Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003931_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:69777965:69780202:-1 gene:Zm00001d003931 gene_biotype:protein_coding transcript_biotype:protein_coding description:ACR4

Sequence

ATGGCTCTCATGGCGGCGGGGATGGACGACCACGACGAGTACGCCAAGCTCGTCAGGAGG
ATGAACCCGCCCAGGGTTGTGATCGACAACGAGGCCTCCGACGACGCCACCGTGATTAAG
GTAGACAGCGTCAACAGCCACGGCACGCTGCTCGCCGTCGTCCAGGTCATCGCCGACCTC
AACCTCGTCATCCGGAAGGCATACTTCTCCTCCGATGGAAACTGGTTCATGGATGCGTTC
AATGTCACCGACCGTGACGGCAACAAGGTTCTGGACGCCTCAACCATCTCCTACATCCAG
AAGACGCTGGAGGTGGACGACTGGTACTACCCGGGGGCGCACAACACGGTGGGCATCGTG
CCGTCGGGGGACTACACCTCCATCGAGCTCACGGGCACGGACCGCCCGGGCCTGCTCTCC
GAGGTGTGCGCGGTGCTCGCGGCCATGGGCTACGCGGTCCAGAGCGCGGAGCTGTGGACG
CACAACACGCGCGTGGCCGCCGTTGTGCACGTCACGGACGCCGAGACTGGCGGCGCCATC
GAGGACTCCGCCCGCATCGCCGACATCAGCGCGCGCTTGGGCAACCTGCTGCGCGAGCAC
AGCGACGTGCGCGCTGGCGGCGGCGCGGGCAGCCTGGCACTCCACAAGGAGCGGCGGCTG
CACCAGATGATGTTCGACGATCGGGGAGTGGAAGGCCACGCCGCGGCCGCGCCGCCCGAC
GGCTCGCTGCGGACGGAGGTGTCCGTGACGCATGCCGAGCGCGGGTACACCGCCGTTGTG
GTCCGGTGCCGGGACCGGCCCAAGCTGCTGTTCGACACCGTGTGCACCATCACGGACATG
GAGTACGTGGTGCACCACGGCACCGTGAGCGCGGAGCCCGGCGGCGGCGCGTACCAGGAG
TACTACATCCGCCACGTCGACGGCCACGCCATCCGGTGCGAGGACGAGCAGCAGCGCCTC
GTGCGGTGCCTGGCTGCCGCCATCGAGCGACGCACCGCCGACGGACTTGAGCTGGAGGTG
CGGACGGGAGACCGCGCGGGCCTGCTCTCGGACATCACCCGCATCTTCCGGGAGAACGGG
CTCACCATTCGCCGCGCCGAGATCTCGTCCTCCGACGGCGAGGCCGTGGACACGTTCTAC
CTATCCGACCCGCAAGGCCTCCCCGTGGAGACCAAGACCATCGAGGCCATCCGTGCACAA
ATCGGCGAGGCCACGCTGAGGGTGAGGAACAACCCGTTCGGTACCGGGGACGACGCCGAC
ATGGCCGGCGCTGGCACAACGGCGTTCATCTTCGGGAACCTGTTTAAGTTCTACAGGCCG
TTCCAGAGCTTCAGCCTCATCAAACTCTACTCGTGA

Peptide Sequence

PEP ID

Zm00001d003931_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:69777965:69780202:-1 gene:Zm00001d003931 transcript:Zm00001d003931_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ACR4

Sequence

MALMAAGMDDHDEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADL
NLVIRKAYFSSDGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIV
PSGDYTSIELTGTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAI
EDSARIADISARLGNLLREHSDVRAGGGAGSLALHKERRLHQMMFDDRGVEGHAAAAPPD
GSLRTEVSVTHAERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQE
YYIRHVDGHAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENG
LTIRRAEISSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPFGTGDDAD
MAGAGTTAFIFGNLFKFYRPFQSFSLIKLYS

Transcript Sequence

Transcript ID

Zm00001d003931_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:69777965:69780202:-1 gene:Zm00001d003931 gene_biotype:protein_coding transcript_biotype:protein_coding description:ACR4

