Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004020_T017
CDS Infomation

cds chromosome:B73_RefGen_v4:2:76069746:76077481:-1 gene:Zm00001d004020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGGCGCAAGCCCTAGTACCGGCGCAAGGTCCCGACGAGGCGCCCCTCGATGCG
TCCGCCATTCATAGCCGGGTGGAGCAGCTCTCATTGAAAAGGCTGGAGGTGGAGCCGGAG
GCGGAGGTGGCGGAGGATGAGGTGGCACTAGGTTTGGACTCCACGCACAAGGCGGCTCAG
GATGCGATGGATGAGTGGGACTCGGCCACTGCTGCGGTTTCAATTGATGATTTGGATGCA
TACCTGGAACAACTGAGAAAGGATGTAGCCATGGCAGAGCAGGGGAATCAGAAGGTATCT
GGTGAGATTAGTGTCACTGCAGAGACAACATTCAATGATATGATTCAATTGGATGTTGGT
ATTGAAATGCTGGAGTCTTTGATTTCGAATCTTGGTCCAAAGGCTTTGAACCATTTTGAT
GAAAGTTCTGTTCTGGGGCTGTCAGACTCAACTGATTCATGCAGAAATCGAAGCATTGCT
GACAAGGACTACATATATGAGGTGTGCTTGTATGTTTACAATGACATGTTCTATTTTCTT
AGATTTACTGAACTTACTTGA

Peptide Sequence

PEP ID

Zm00001d004020_P017
PEP Infomation

pep chromosome:B73_RefGen_v4:2:76069746:76077481:-1 gene:Zm00001d004020 transcript:Zm00001d004020_T017 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEAQALVPAQGPDEAPLDASAIHSRVEQLSLKRLEVEPEAEVAEDEVALGLDSTHKAAQ
DAMDEWDSATAAVSIDDLDAYLEQLRKDVAMAEQGNQKVSGEISVTAETTFNDMIQLDVG
IEMLESLISNLGPKALNHFDESSVLGLSDSTDSCRNRSIADKDYIYEVCLYVYNDMFYFL
RFTELT

