Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004133_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:85452984:85454824:-1 gene:Zm00001d004133 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0065B15.1 protein; OSJNBb0071D01.5 protein; protein
Sequence

ATGGACTCCGCCACCGTGGCGCTCGCCAGCCCCGCCTCCGACGACCGACGGTTCTGGGAC
CGCCTCCGCACCCGCGTCGACACCATCCTCGAGGACCGCCGTGGCCTCCCGCCAGCCGCC
GCCGCCGGTGCCCCCATGCGCGGGGTGGAATCTGAGCGGGGGAAGCGGCTCCGGGAGGAC
TCCCTGATGCTCGTCCGTGGCCTCGACTCTGTGGCGGAGTCTCTGGCACAGCTCTCCGAC
ACCCTCACCGCCGCGCAGAAGGGAGTGAGTGCTCTCGCGACCTGCTCTTCGCAGGCGAGG
GGATGCGAAGGCGGCGCCTGCCCCTGCCCCGAGGAGGTGAAGGCAGAGGAGGAGGAGCCC
AGGGCGAAGCGGATGTGTGGCGGCTCCACGGAAGATTCTCCACGGAACGGCCTGGACAGC
AATTCTCCGGCCGCTGGAGAGGAAACGGCGGCTGGTCCTGATGGTCTGGGGAAGGGGAAT
GTCCAGGCCTCTGCTGAGATCGCACAGAGCACTAACCTGAAGCGGGCCAGAAGTCTGGCG
GTGTCAATGGCAAGCAGAGCCGCTGCACTCGCTAGGGAGCTCAAGAACATCAAGTCAGAG
CTGCACTTCATGCAGGAGAGGTGCGGTTTGCTAGAGGAGGAGAACAAGAGGCTCAGAGAG
GGGTGTGACAATGGAGTTGCCCCTGAAGAAGATGACTTGGTGAGGCTGCAACTGGAGGCT
CTGCTTGCAGAGAAGTCGCGTCTGGCGCAAGAGAACGCCAACCTGACGAGAGAGAACCAG
GGCCTGATGCAGCTGGTTGAGTATCACCAGTTGGCATCCCAGGATCTGGATGAGTCCTAT
GAGGATGTTATGCAGGGGATACGGCTTGACTTCTCGTCACCGCTGGGGAAGATCAGCGAC
GATGAAGAAGGCGAGCGCGACGATGAAGTTCCGGTCACCCCAGCTGAGGTGCCATGCTCC
CCCGACGAGTAG

Peptide Sequence

PEP ID

Zm00001d004133_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:85452984:85454824:-1 gene:Zm00001d004133 transcript:Zm00001d004133_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0065B15.1 protein; OSJNBb0071D01.5 protein; protein
Sequence

MDSATVALASPASDDRRFWDRLRTRVDTILEDRRGLPPAAAAGAPMRGVESERGKRLRED
SLMLVRGLDSVAESLAQLSDTLTAAQKGVSALATCSSQARGCEGGACPCPEEVKAEEEEP
RAKRMCGGSTEDSPRNGLDSNSPAAGEETAAGPDGLGKGNVQASAEIAQSTNLKRARSLA
VSMASRAAALARELKNIKSELHFMQERCGLLEEENKRLREGCDNGVAPEEDDLVRLQLEA
LLAEKSRLAQENANLTRENQGLMQLVEYHQLASQDLDESYEDVMQGIRLDFSSPLGKISD
DEEGERDDEVPVTPAEVPCSPDE

Transcript Sequence

Transcript ID

Zm00001d004133_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:85452984:85454824:-1 gene:Zm00001d004133 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0065B15.1 protein; OSJNBb0071D01.5 protein; protein
Sequence

ACTTAATTTCGACCGTTGTGAAGCGACAACCCCCGTTTTAAAGGTCTCTTTCCCCGATTC
CATCTCATCCAAGTCCTTTCTCCACCGAACCTCAGGAACTAGCCGTTGCCCGCACCTCTC
CACGTCGCGCTTCCCATGGACTCCGCCACCGTGGCGCTCGCCAGCCCCGCCTCCGACGAC
CGACGGTTCTGGGACCGCCTCCGCACCCGCGTCGACACCATCCTCGAGGACCGCCGTGGC
CTCCCGCCAGCCGCCGCCGCCGGTGCCCCCATGCGCGGGGTGGAATCTGAGCGGGGGAAG
CGGCTCCGGGAGGACTCCCTGATGCTCGTCCGTGGCCTCGACTCTGTGGCGGAGTCTCTG
GCACAGCTCTCCGACACCCTCACCGCCGCGCAGAAGGGAGTGAGTGCTCTCGCGACCTGC
TCTTCGCAGGCGAGGGGATGCGAAGGCGGCGCCTGCCCCTGCCCCGAGGAGGTGAAGGCA
GAGGAGGAGGAGCCCAGGGCGAAGCGGATGTGTGGCGGCTCCACGGAAGATTCTCCACGG
AACGGCCTGGACAGCAATTCTCCGGCCGCTGGAGAGGAAACGGCGGCTGGTCCTGATGGT
CTGGGGAAGGGGAATGTCCAGGCCTCTGCTGAGATCGCACAGAGCACTAACCTGAAGCGG
GCCAGAAGTCTGGCGGTGTCAATGGCAAGCAGAGCCGCTGCACTCGCTAGGGAGCTCAAG
AACATCAAGTCAGAGCTGCACTTCATGCAGGAGAGGTGCGGTTTGCTAGAGGAGGAGAAC
AAGAGGCTCAGAGAGGGGTGTGACAATGGAGTTGCCCCTGAAGAAGATGACTTGGTGAGG
CTGCAACTGGAGGCTCTGCTTGCAGAGAAGTCGCGTCTGGCGCAAGAGAACGCCAACCTG
ACGAGAGAGAACCAGGGCCTGATGCAGCTGGTTGAGTATCACCAGTTGGCATCCCAGGAT
CTGGATGAGTCCTATGAGGATGTTATGCAGGGGATACGGCTTGACTTCTCGTCACCGCTG
GGGAAGATCAGCGACGATGAAGAAGGCGAGCGCGACGATGAAGTTCCGGTCACCCCAGCT
GAGGTGCCATGCTCCCCCGACGAGTAGGCAGGCGAACGGGAGGAATAAGATGGGTTTTCC
ATCGATGGAATTCCTTTGTACCAGGTGCCAACAGTAGGCAGTTTTTTTTCCTATGTGATC
ACTACCGGTGGCCAGTTTTTGATGTTTCTATGATTTATATAAAAACTTCTATGTGTAGCA
ATTTTATATGATGCATCTTGCACACGACAAGTTCGCAGAAACAGATTCTGGTTACAGATA
AAATCTGAGATACCCTTTTGAGTGAAAACAAGACGGGGGAATGGTTGTACAATGAGCCAT
AAAAAATCGGCATCACAAGTATCTCTATTACAGGACGTGTAACCACTAAACAATA