Sequence

GGAGCGCATCGCATCAGCGTCACCAATACCACGCGAGCCGTCCCCCCCTCCTTGTCCATC
CCCGGCCGGCACGACGAACCGCCTGAGGAGGGAGCAATAGCTCGGGGCTCTCGCTCTTGG
CTGCGTGTCTGAAGCTGTTGATGCGAGTGAAGGCTCGGTTTCCATGGCTCTCATGGCGGC
GGGGATGGACGACCACGACGAGTACGCCAAGCTCGTCAGGAGGATGAACCCGCCCAGGGT
TGTGATCGACAACGAGGCCTCCGACGACGCCACCGTGATTAAGGTAGACAGCGTCAACAG
CCACGGCACGCTGCTCGCCGTCGTCCAGGTCATCGCCGACCTCAACCTCGTCATCCGGAA
GGCATACTTCTCCTCCGATGGAAACTGGTTCATGGATGCGTTCAATGTCACCGACCGTGA
CGGCAACAAGGTTCTGGACGCCTCAACCATCTCCTACATCCAGAAGACGCTGGAGGTGGA
CGACTGGTACTACCCGGGGGCGCACAACACGGTGGGCATCGTGCCGTCGGGGGACTACAC
CTCCATCGAGCTCACGGGCACGGACCGCCCGGGCCTGCTCTCCGAGGTGTGCGCGGTGCT
CGCGGCCATGGGCTACGCGGTCCAGAGCGCGGAGCTGTGGACGCACAACACGCGCGTGGC
CGCCGTTGTGCACGTCACGGACGCCGAGACTGGCGGCGCCATCGAGGACTCCGCCCGCAT
CGCCGACATCAGCGCGCGCTTGGGCAACCTGCTGCGCGAGCACAGCGACGTGCGCGCTGG
CGGCGGCGCGGGCAGCCTGGCACTCCACAAGGAGCGGCGGCTGCACCAGATGATGTTCGA
CGATCGGGGAGTGGAAGGCCACGCCGCGGCCGCGCCGCCCGACGGCTCGCTGCGGACGGA
GGTGTCCGTGACGCATGCCGAGCGCGGGTACACCGCCGTTGTGGTCCGGTGCCGGGACCG
GCCCAAGCTGCTGTTCGACACCGTGTGCACCATCACGGACATGGAGTACGTGGTGCACCA
CGGCACCGTGAGCGCGGAGCCCGGCGGCGGCGCGTACCAGGAGTACTACATCCGCCACGT
CGACGGCCACGCCATCCGGTGCGAGGACGAGCAGCAGCGCCTCGTGCGGTGCCTGGCTGC
CGCCATCGAGCGACGCACCGCCGACGGACTTGAGCTGGAGGTGCGGACGGGAGACCGCGC
GGGCCTGCTCTCGGACATCACCCGCATCTTCCGGGAGAACGGGCTCACCATTCGCCGCGC
CGAGATCTCGTCCTCCGACGGCGAGGCCGTGGACACGTTCTACCTATCCGACCCGCAAGG
CCTCCCCGTGGAGACCAAGACCATCGAGGCCATCCGTGCACAAATCGGCGAGGCCACGCT
GAGGGTGAGGAACAACCCGTTCGGTACCGGGGACGACGCCGACATGGCCGGCGCTGGCAC
AACGGCGTTCATCTTCGGGAACCTGTTTAAGTTCTACAGGCCGTTCCAGAGCTTCAGCCT
CATCAAACTCTACTCGTGATGCGCACTTGGGTAGCAATTTTTTCACATGTTTTAGATAGT
TTTTACTGTGGTTAGCTGTTCTGCTCTGGAGATTTTCCAATAGTGTGTAAATATGGCTAT
GGATGATGATGGCGATATATACGGATACAGTCCAGTGTAAGTATAAGTATATAGTTAGGC
AAGGTTATGTAGCTGCATTGCATGGTTAGGAAGAATGATAGTTTTATTGTAGCTCTATAG
CTTCCAACAAGTTAGTGTATAACAGCATCTCTTTGAG