Transcript Sequence

Transcript ID

Zm00001d004020_T017
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:76069746:76077481:-1 gene:Zm00001d004020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGTTTCGAAAACCAAATCTCTCTGTCTACTAGGCGGGAGAGTGAGACGGCCATGGCGGAG
GCGCAAGCCCTAGTACCGGCGCAAGGTCCCGACGAGGCGCCCCTCGATGCGTCCGCCATT
CATAGCCGGGTGGAGCAGCTCTCATTGAAAAGGCTGGAGGTGGAGCCGGAGGCGGAGGTG
GCGGAGGATGAGGTGGCACTAGGTTTGGACTCCACGCACAAGGCGGCTCAGGATGCGATG
GATGAGTGGGACTCGGCCACTGCTGCGGTTTCAATTGATGATTTGGATGCATACCTGGAA
CAACTGAGAAAGGATGTAGCCATGGCAGAGCAGGGGAATCAGAAGGTATCTGGTGAGATT
AGTGTCACTGCAGAGACAACATTCAATGATATGATTCAATTGGATGTTGGTATTGAAATG
CTGGAGTCTTTGATTTCGAATCTTGGTCCAAAGGCTTTGAACCATTTTGATGAAAGTTCT
GTTCTGGGGCTGTCAGACTCAACTGATTCATGCAGAAATCGAAGCATTGCTGACAAGGAC
TACATATATGAGGTGTGCTTGTATGTTTACAATGACATGTTCTATTTTCTTAGATTTACT
GAACTTACTTGATTTATTTTTTTAGTTGGAACTTGATCACCAAATAGAAAAAAGTACGAT
GGAACTTGAAATTTTACAACATCTACAAAGGTAATGTATTGCACATGTTCTTTTTTATAT
TGAACACAAGGAACTAAAGATATCATTCACCTTTAGTCTATATACTAACCAGTTGCCCGT
GCTTTTACTACGGACCCTAAATATATCATATAAATAGGCATTGAGATATTTATTCAAATA
TAATTATTTTTTTATTTCTAAATGCTAAATTACGTGTAGTTTGGTGGTTAGCCCCAAATT
TCTAGAGTAGTGGACGTGTGTTCAAATGCTCACTTTGCACTAATTTTTATATAATTATTG
TTTATTTCTAAACACTAAGGTACGTGTGGTCTGGTGGTGGCTGCGCGGGCGCTGGGATCC
ATAGGGCAGTAGCTGAGAGCGTGCTGAGCGTGGGGCCAATAGGGCACGACGCCGAGGCGG
GGGTCACGTGGGGTGGGCCCAGTGTGTCAGGCGGGGTGAAGCCGTGGTAGCACCAGGGTG
CTGTTTGGTTCAAAAAATGTAACGCAAATGGTAATGGTAATGGTTTACGCTTGATTACTG
ACGGTAACAAATTTGAATAGGCTGGTATCAAATTTTAGTGTGGTATCTGATTACGGTTGG
ACTAAAACAAACATGATTTAACGTTATCCGTTACCCATTACGTTACAAATATGTGAACCA
AACGACACCCAGGTGTCCACCTTCCGTTCTTAATAGTAGTAGGGATAGGGATATCAATAT
CAATTCTAAGTAGTAGTGAGTATTACTTTGTAAGTCTGTGTTAGAGTGGACGCAATAACC
AGTTCAACCCAAAAGCTTAAGCGGGTTCGAAGCAACCTCTGAGGGAAGGATTGCTTCGGT
TTATCCCTTCCTTAGACACCACTCATGTGGAGCCTTCGGCACTGGGTTTGTTATTTTTTT
ATCAGTTCTAAGTAAAGCATTTTAACACATACTAAACTATGATTGGTAGCACATCTTGAA
TTTCTTATGCACCTATGTTGACTGATGAGAGTATTACTAAAAAAACTCGACCTGTGGGGG
TAAGACCATCCCCACACCATTTCATTTAAGAAGACCTTCTCATTCAGGTCGAGCATACTC
CACCCATACACAGTGGCACCGTAGCCCATGTGAGAATGACCGCAACCGGGACCGGGCCTT
AGACTCGTGCTTTGTCCCGTCATAGAATAGACGAGAGGATTTTTTATAACCACAGCCTTA
AATTTACTCCCACAGGGAGTCGAACTCAGGACCTGAGAAGGTCTACTTAGACCACCTAAC
CAACTCAGTTAATGGACTGTTTTCTGGAGTCTTCATTCATCTTTACTTCACACCCATCCT
TTCAGCATTCAAAATCTTTTGCAGGGACTTCTAGTCCCAACAATATGCTCGTATATGCAT
GCCTGAATCAGTTTTGAATTCATTGCTCGTTTTTTGTTGTGCATCGTTTTTTCGTATATA
CATGTCCAACAACTAAGTGTGGCAGAGATGCGTATGTTGCGCTGGATATGTGGCCACACA
AGGAGAGATCGAGTCCGGAATGATGATATACGAGAGAGAGTAGGAGTGGCGCCAATTGAG
GAGAAGCTTATGCAACATCGCTTGAGATGGTTTGGACATATCCAACGAAGACCTGAAGAG
GCACCAGTGCATATCGGAATAATTAGGCGTCCCGAAAATGTGAAGAGAGGTAGAGGTCGA
