Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003857_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:63033369:63037024:-1 gene:Zm00001d003857 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calnexin homolog1 description: calnexin homolog1
Sequence	ATGGGAGGGCGCGCGCTCCTCCTCCTCCTCCTGGTCTCGGCGTTGGTCTTTCAGATCCAC GCCTCCGACCCGCTGCTGTACGAGCCGTTCGATGAGGACTTTGAGGGGAGATGGGTCGTC TCCAAGAAGGATGAATACCAAGGTGTGTGGAGGCATGCCAAGAGTGATGGTCATGAGGAC TATGGCCTCCTTGTTAGTGAGAAGGCAAGGAAATACGCCATAATCAAGGAGCTTGATGAG CCAGTTACCTTGAAGGATGGGACAGTGGTCCTGCAGTTTGAAGTGAGACTTCAGAATGGC CTTGAATGCGGAGGTGCCTACATTAAGTACATCCGCCCTCAGGATGCTGGATGGGATGCC AAGGAGTTTGATAATGAGACTCCATACACTATTATGTTTGGTCCAGATAAGTGTGGATCA ACCAACAAGGTTCATTTCATCCTTAAGCACAAGAATCCTAAGACTGGAAAGTATGTTGAG CATCATCTCAAATTCCCACCATCTGTCCCATATGACAAGCTCTCTCATGTCTACACGGCT ATCTTGAAGCCAGACAATGAGGTCAAAATTTTGGTAGATGGGGAAGAAAAGAAGAAGGCG AACTTCCTTTCTGCTGATGATTTTGAGCCAGCACTTATCCCATCCAAGACCATTCCTGAC CCTGATGACAAGAAGCCGGAGGACTGGGATGAGAGAGCTAAAATTCCTGATCCAGATGCA GTAAAGCCTGATGACTGGGATGAGGATGCCCCGATGGAAATTGTGGATGATGAAGCCACC AAGCCTGAGGGATGGTTGGATGATGAACCTGAGGAGATTGATGATCCTGAGGCAGCCAAG CCTGAGGACTGGGACGATGAGGAGGATGGTGAATGGGAGGCGCCAAAGATTGACAACCCC AAGTGTGAAGAGGCACCTGGATGTGGCGAGTGGAAGAGGCCAATGAAGCAGAATCCTGCT TACAAGGGCAAGTGGCATGCACCTATGATTGACAACCCCAACTACAAGGGAATCTGGAAG CCTCAGGAGATCCCCAACCCTGAGTACTTTGAGCTTGACAAGCCTGACTTTGATCCAATT GCTGCTATTGGGATTGAGATCTGGACAATGCAGGATGGCATCCTGTTTGACAATATCTTG ATTGCTGACGATGAGAAGGTTGCCACCTCCATTCTGGAGAAGACCTGGAAGCCCAAGTAT GATGTTGAGAAGGAAAAGGAGAAGGCTGAGGAGGAGGCTGCTGCTGGTGCAGATGGTCTT TCTGAGTTCCAGAAGAAGATTTTTGACGTCCTGTACAAGATTGCTGATGTTCCGTTCTTG GCACCCTACAAAACCAAGATCATTGATGTTATCGAGAAGGGAGAGAAGCAGCCCAACATC ACTATTGGCATTCTGGTCTCCGTTGTCGTCGTGTTCGTTACCGTTCTCTTCAAGATCCTG TTTGGAGGCAAGAAGCCGGTGGCACCTGTGAAACCTGCAGCTGAGGCGAAGAAGCCCAAG GCCACAGTGACCGACGGTGCTGGAAGCAGTGGCGACAAGGATGAGAAAGAGGACGAAAAG GAGGAGACAGCAGGCCCACGTCGGAGGACCCGAAGGGAGACATAG

Peptide Sequence

PEP ID	Zm00001d003857_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:63033369:63037024:-1 gene:Zm00001d003857 transcript:Zm00001d003857_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calnexin homolog1 description: calnexin homolog1
Sequence	MGGRALLLLLLVSALVFQIHASDPLLYEPFDEDFEGRWVVSKKDEYQGVWRHAKSDGHED YGLLVSEKARKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYIKYIRPQDAGWDA KEFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTA ILKPDNEVKILVDGEEKKKANFLSADDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPDA VKPDDWDEDAPMEIVDDEATKPEGWLDDEPEEIDDPEAAKPEDWDDEEDGEWEAPKIDNP KCEEAPGCGEWKRPMKQNPAYKGKWHAPMIDNPNYKGIWKPQEIPNPEYFELDKPDFDPI AAIGIEIWTMQDGILFDNILIADDEKVATSILEKTWKPKYDVEKEKEKAEEEAAAGADGL SEFQKKIFDVLYKIADVPFLAPYKTKIIDVIEKGEKQPNITIGILVSVVVVFVTVLFKIL FGGKKPVAPVKPAAEAKKPKATVTDGAGSSGDKDEKEDEKEETAGPRRRTRRET

