Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003895_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:65735278:65739011:1 gene:Zm00001d003895 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 46
Sequence

ATGCAGGGGCGCAGCAGGGACGCCGCCACCATTGCTGCAGCGGTGGCGTGCGCAGCTGTG
CTGCTCCTCGGCGACGCCTGGAGCGTCTCGGCGCAGGCGGCGGCGGAGGAGGACAAGATA
AGCGCCCTGCCGGGGCAGCCGCCGGTGGGCTTCGCACAGTACTCCGGTTACATCCCGGTG
GACGCCGCGGGGAAGCGCTCCCTCTTCTACTACTTCGCCGAGGCGGAGGCGGATCCGGCG
GCCAAGCCGCTCGTGCTCTGGCTCAATGGAGGGCCTGGGTGCTCATCCGTGGGAGTGGGG
GCGTTCTCAGAGAATGGGCCGTTCAGGCCTAGCGGCAATGCGCTAACGAGGAACGAGTAC
AGCTGGAACAAAGAGGCCAATATGCTGTATCTGGAGAGCCCTGCAGGGGTTGGCTTTTCA
TACTCCACTGATCCTGCCTTCTATGAGGGTGTTGGTGACAGCATGACAGCCAGAGACAAC
TTGAAGTTCTTGCAAGGCTGGTTCGCCAGGTTCCCGCAGTACAAGGGCAGGGACCTGTAT
ATCACAGGAGAGAGCTACGCTGGCCACTACGTTCCACAGTTAGCCCAGCGCATGGTTGAG
TTCAACAAGAAGGAGAAGCTATTCAACCTGAAAGGCATTGCTCTTGGCAACCCTGTGCTG
GAGTTCTCCACCGACTTCAACTCGCGGGCGGAGTTCTTCTGGTCGCACGGCCTGATATCG
GACTCCACCTACAACATCTTCACGACGGTGTGCAACTACTCGCGGTACGTGAGCGAGTAC
TACCGCGGCTCCCTGAGCACGGCCTGCGACAGGGTGATGAGCCAGGTGGCGAGGGAGACG
AGCAGGTTCGTCGACAAGTACGACGTCACCCTGGACGTCTGCATCTCGTCGGTGCTCATG
CAGTCCCAGGTCCTCGTCCCTCAGCAAGGGAGCAGGGAGCTGGACGTGTGCGTGGAGGAC
GAGACGATGCGGTACCTGAACCGGAAGGACGTGCAGCAGGCCATGCACGCGCGCCTCGAC
GGCGTGCAGAGGTGGACGGTCTGCAGCAGCAGCGTTCTGGAGTACAAGCAGCTGGACCTC
CAGATCCCGACCGTGAACACCGTGGGCGCGCTCGTGAAGGCGGGCATCCCCGCGCTGGTG
TACAGCGGCGACCAGGACTCGGTGATCCCGCTGACGGGCAGCAGGACGCTGGTGGGGCGG
CTGGCGGCCAGGCTCCGGCTCAACGCCACGGCGCCGTACCGGGCCTGGTTCCAGGGGAAG
CAGGTGGGCGGGTGGACGCAGGTGTTCGGCGGCGGCGCCCTGTCCTTCGCCACGGTGCGC
GGCGCGTCCCACGAGGCGCCCTTCTCGCAGCCCGAGCGCTCGCTCGGCCTCTTCAGGGCG
TTCCTCGCCGGACAGCAGTTGCCGGAATCGTTCCAGTGA

Peptide Sequence

PEP ID

Zm00001d003895_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:65735278:65739011:1 gene:Zm00001d003895 transcript:Zm00001d003895_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 46
Sequence

MQGRSRDAATIAAAVACAAVLLLGDAWSVSAQAAAEEDKISALPGQPPVGFAQYSGYIPV
DAAGKRSLFYYFAEAEADPAAKPLVLWLNGGPGCSSVGVGAFSENGPFRPSGNALTRNEY
SWNKEANMLYLESPAGVGFSYSTDPAFYEGVGDSMTARDNLKFLQGWFARFPQYKGRDLY
ITGESYAGHYVPQLAQRMVEFNKKEKLFNLKGIALGNPVLEFSTDFNSRAEFFWSHGLIS
DSTYNIFTTVCNYSRYVSEYYRGSLSTACDRVMSQVARETSRFVDKYDVTLDVCISSVLM
QSQVLVPQQGSRELDVCVEDETMRYLNRKDVQQAMHARLDGVQRWTVCSSSVLEYKQLDL
QIPTVNTVGALVKAGIPALVYSGDQDSVIPLTGSRTLVGRLAARLRLNATAPYRAWFQGK
QVGGWTQVFGGGALSFATVRGASHEAPFSQPERSLGLFRAFLAGQQLPESFQ

