Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003889_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:65457795:65460979:1 gene:Zm00001d003889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trihelix transcription factor ASR3
Sequence

ATGTCGAACGCCGGCGAGGCCAGAGGCGTGGGGACGGGCCGCGGGTCGCGGCTACCGCGG
TGGACGCGGCAGGAGATACTGGTGCTCATCGAGGGGAAGCGGGTGGTGGAGAGGAGCGGC
CGTGGCCGCGGCCGCGGCCGGGTACGGGGAGGAGAGGGCGCCGGCGCCGGCGGAGCGGCT
GCAAAGCCGACCAAGTGGGCGGCGGTGGCGGAGTACTGCCGGCGCCACGGCGTGGACCGC
GGCCCCGTGCAGTGCCGCAAGCGCTGGAGCAACCTCGCCGGGGACTACAAGAAGATCAGG
GAGTGGGAGCGCGGCTACGCGGCCAGGAAGGAGGCCTCCTTCTGGGCCATGCGCAACGAC
GCGCGCCGCGAGAGGCGCCTCCCGGGCTTCTTCGACCAGGAGGTCTACGACATCCTCGAG
GGCCGCGGCGCCGGGAATGCGGCGGCGCTGGAGGACGCGGAGGCCAAGGAGGAGGAGGAG
GTCAAGGCGAAGGCGGTGCTCCACACTGGCCGCGGGATCCAAGGGGGCGGCCTCTTCTCC
TCGTCTGAGGACGAGGATGACCAAGAAGACGACGCGGCCACGCCAAGTCCGACGCCGACA
CCGACACCGGCGCCGGCGCCGGCGCCGGCTGCGGTGGTCGTGCCGATCCCCGGAGAGCAA
GCTGTCCCGTTCTTCGCGCGTGCCTCCTCTCTTTCAGTGCATGTTACAGAGAAGACGGAT
GACGTGCTGCCCAGGCAAGCGAGCTCCGAGCAAGCAGGCACATCAAAAGAAAAGCAGCCG
GAGCAGATCACCGAGGACTCGCCAGCGGCGCAGTGCGGGCAGAAGAGGCAGCGCAGCGAT
GACAATGCCTCCGGAAGAGCCGCGACCAACCTGCAGGGGCAGCTGGTTGAAATCCTAGAC
CGGAGCAGCCAGATGGTGGCAGCGCAGCTAGAGGCGCAGAACATGAACAGCCGACTGGAT
AGGGAGCAGAGGAAGGATCAGGTGAGCAGCCTGCTTGGTGTGCTTGGCAAGGTGGCTGAT
GCCCTCTACAGAATTGCTGATAAGCTATAG

Peptide Sequence

PEP ID

Zm00001d003889_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:65457795:65460979:1 gene:Zm00001d003889 transcript:Zm00001d003889_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trihelix transcription factor ASR3
Sequence

MSNAGEARGVGTGRGSRLPRWTRQEILVLIEGKRVVERSGRGRGRGRVRGGEGAGAGGAA
AKPTKWAAVAEYCRRHGVDRGPVQCRKRWSNLAGDYKKIREWERGYAARKEASFWAMRND
ARRERRLPGFFDQEVYDILEGRGAGNAAALEDAEAKEEEEVKAKAVLHTGRGIQGGGLFS
SSEDEDDQEDDAATPSPTPTPTPAPAPAPAAVVVPIPGEQAVPFFARASSLSVHVTEKTD
DVLPRQASSEQAGTSKEKQPEQITEDSPAAQCGQKRQRSDDNASGRAATNLQGQLVEILD
RSSQMVAAQLEAQNMNSRLDREQRKDQVSSLLGVLGKVADALYRIADKL

Transcript Sequence

Transcript ID

Zm00001d003889_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:65457795:65460979:1 gene:Zm00001d003889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trihelix transcription factor ASR3
Sequence

GGGGGCCAGGGCCAGGGCCAGGGTCAGGGACAAGGAGCGAGAGCTCGCCGTACGCGAGCC
GGGCGGTATGTCGAACGCCGGCGAGGCCAGAGGCGTGGGGACGGGCCGCGGGTCGCGGCT
ACCGCGGTGGACGCGGCAGGAGATACTGGTGCTCATCGAGGGGAAGCGGGTGGTGGAGAG
GAGCGGCCGTGGCCGCGGCCGCGGCCGGGTACGGGGAGGAGAGGGCGCCGGCGCCGGCGG
AGCGGCTGCAAAGCCGACCAAGTGGGCGGCGGTGGCGGAGTACTGCCGGCGCCACGGCGT
GGACCGCGGCCCCGTGCAGTGCCGCAAGCGCTGGAGCAACCTCGCCGGGGACTACAAGAA
GATCAGGGAGTGGGAGCGCGGCTACGCGGCCAGGAAGGAGGCCTCCTTCTGGGCCATGCG
CAACGACGCGCGCCGCGAGAGGCGCCTCCCGGGCTTCTTCGACCAGGAGGTCTACGACAT
CCTCGAGGGCCGCGGCGCCGGGAATGCGGCGGCGCTGGAGGACGCGGAGGCCAAGGAGGA
GGAGGAGGTCAAGGCGAAGGCGGTGCTCCACACTGGCCGCGGGATCCAAGGGGGCGGCCT
CTTCTCCTCGTCTGAGGACGAGGATGACCAAGAAGACGACGCGGCCACGCCAAGTCCGAC
GCCGACACCGACACCGGCGCCGGCGCCGGCGCCGGCTGCGGTGGTCGTGCCGATCCCCGG
AGAGCAAGCTGTCCCGTTCTTCGCGCGTGCCTCCTCTCTTTCAGTGCATGTTACAGAGAA
GACGGATGACGTGCTGCCCAGGCAAGCGAGCTCCGAGCAAGCAGGCACATCAAAAGAAAA
GCAGCCGGAGCAGATCACCGAGGACTCGCCAGCGGCGCAGTGCGGGCAGAAGAGGCAGCG
CAGCGATGACAATGCCTCCGGAAGAGCCGCGACCAACCTGCAGGGGCAGCTGGTTGAAAT
CCTAGACCGGAGCAGCCAGATGGTGGCAGCGCAGCTAGAGGCGCAGAACATGAACAGCCG
ACTGGATAGGGAGCAGAGGAAGGATCAGGTGAGCAGCCTGCTTGGTGTGCTTGGCAAGGT
GGCTGATGCCCTCTACAGAATTGCTGATAAGCTATAGCCGCCACTGTGAGTGTGTCTTGA
GCACAGTAAATAATCGCTGCAAGAATGTACAGATTGGTACAGGTTGTTGGCGTCCTATTG
TTATTGTGGATTGGTTCTGAAATTTGGTCAGAAACCTGAAATGGGATGCCCCATTTTTTA
ACCCATGGGATGTAGCATTTGTATGCCCGTATGGCCCCAAAACTGTGTATTCTTACAGAG
GAATGGAAGTGCATATCTGATGACACAA