Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003813_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:60626185:60636179:-1 gene:Zm00001d003813 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	ATGAAGCCACATCGTCTCTGTATGACACATCACCTTGTTCTTTCATATGGACTTCATCAA AAGATGGAGATATATAGACCACACAAAGCATATCCAATAGAGCTTGCCCAATTCCATTCT GCTGATTATGTGGAATTCTTGCACCGGATAACTCCTGATTCCCAGCACCTATATGCAAGT GAACTAACTAGATACAATCTTGGAGAAGACTGTCCGGTCTTTGATAATTTGTTTGAGTTC TGCCAAATCTATGCGGGAGGAACTTTAGATGCTGCTCGCAGATTAAATCATAAAATATGT GACATTGCCATTAATTGGGCTGGTGGGCTACATCATGCCAAAAAGTGTGAGGCTTCAGGC TTCTGTTACATTAATGATCTAGTATTAGGAATTCTGGAGCTTCTCAAGTACCATGCCAGG GTTCTTTATATTGACATTGATGTCCATCATGGAGATGGAGTTGAAGAAGCCTTTTATTTC ACTGACAGGGTAATGACTGTGAGTTTCCACAAGTATGGTGACCTGTTCTTTCCTGGAACA GGTGATATTAAAGATATAGGAGAAAGGGAAGGAAAATATTATGCCATCAACATTCCACTT AAAGATGGGATAGATGACACTAGCTTTACTCGGCTTTTTAAAACAATTATTGCCAAAGTT GTTGAGACATATCTGCCTGGTGCTATTGTTCTTCAATGTGGGGCTGATTCATTGGCGAGG GATCGTTTAGGCTGCTTCAATCTCTCTATTGAAGGTCATGCTGAATGTGTAAAGTTTGTC AAGAAATTCAATATTCCCCTTCTGGTAACTGGAGGTGGTGGATACACCAAGGAGAATGTA GCACGGTGTTGGGCTGTTGAAACTGGGGTCCTTTTAGACACAGAACTCCCAAATGAGATT CCAAAAAATGAATATATTGAGTACTTTGCTCCAGATTATACATTGAAAGTTCCAAATTTG AACATGGACAATTTGAACAGTAAGACCTATCTCAGTTCAATCAAAGTGCAAGTGATGGAG AGTTTGCGGTACATACAGCATGCTCCTGGTGTTCAAATGCAAGAGGTTCCTCCCGATTTT TATATCCCGGACTTTGATGAAGATGAATTGGATCCTGATGAACGTGTTGACCAGCACACT CAAGACAAGCAGATTCACCGTGATGATGAGTACTATGAAGGTGACAATGACAACGATCAC GACGACGGCACACGCTAA

Peptide Sequence

PEP ID	Zm00001d003813_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:60626185:60636179:-1 gene:Zm00001d003813 transcript:Zm00001d003813_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	MKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIELAQFHSADYVEFLHRITPDSQHLYAS ELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWAGGLHHAKKCEASG FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGT GDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKTIIAKVVETYLPGAIVLQCGADSLAR DRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEI PKNEYIEYFAPDYTLKVPNLNMDNLNSKTYLSSIKVQVMESLRYIQHAPGVQMQEVPPDF YIPDFDEDELDPDERVDQHTQDKQIHRDDEYYEGDNDNDHDDGTR

Transcript Sequence

Transcript ID	Zm00001d003813_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:60626185:60636179:-1 gene:Zm00001d003813 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	GGAGATGTTGGCAATGTCTACTTTGGGCCAAATCACCCCATGAAGCCACATCGTCTCTGT ATGACACATCACCTTGTTCTTTCATATGGACTTCATCAAAAGATGGAGATATATAGACCA CACAAAGCATATCCAATAGAGCTTGCCCAATTCCATTCTGCTGATTATGTGGAATTCTTG CACCGGATAACTCCTGATTCCCAGCACCTATATGCAAGTGAACTAACTAGATACAATCTT GGAGAAGACTGTCCGGTCTTTGATAATTTGTTTGAGTTCTGCCAAATCTATGCGGGAGGA ACTTTAGATGCTGCTCGCAGATTAAATCATAAAATATGTGACATTGCCATTAATTGGGCT GGTGGGCTACATCATGCCAAAAAGTGTGAGGCTTCAGGCTTCTGTTACATTAATGATCTA GTATTAGGAATTCTGGAGCTTCTCAAGTACCATGCCAGGGTTCTTTATATTGACATTGAT GTCCATCATGGAGATGGAGTTGAAGAAGCCTTTTATTTCACTGACAGGGTAATGACTGTG AGTTTCCACAAGTATGGTGACCTGTTCTTTCCTGGAACAGGTGATATTAAAGATATAGGA GAAAGGGAAGGAAAATATTATGCCATCAACATTCCACTTAAAGATGGGATAGATGACACT AGCTTTACTCGGCTTTTTAAAACAATTATTGCCAAAGTTGTTGAGACATATCTGCCTGGT GCTATTGTTCTTCAATGTGGGGCTGATTCATTGGCGAGGGATCGTTTAGGCTGCTTCAAT CTCTCTATTGAAGGTCATGCTGAATGTGTAAAGTTTGTCAAGAAATTCAATATTCCCCTT CTGGTAACTGGAGGTGGTGGATACACCAAGGAGAATGTAGCACGGTGTTGGGCTGTTGAA ACTGGGGTCCTTTTAGACACAGAACTCCCAAATGAGATTCCAAAAAATGAATATATTGAG TACTTTGCTCCAGATTATACATTGAAAGTTCCAAATTTGAACATGGACAATTTGAACAGT AAGACCTATCTCAGTTCAATCAAAGTGCAAGTGATGGAGAGTTTGCGGTACATACAGCAT GCTCCTGGTGTTCAAATGCAAGAGGTTCCTCCCGATTTTTATATCCCGGACTTTGATGAA GATGAATTGGATCCTGATGAACGTGTTGACCAGCACACTCAAGACAAGCAGATTCACCGT GATGATGAGTACTATGAAGGTGACAATGACAACGATCACGACGACGGCACACGCTAATCT GCTTCTTCTGAGGCCCTGGTGTAAATGGAAACCTGAGATTCTTCACTGTTGTGTGTAGTT CAGCAGCCTTGAGATGTAATAGTTTGTCAGTTGACAGCAGGGATCTAATTTAGCAGGTCA AAGTGGTTTAGACTTTTATAAGGGATTCTGACCCCTCCTGAATTACACATTGTAGTACAA GTCTGCATATTTTTAAGCATGCAAAAATT