Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004119_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:2:83934108:83945752:-1 gene:Zm00001d004119 gene_biotype:protein_coding transcript_biotype:protein_coding description:DnaJ protein ERDJ2A
Sequence	ATGAAGAAAAAATATATCTTACCTGGTGAACTCTTCTTACGCCTTTTCTCCCACACATAC CCAGAGGCTCATAAATACTTCATTGAATATATATCCAAGGCATATCAAGCATTAACTGAT CCTATATCTCGTGAGAATTATGAGAAATATGGTCACCCTGATGGGCGGCAGGGGCTGCAA ATGGGCATTGCTTTGCCCAAGTTTTTACTAAATATTGATGGTGCATCTGGTGGGATAATG CTTCTTGGAATAGTCGGATTTTGTATATTATTGCCTTTGATGATAGCTGTTATTTATTTG TCAAGATCATCAAAATATACTGGAAACTATGTCATGCATCAAACTTTGTCCACTTACTAC TACTTTATGAAGCCATCTCTTGCTCCAAGCAAAGTTATAGATGTCTTCATCAAGGCTGCA GAATATATGGAGATGCCAGTTCGACGCAGTGATGATGAACCCCTGCAAAAATTGTTTGTA GCTGTTAGAAGCGAGTTAAATCTGGACTTAAAGAACATTAAGACAGAACAAGCAAAGTTC TGGAAGCAGCATCCATCACTAGTAAAGATGGAACTGCTGATTCAGGCGCATCTCACTTGT GAGTCATTCGCTTTGACGCCAGCACTTCTTAAAGATTACAGACACATGCTTGAACTTGCA CCTCGTCTTCTGGAAGAACTCGTTAAGATTGCAGTTTTACCAAGGAATCCCCATGGTTTT GGATGGCTCCGGCCTGCACTCAGTGTTATTGAGCTTTCTCAAAATATTATCCAGGCTGTA CCATTAAGTGCACGAAAAGCTAGTGGTGCTAACTCGGAAGGAATAGCGCCTTTCTTGCAG CTGCCACATTTCACAGAAGCAACCGTGAAAAAGATTGCTCGCAAGAAAATCCGTGCATTC CAAGAACTTTGTGACATGCCTGTGGAAGATCGTGCTGCATTGCTCACACAAGTTGCTGGG CTTTCTGAAGAACAAGCTCGGGATGTAGAGTTTGTACTGGAGATGATTCCTTCTATTGAA GTAGACATGAAATGTGAGACTGAAGGTGAAGAGGGCATTCAAGAGGGTGATGTCGTGACC ATGTATGCTTGGGTCTCGCTACAACGGCGCAATGGACTGACTGCTGCTCTTCCTCATTGT CCCAACTTCCTGTTCCACAAGGAAGAAAACTTCTGGCTGCTTCTAGCCAACGTGGCATCT AATGATGTCTGGTTGTCACAGAAAGTCAGCTTCATGGATGAGGCCACGGCCATAACTGCA GCATCAAAAGCTATACAAGAGACCCAGGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGA AATGCAGTTAGGGAGGCAGTTGACAGGGTGAAGAAAGGCAGTAGGCTGGTAATGGGCAAG TTCCAAGCCCCAGCAGAGGGTACTCACAACCTCACCTCTTTTTGTTTGTGCGACGCTTGG ATAGGCTGTGACACGAAGACCAGCTTCAAGCTCAAGGTCCTGAAGCGCAGCCGTGCTGGA ACAAGAGGCCATGTGCCTGAAGAAGGGCCAGTGGCTGCTGCAGAGGATGGTATTGAGGAG GAAGAGGAGGAAGAGGAAGAGGAGTATGATGACTATGAGAGCGAGTACAGTGATGACGAG GAGGACGCGAAGAACAAGGGGGAAGGGAAGGGGAAGGTTGTGAACGGATCGGCCCATCAA GGGGCTGAATCTGATATTGATTCAGGCAGCGATGAGTAA

Peptide Sequence

PEP ID	Zm00001d004119_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:2:83934108:83945752:-1 gene:Zm00001d004119 transcript:Zm00001d004119_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:DnaJ protein ERDJ2A
Sequence	MKKKYILPGELFLRLFSHTYPEAHKYFIEYISKAYQALTDPISRENYEKYGHPDGRQGLQ MGIALPKFLLNIDGASGGIMLLGIVGFCILLPLMIAVIYLSRSSKYTGNYVMHQTLSTYY YFMKPSLAPSKVIDVFIKAAEYMEMPVRRSDDEPLQKLFVAVRSELNLDLKNIKTEQAKF WKQHPSLVKMELLIQAHLTCESFALTPALLKDYRHMLELAPRLLEELVKIAVLPRNPHGF GWLRPALSVIELSQNIIQAVPLSARKASGANSEGIAPFLQLPHFTEATVKKIARKKIRAF QELCDMPVEDRAALLTQVAGLSEEQARDVEFVLEMIPSIEVDMKCETEGEEGIQEGDVVT MYAWVSLQRRNGLTAALPHCPNFLFHKEENFWLLLANVASNDVWLSQKVSFMDEATAITA ASKAIQETQEALGASAKEIGNAVREAVDRVKKGSRLVMGKFQAPAEGTHNLTSFCLCDAW IGCDTKTSFKLKVLKRSRAGTRGHVPEEGPVAAAEDGIEEEEEEEEEEYDDYESEYSDDE EDAKNKGEGKGKVVNGSAHQGAESDIDSGSDE