Transcript Sequence

Transcript ID	Zm00001d003857_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:63033369:63037024:-1 gene:Zm00001d003857 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calnexin homolog1 description: calnexin homolog1
Sequence	CCACCGTTCCTTTTCCTCTCTCCTGATCTCAGCCGTGTAGCCTCTCCACCGCGCCCACTT CTTATACTGCCAGCGTCTGCTCCCTCTCGCGGAGGCCTCGCTCTGGTTGGAAGGTTTGGA GAAACTCCCCGGCTCGAGGAGATCGTGACATTGAGAGGACGATGGGAGGGCGCGCGCTCC TCCTCCTCCTCCTGGTCTCGGCGTTGGTCTTTCAGATCCACGCCTCCGACCCGCTGCTGT ACGAGCCGTTCGATGAGGACTTTGAGGGGAGATGGGTCGTCTCCAAGAAGGATGAATACC AAGGTGTGTGGAGGCATGCCAAGAGTGATGGTCATGAGGACTATGGCCTCCTTGTTAGTG AGAAGGCAAGGAAATACGCCATAATCAAGGAGCTTGATGAGCCAGTTACCTTGAAGGATG GGACAGTGGTCCTGCAGTTTGAAGTGAGACTTCAGAATGGCCTTGAATGCGGAGGTGCCT ACATTAAGTACATCCGCCCTCAGGATGCTGGATGGGATGCCAAGGAGTTTGATAATGAGA CTCCATACACTATTATGTTTGGTCCAGATAAGTGTGGATCAACCAACAAGGTTCATTTCA TCCTTAAGCACAAGAATCCTAAGACTGGAAAGTATGTTGAGCATCATCTCAAATTCCCAC CATCTGTCCCATATGACAAGCTCTCTCATGTCTACACGGCTATCTTGAAGCCAGACAATG AGGTCAAAATTTTGGTAGATGGGGAAGAAAAGAAGAAGGCGAACTTCCTTTCTGCTGATG ATTTTGAGCCAGCACTTATCCCATCCAAGACCATTCCTGACCCTGATGACAAGAAGCCGG AGGACTGGGATGAGAGAGCTAAAATTCCTGATCCAGATGCAGTAAAGCCTGATGACTGGG ATGAGGATGCCCCGATGGAAATTGTGGATGATGAAGCCACCAAGCCTGAGGGATGGTTGG ATGATGAACCTGAGGAGATTGATGATCCTGAGGCAGCCAAGCCTGAGGACTGGGACGATG AGGAGGATGGTGAATGGGAGGCGCCAAAGATTGACAACCCCAAGTGTGAAGAGGCACCTG GATGTGGCGAGTGGAAGAGGCCAATGAAGCAGAATCCTGCTTACAAGGGCAAGTGGCATG CACCTATGATTGACAACCCCAACTACAAGGGAATCTGGAAGCCTCAGGAGATCCCCAACC CTGAGTACTTTGAGCTTGACAAGCCTGACTTTGATCCAATTGCTGCTATTGGGATTGAGA TCTGGACAATGCAGGATGGCATCCTGTTTGACAATATCTTGATTGCTGACGATGAGAAGG TTGCCACCTCCATTCTGGAGAAGACCTGGAAGCCCAAGTATGATGTTGAGAAGGAAAAGG AGAAGGCTGAGGAGGAGGCTGCTGCTGGTGCAGATGGTCTTTCTGAGTTCCAGAAGAAGA TTTTTGACGTCCTGTACAAGATTGCTGATGTTCCGTTCTTGGCACCCTACAAAACCAAGA TCATTGATGTTATCGAGAAGGGAGAGAAGCAGCCCAACATCACTATTGGCATTCTGGTCT CCGTTGTCGTCGTGTTCGTTACCGTTCTCTTCAAGATCCTGTTTGGAGGCAAGAAGCCGG TGGCACCTGTGAAACCTGCAGCTGAGGCGAAGAAGCCCAAGGCCACAGTGACCGACGGTG CTGGAAGCAGTGGCGACAAGGATGAGAAAGAGGACGAAAAGGAGGAGACAGCAGGCCCAC GTCGGAGGACCCGAAGGGAGACATAGAGACCTATTTTTGATGTGTTTGGATGTTCTGGCG CCTGCTTATTTTGAGGACTCTTAATATTTCTGAGTGTATAATAGGAACTTGTGTCACCTC TGCGGCTTCCCTGCTGCTTATTTGTTTTTACATGGTTAGACCAGGAACCTTCACGAGCTG TAGAATTTAGTTCTTGTTGGTCATTTGTGTGTGTGCCTGACGGGTATAATCCCTTGTTCA ATCAGATAGAGGTGATGGTTTTTTTTCTCGTAGATCACAGGAAGGAATATTTCATAAAGT TCTCGTTAAATTCTGGACGCCTTTTGTTTTACACAATTCCTTGTATCATAGAATAGTCAG CGAGCGTATATTCTTACAACAGTTTTTGTCCTTCAATAGAAAAATTACAGTTTATTTATT ATGAATACAGTACATACAATTATAGTTTGGG