Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003867_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:64011725:64013387:-1 gene:Zm00001d003867 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extensin [Source:UniProtKB/TrEMBL;Acc:B6STT7]
Sequence

ATGGCAATACTGGTCATCACCATGGTGAACGTGCAGTGCTGCCACTGCAGAGCCAGCATC
ACCAAGATCCTGGAAAGCCACAAAGAGGAGTTTTGCATCGAGAAGATTGAATTCGAGGAG
AAGCTCAACAAGGTGATTGTACGCGGGAAGTTCGACGGCGAGAAGCTCAAGAAGGCGATA
CTAGACAAGGCCGGCGAGACCGTGAAGATCAAGGAGATAGCCCTCGTCGACAAGTGGCCA
CCCCCACCCCCACCTTCGCCTCCCCCGCCCAAACCGGAATGCAAGGTGGTGCCGTACCCT
TACCCGTACCCGTATCCGCCGTACCCGTGGTCGTGCCCACCACCTCGCCCGCCGTGCCAC
TGCTGCAAGCCGCCGACACCGTCGCCGCCGAAACCGCCGCCGCCACAGCCGACGCCGTGC
CAGTGCCACTGCTGCAAGCCGCCGACACCGTCGCCGCCGAAGCCGCCACCACAGCCGACG
CCGTGCCAGTGCCACTGCTGTAAGCCTCCGGCACCATCGCCGCCGAAGCCGACGCCGTGC
CAGTGCCACTGCTGTAAGCCTCCGGCACCGCCGCCGCCGAAGCCGCCGCCACAGCCGACG
CCGTGCTGCAAGCAGTGCGAGGACTCGCACGACAAGGATAAATGCAAGCGTTGCCCACCA
TGCCCGCCGTGCCCACCGTGCCCGCCGTGTCCACCGTGCCCGCCCAACTACTGGCCGCCA
CACCCGTGGCCCTGCCAGTGCCCACCACAGGACAGCCAGTGCACCATCGTGTGA

Peptide Sequence

PEP ID

Zm00001d003867_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:64011725:64013387:-1 gene:Zm00001d003867 transcript:Zm00001d003867_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extensin [Source:UniProtKB/TrEMBL;Acc:B6STT7]
Sequence

MAILVITMVNVQCCHCRASITKILESHKEEFCIEKIEFEEKLNKVIVRGKFDGEKLKKAI
LDKAGETVKIKEIALVDKWPPPPPPSPPPPKPECKVVPYPYPYPYPPYPWSCPPPRPPCH
CCKPPTPSPPKPPPPQPTPCQCHCCKPPTPSPPKPPPQPTPCQCHCCKPPAPSPPKPTPC
QCHCCKPPAPPPPKPPPQPTPCCKQCEDSHDKDKCKRCPPCPPCPPCPPCPPCPPNYWPP
HPWPCQCPPQDSQCTIV

Transcript Sequence

Transcript ID

Zm00001d003867_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:64011725:64013387:-1 gene:Zm00001d003867 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extensin [Source:UniProtKB/TrEMBL;Acc:B6STT7]
Sequence

TTCCTCCCACACCTCACCTACAAACTGCTCTATCTCTTGTGTTGTGCATCGACATCATTA
TTCAGGGTTAGAAGATGGCAATACTGGTCATCACCATGGTGAACGTGCAGTGCTGCCACT
GCAGAGCCAGCATCACCAAGATCCTGGAAAGCCACAAAGAGGAGTTTTGCATCGAGAAGA
TTGAATTCGAGGAGAAGCTCAACAAGGTGATTGTACGCGGGAAGTTCGACGGCGAGAAGC
TCAAGAAGGCGATACTAGACAAGGCCGGCGAGACCGTGAAGATCAAGGAGATAGCCCTCG
TCGACAAGTGGCCACCCCCACCCCCACCTTCGCCTCCCCCGCCCAAACCGGAATGCAAGG
TGGTGCCGTACCCTTACCCGTACCCGTATCCGCCGTACCCGTGGTCGTGCCCACCACCTC
GCCCGCCGTGCCACTGCTGCAAGCCGCCGACACCGTCGCCGCCGAAACCGCCGCCGCCAC
AGCCGACGCCGTGCCAGTGCCACTGCTGCAAGCCGCCGACACCGTCGCCGCCGAAGCCGC
CACCACAGCCGACGCCGTGCCAGTGCCACTGCTGTAAGCCTCCGGCACCATCGCCGCCGA
AGCCGACGCCGTGCCAGTGCCACTGCTGTAAGCCTCCGGCACCGCCGCCGCCGAAGCCGC
CGCCACAGCCGACGCCGTGCTGCAAGCAGTGCGAGGACTCGCACGACAAGGATAAATGCA
AGCGTTGCCCACCATGCCCGCCGTGCCCACCGTGCCCGCCGTGTCCACCGTGCCCGCCCA
ACTACTGGCCGCCACACCCGTGGCCCTGCCAGTGCCCACCACAGGACAGCCAGTGCACCA
TCGTGTGATCCACCGTCCACGTACGCTTCCTTTCTTGCAATCTGCCGCCTGCTGCGATCG
TCGTGTGATCTGTCCCAATAATCTCGCCCTAGTCGTGTACTTGGTTCTCGCGTTCGTTTG
TGTCGTTTGGGTTGTGTGGTGTGTGTCCTGTCTTGTCTTGTCTTGTAAACCATTCTCTCT
TTCAGCTGATGATGTGTTTATTCATTTCATGTTACTTTCTTAATAGCATCTTCGAGAGCA
TTGCTAAAAA