CCAACTTTGACGTGGACAGAGGCTGTGAAGAGAGACCTGAAGGAGTGGAATATTGACAAA
GAGCTCGCCGCAGATAGGAAGGGGTGGAAGTGTGCAATTCACGTGCCAGAACCCTGATTG
ATAGTTTCGCTTTTCCTCCTTAATCGTTTGACCTTTTCTTGTGTCCATTTTAGATCTTGC
TGGTCCTTGTGGGTTTTATCTCTTTTATGTGTTTCCCCGTTTCGTTGTTTTCGGTTCTCC
TTTGCCTTTGTTTCCCTTTTCTGTTCTTTGGGGGTTGAGCTCTGAGGTTTTCATACGGGG
TTTCATCTCTAGCCTACCCCAACGTGCTTGGGACAAAAAAGGCTTTGTTGTTGTTGTTGT
TGTTGTTGTTGTATATATTCATATAGTCATGAACTCATGGTTAATTATTCAGATTGTACT
GTTCAATGTCCAATGTCCTTCAAACTATATCTTTGCATGGTTGATCTGTTTTCAACTCAA
GCAAATTAAAGGTTTGTGTCATCTTCTACTCTTCGTCATAATTGCTTACTGTTATTACCA
TTAGTCAGCAAGTGTTGTCTATTTCCATTAAATCAATGTCTTCTTTTTTCCGGTACTGTT
GTGAGCAATCATAGCAGGTATCCTATGTTAGCAGTTATGAGTTTACTATGCTATGGATCG
ATGGATTTCTTTCTGACATCCCTAAACCTCTATATCCAGGGATGATGAAATGTTTCAACT
TGAATCTAAGTTATTGCCATTTGGAGCGAAGATCTTAGACTTTAAAGACGACTGTCTCAG
GATGTTCCTCAAGGCACCAATATTGACCTCAGATTGTGAAATTTATGGACAGAAGTTTAA
TTGTTCTATTGATTCATTTATTTCAGACCATGAGCTGCTGATAGAAATTGATAAAATAAA
TATGGAACCAAAGAAAGTACAGATCATTCCTGATGACATGTCTGTAGATATACTGATTGA
GAGGATGGAGTCCTCCAGAGATACAGTTTGTTCTCCAACCTTGATATGGCTAATTCAGCA
ATGCCAACACCAGTCTATAATCAATGCTTTGAGACGATCATTGGTGAATGATGCTAATAG
TTCGAGGTGACATTATTTGTCCATCTGCTAGCACCGTAGTATAATTAGTTAGGAATATCT
TCATATCAAACTGTTCTTAAAAGTTTGCAATATTTTATTAGGACATTGTGAACATATAAC
TGTTGTTTATGCTGTTAACTGCAATGGAACCATGCTCTCAAAACTTGTTCCTTGAGTTTG
TACTGTGTAACCTTGCCTTTTGTTGCTGTTTATTAGTAATTATTACGGGAACTGTCCTTG
GTTTTGCTCCCTAATGTGGTCAAGCACCCCTAGGCCTGAGTGATTCATCCCACCAAGGTT
CCACCTGCCTGGAACCATAGCACAGAGGTCAAGGACACTATCTCAGCCACAGCATAGCCC
CCTTCTTGCAGTGCATAATCGATGCTGAAGTGCTGCATGGAATCATGCAGTCACTGGCAC
TGCTGACAGCGCCAAGCATAAAAGTGGGGAGGAAAATGACTTGCGTTCAGGAGAGAACAA
AGAGTGGAATGCGAAGAGGTCTGAGAGAGGAACAAGTACCATAAGCAGAGAAGAGGTCGA
TCCTGTTCTGTGCTCCTGGCAGTAAACTAGAGAGGGAAACATAGAGAGAAGGGGGAGGGT
ATAGACATGAGGGATCTTAAGGTTATTTTGTCACGGTCAACAGCTTGGATGGATGGTGTT
AGGGCTCATGGCATTCAAATCAGTGGCATCTCACTAATAATTTGAAAAAAAGCAGTGTAT
GTCAAAAAAAACATTTGACTCATGAAATAACCTAAACTTTCCATGTATTTGTTTATCAGT
CCTTTTATCCCTTTACATCTTAAAATCAGTTATCTCAGCATTATTGTACAATCATAAAAT
TATTCTCTTTACAATTGCCCATGACAATGTTGATGCAAGACTTGTCTAGTGAAGCTTGAC
CTAATATTTAGAGAGCATGGATCCTAAACCGTCTCCTAGTATTCAACTTAACCTTTTTGG
AGAAACTTCTTTTTTTTTCTCAGGCATTGTTTTGAGTACTTAAACAAAAAGGAGATGATT
GTTGCTCACTTAGATCGTGGTATTGATGTCTCCATCAAGATGTCTTCAGATTGGCCTCTT
TGTTCCTATGGCCTGAAGCTAATTTCGATCCGCAATGCAGGGGATCGTCCAACAAATATT
GCTTCAACTATACTTTGTAAGACCAAGGAACTGGCCAACGAATTGGAGCCGCAGATTCGG
CAACATCTTCTAACGCTTGTGGATGCTGTTGAAGATATTATCATTCGAGAGCTGCGGTCT
CGTTAGGACCACGCTGTCGACAGGAATAGCTTTGGGGGATAATAGACAGCCTCTACTGGC
TCGTGGATCAATGTTTCACTTTCACATTTTGTACAGAAGCGACTCTATCACCGTTACGCA
TCTACGGCTGATTTTTTTAGTGTCTGGCGCGTTGCCAGAAAAGAGAATCTTGTTCAACTT
T