTGTTCAAAGAAAGAGGAGTTGCTCTCACCAACTGTCAGCAAACATGAT
CCCGTGAAATTTTCTGAAGATAGTTCCCAGGAAGTGACAAGATACTCTGAGAAAGTTCAA
CTAAAAGACTCACAACCTTCTGCACCAAAATCATCTCAAGCTAGTAGAATACATCTGTCT
ACAGTCAAACATAGATTACCGGTGTCAAAGGAGCAATCACAGAAGATAGCCCTCACTGGA
GGCACCTCAGCAAGATCATTCCATGGAGAGGTGCCATCACTTCAGTCTCGTAATAAGGCA
GCAGCTTGTAGTTCTTCCCAGAAAAAGGACAAGATCTACCAGCGCATCATTAATGTCACG
CAAGATAGTTCCAATAATTCAGCACCAACCGAGCTGCGTGCATCTGATTCGGCTGCCCCA
TTGAGTGATGAGCAGCTTGCATTATTGTTGCATCAACAATTGAACAGCTCCCCCAGAGTA
CCGAGGGTGCCACGTTGCCATCAAGCAGCTGGTGCACAGATGCTTCATTCAACTGGATCA
TCTGTTTTTTCTAAGCGGTATTCATCACATGGAGGAAGGGATCATGCAGCGGTTATAAAA
AAGAGAAACAGAGAAGATTCATTAAAAGATAGCGAGGACACTAAGAGGACAGAAAAAAGG
CATAGAGTTTCTAGCACGGAGCATGCTCCTGTGAAAAACTCGTGCAGATCAGCTGAAAAT
ATAGCATCAGAACAGAAAATTCGTGGCATATGTCCAACTGGAGCCAATGCTGGTTTATCA
AAGGATGATTTGATGGATACTATTGTTTCACACAATTTACCTGGATTGATTGATGAAATT
GTCAGTAAAGACAGGAATATAACATATGTGGAACTCTGTGATGCTATCCATCAGCATTTT
AGGGACTCAAGGAAATCGAATGGGGGAGATTCTTTGTATCGCAGTTATGCGGATGCCATC
AAAGGTTGCCTTAGGAAGAGGAGGGAGTGGGCTCACCTTTTTGACCAAGCTTCAAAAGTA
AGTTTATGGGCTTCATCATTGCTTGTCATTTTATCTGGTTACACTTTCCTGTATGGAGTA
GGGATGCAAGCTCCACTTGTTTTGGGTTGTTGGGTTGACTCAAATCTTGCTAAAATAAAC
TAAAATGGCATGCCACATAATTAATTTAGGGGGAGGAATGAACTAAAATGGCTGGCCATA
AAAAAATGGTGTTGGATGGCTGATTGCCTTGCCAAATACTCTGCCTCATCATCTACTTAC
CCGCTCTGCTACCAGTCTTTTTTTTCCCGAAAAGCACAGGAGAACTACGCCCCATTATAT
TAAGGAGGTAAAAGGTCTAAGAAGACCAGGTACAACAAGACAGACTTCCTTACGGAGGTC
TTAAAACCAG