Transcript Sequence

Transcript ID

Zm00001d003895_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:65735278:65739011:1 gene:Zm00001d003895 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 46
Sequence

ACCGCCCTGTGCCTGCAGCTGCACCCTGCAGCGCTCACTCGCTCACTGACTCACTCCCCT
CCCCTGGCCTCCTCCTCCTCCTCCTCTCTCTCTCTCCACTATCTCCCACAGCCGAACCAA
CATGCAGGGGCGCAGCAGGGACGCCGCCACCATTGCTGCAGCGGTGGCGTGCGCAGCTGT
GCTGCTCCTCGGCGACGCCTGGAGCGTCTCGGCGCAGGCGGCGGCGGAGGAGGACAAGAT
AAGCGCCCTGCCGGGGCAGCCGCCGGTGGGCTTCGCACAGTACTCCGGTTACATCCCGGT
GGACGCCGCGGGGAAGCGCTCCCTCTTCTACTACTTCGCCGAGGCGGAGGCGGATCCGGC
GGCCAAGCCGCTCGTGCTCTGGCTCAATGGAGGGCCTGGGTGCTCATCCGTGGGAGTGGG
GGCGTTCTCAGAGAATGGGCCGTTCAGGCCTAGCGGCAATGCGCTAACGAGGAACGAGTA
CAGCTGGAACAAAGAGGCCAATATGCTGTATCTGGAGAGCCCTGCAGGGGTTGGCTTTTC
ATACTCCACTGATCCTGCCTTCTATGAGGGTGTTGGTGACAGCATGACAGCCAGAGACAA
CTTGAAGTTCTTGCAAGGCTGGTTCGCCAGGTTCCCGCAGTACAAGGGCAGGGACCTGTA
TATCACAGGAGAGAGCTACGCTGGCCACTACGTTCCACAGTTAGCCCAGCGCATGGTTGA
GTTCAACAAGAAGGAGAAGCTATTCAACCTGAAAGGCATTGCTCTTGGCAACCCTGTGCT
GGAGTTCTCCACCGACTTCAACTCGCGGGCGGAGTTCTTCTGGTCGCACGGCCTGATATC
GGACTCCACCTACAACATCTTCACGACGGTGTGCAACTACTCGCGGTACGTGAGCGAGTA
CTACCGCGGCTCCCTGAGCACGGCCTGCGACAGGGTGATGAGCCAGGTGGCGAGGGAGAC
GAGCAGGTTCGTCGACAAGTACGACGTCACCCTGGACGTCTGCATCTCGTCGGTGCTCAT
GCAGTCCCAGGTCCTCGTCCCTCAGCAAGGGAGCAGGGAGCTGGACGTGTGCGTGGAGGA
CGAGACGATGCGGTACCTGAACCGGAAGGACGTGCAGCAGGCCATGCACGCGCGCCTCGA
CGGCGTGCAGAGGTGGACGGTCTGCAGCAGCAGCGTTCTGGAGTACAAGCAGCTGGACCT
CCAGATCCCGACCGTGAACACCGTGGGCGCGCTCGTGAAGGCGGGCATCCCCGCGCTGGT
GTACAGCGGCGACCAGGACTCGGTGATCCCGCTGACGGGCAGCAGGACGCTGGTGGGGCG
GCTGGCGGCCAGGCTCCGGCTCAACGCCACGGCGCCGTACCGGGCCTGGTTCCAGGGGAA
GCAGGTGGGCGGGTGGACGCAGGTGTTCGGCGGCGGCGCCCTGTCCTTCGCCACGGTGCG
CGGCGCGTCCCACGAGGCGCCCTTCTCGCAGCCCGAGCGCTCGCTCGGCCTCTTCAGGGC
GTTCCTCGCCGGACAGCAGTTGCCGGAATCGTTCCAGTGACGACGGAACGTTCCTCTTCC
TCGTCTAGTGTATGTTCATTGTAAGCGTGTACGTGCAGCTCACCGTATGTCGTCATCATC
CGGCCGCTCGACACTGGCAAAACAACCCAAATGGGTTCTTGTTCTTCTCCAGGTGTAATC
AGGACGAAAATAATATCATTGGGAGGGATGAGATTGTGTGTCGTCGGATATACCGCGGAC
GGCTTTCAATGTTGTAGGCTTAGTACAACTGTAATATGCACATGCTGGTTCAAATTTGGC
ATGTGAGGCGAAGAACCTGGAGATTTGG