Transcript Sequence

Transcript ID	Zm00001d004119_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:83934108:83945752:-1 gene:Zm00001d004119 gene_biotype:protein_coding transcript_biotype:protein_coding description:DnaJ protein ERDJ2A
Sequence	GCTCCGCCTGCCGGCGACCCCTCAGATCCGCGCGCCCCGTACCACCTCCCGCCGCCTCAC TGCCAGATCCGGCCCTGGCTCCGCAAAATCCTGCGACATCGCAGACGAGCCGGGCGGGAG AGCGGAGGTAGGTCACAGCAGCCATGGCGGCCGCAGAGGAGAACAGCTCGCTGTTCCTGA TTTTTATACTCACCATGATCGCGCTGCCCCTCGTGCCCTACACGATCCTGCGCTTGTGTC GCGCTGCCTCCGAGAAGGCGAAGACCATCCACTGCCGCTGCTCGGGTTGCCACCGCTCCG GCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCCACGTGCAGTAACCTAA CCATCCTTCTGCTCTGGATTGTTATGATATTCCTGGTTTACTACATAAAGCTTGTTAGCC GTGAGGTCCAAGTTTTTGAGCCTTTCAGTATTCTTGGACTGGAAGCTGGGGCATCTGAAT CTGATATCAAGAAATCATATAGGAGACTTTCTATTCAGTACCATCCTGATAAAAATCCTG ATCCAGGTACCTCATTTGTAACACTATAATAAATTATTAATGTTGCTCAATGAAGAAAAA ATATATCTTACCTGGTGAACTCTTCTTACGCCTTTTCTCCCACACATACCCAGAGGCTCA TAAATACTTCATTGAATATATATCCAAGGCATATCAAGCATTAACTGATCCTATATCTCG TGAGAATTATGAGAAATATGGTCACCCTGATGGGCGGCAGGGGCTGCAAATGGGCATTGC TTTGCCCAAGTTTTTACTAAATATTGATGGTGCATCTGGTGGGATAATGCTTCTTGGAAT AGTCGGATTTTGTATATTATTGCCTTTGATGATAGCTGTTATTTATTTGTCAAGATCATC AAAATATACTGGAAACTATGTCATGCATCAAACTTTGTCCACTTACTACTACTTTATGAA GCCATCTCTTGCTCCAAGCAAAGTTATAGATGTCTTCATCAAGGCTGCAGAATATATGGA GATGCCAGTTCGACGCAGTGATGATGAACCCCTGCAAAAATTGTTTGTAGCTGTTAGAAG CGAGTTAAATCTGGACTTAAAGAACATTAAGACAGAACAAGCAAAGTTCTGGAAGCAGCA TCCATCACTAGTAAAGATGGAACTGCTGATTCAGGCGCATCTCACTTGTGAGTCATTCGC TTTGACGCCAGCACTTCTTAAAGATTACAGACACATGCTTGAACTTGCACCTCGTCTTCT GGAAGAACTCGTTAAGATTGCAGTTTTACCAAGGAATCCCCATGGTTTTGGATGGCTCCG GCCTGCACTCAGTGTTATTGAGCTTTCTCAAAATATTATCCAGGCTGTACCATTAAGTGC ACGAAAAGCTAGTGGTGCTAACTCGGAAGGAATAGCGCCTTTCTTGCAGCTGCCACATTT CACAGAAGCAACCGTGAAAAAGATTGCTCGCAAGAAAATCCGTGCATTCCAAGAACTTTG TGACATGCCTGTGGAAGATCGTGCTGCATTGCTCACACAAGTTGCTGGGCTTTCTGAAGA ACAAGCTCGGGATGTAGAGTTTGTACTGGAGATGATTCCTTCTATTGAAGTAGACATGAA ATGTGAGACTGAAGGTGAAGAGGGCATTCAAGAGGGTGATGTCGTGACCATGTATGCTTG GGTCTCGCTACAACGGCGCAATGGACTGACTGCTGCTCTTCCTCATTGTCCCAACTTCCT GTTCCACAAGGAAGAAAACTTCTGGCTGCTTCTAGCCAACGTGGCATCTAATGATGTCTG GTTGTCACAGAAAGTCAGCTTCATGGATGAGGCCACGGCCATAACTGCAGCATCAAAAGC TATACAAGAGACCCAGGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGAAATGCAGTTAG GGAGGCAGTTGACAGGGTGAAGAAAGGCAGTAGGCTGGTAATGGGCAAGTTCCAAGCCCC AGCAGAGGGTACTCACAACCTCACCTCTTTTTGTTTGTGCGACGCTTGGATAGGCTGTGA CACGAAGACCAGCTTCAAGCTCAAGGTCCTGAAGCGCAGCCGTGCTGGAACAAGAGGCCA TGTGCCTGAAGAAGGGCCAGTGGCTGCTGCAGAGGATGGTATTGAGGAGGAAGAGGAGGA AGAGGAAGAGGAGTATGATGACTATGAGAGCGAGTACAGTGATGACGAGGAGGACGCGAA GAACAAGGGGGAAGGGAAGGGGAAGGTTGTGAACGGATCGGCCCATCAAGGGGCTGAATC TGATATTGATTCAGGCAGCGATGAGTAATTCTATACTGTGTTATGTTGAGAAAGGAACGT AGAGGTTGACACCATCTGTTTTTTTTTTTAAAATTGAACGTATCCCCTCCATTTTATAGA TGGTCATAGTTACTCAGTTTTGT