Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003750_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:57475947:57481107:-1 gene:Zm00001d003750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

ATGATGGGCAAGGAAGAGACGCCGCCGGCCGACGGAGGCGGCGCATTCGCCTTCATCTCC
AAGGGGTGGCGCGAGGTGCGGGACTCGGCGTCCGCTGACCTGCGCCTGATGCGCGCGCGC
GCGGACTCCGTGCGCGCGCGCGCCGACCGCGAGCTCGAGCACCTCCTCGCGTCCGCGGCG
TCGGCGCTCACGGGGCCCGCGCCCCCGCTGCCGCCCGTCGCGACGGGGGCGCCCATCGCG
GAGGTCGAGTTCGTGCGCAGGCGGATCCAGCCCAAGATCCAGGAGCTCCGGAGGCACTGC
TCGTCGCGGGCGCCCGACGCCCGGTGGCCGCCCGGGGCCGCCCCCGCCCCAGGCGCCAGC
AGCCTCCGCATCGACCTCTCGGGGATCACCGCCATTCGCAACGCCATTGTGGCGGAAGGG
GACCGCGGCGGTAGGTGGAGGGTCGCGCGGCGGAAGGGGGACCAGGACGAGGAGGGGAGG
AAGGAGTGGGAGGTGGTTCGGGTGATACAGAGCGGCCTCAAGGAGTTCGAGCGCCGGAGC
CTGTCCAGCGGCATATTTGCTGGATTCCGTGGCCGTGGCGAGTTTGTGGAGAAATTTAGG
TTCGGCATGAAATCACTGAACAAGGGCTATCAGGAATCCAAGGATGTTCCACCACTGCAT
CTAACTGAAATTGTGGCATATCTGGTTCGGCAATCTGGGCCATTTTTAGATCAACTTGGC
ATACAGAGAGACCTTTGTGACAAACTAGTGGAGATGTTATGCAGTAAACGAAATGGTCGG
CTCATGTATCATTCTCTTTCAAAGGACAGACCCTTAGCTGAGAACATATCTGACGAGCTT
GATCTAAGAATAGCTAGGGTATTAGAAAGTACTGGTTATCACACAGATGAAGGTTTTTGG
AATGACCCTGCAAAGTACAAGATCTCAGACAACAGACGGCATGTTGCTATTGTCACCACA
GCAAGCCTTCCATGGATGACAGGAACAGCAATCAATCCATTGTTTCGTGCTGCATATCTG
GCAAGAAGTGCAAAGCAAAAGGTGACATTGGTGGTCCCATGGCTCTCTAAGTCAGATCAA
GAATTGGTTTACCCAAATAACATCACCTTCAGTTCGCCAGAAGAGCAAGAAACTTATATA
AGGAACTGGCTGCAGGAAAGAATAGGCTTTGAAGCAAACTTTAAGATATCCTTTTATCCT
GGCAAGTTCTCAAAAGAGCGCCGCAGCATTATTCCTGCTGGGGATACTTCACAGTTCATC
TCCTCAAAAGAAGCTGATATAGCGATTTTAGAAGAACCGGAGCATCTCAACTGGTATCAT
CATGGGAAGCGTTGGACTGATAAGTTCAATCATGTCATCGGTGTAGTTCATACAAATTAC
TTGGAATATATCAAGAGAGAGAAAAATGGTGCTATTCAGTCTTTTCTTGTTAAACATATC
AATAACTGGGTGACTAGAGCATACTGCCATAAGGTTTTACGTCTTTCTGCTGCAACTCAA
GATCTACCGAGGTCTGTTGTTTGTAACGTACATGGTGTAAATCCGAAGTTTCTTAATGTT
GGTGAGAAAATAGCAGCTGATAGGGAGTGTGGACAGAAGGTCTTTTCTAAGGGAGCATAT
TTCCTTGGTAAGATGGTGTGGGCTAAAGGATATAGAGAGCTGATTGATTTATTATCCAAA
CACAAAAACGACCTGGAAGGATTCATGATAGATGTATATGGAAATGGCGAGGACTCTGAA
GCTGTCCAGAACGCTGCTAGGAAATTTGATTTGAACATCAATTTTTTCAAGGGAAAGGAC
CATGCAGATGATTCACTCCATGGGTACAAGGTTTTTGTCAATCCAAGTGTTAGTGATGTG
CTATGCACAGCAACAGCTGAGGCCCTTGCAATGGGGAAATTTGTAGTCTGTGCAGATCAT
CCATCAAACGATTTTTTTAAGTCATTCCCTAACTGCTTAACATATAGAACTTCAGCCGAA
TTTGTTGCTCGTGTCAAAGAAGCCATGGCTACTGAACCTCAACCTCTGACCTCAGAGCAA
CGGTACAGTTTGTCATGGGAAGCGGCGACTGAGAGGTTTATGGAATACTCAGAGCTTGAC
AAAGTTCTGAACAGAAATGGTCACCCTGGACGAAATGGGAAGGTTAACAAAGCAAGAAAG
ATACCGTTACTTCCTAAATTGTCAGATGTGGTGGATGGGGGACTGGCATTTGCTCATCAC
TGCCTGACTGGTAACGAAATCCTCAGATTAGCGACGGGAGCAATTCCTGGTACACGTGAC
TATGATAAACAGCAGTGCATGGATCTGAACCTGCTGCCTCCTCAAGTTCAACACCCTGTA
TATGGCTGGTGA

Peptide Sequence

PEP ID

Zm00001d003750_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:57475947:57481107:-1 gene:Zm00001d003750 transcript:Zm00001d003750_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

MMGKEETPPADGGGAFAFISKGWREVRDSASADLRLMRARADSVRARADRELEHLLASAA
SALTGPAPPLPPVATGAPIAEVEFVRRRIQPKIQELRRHCSSRAPDARWPPGAAPAPGAS
SLRIDLSGITAIRNAIVAEGDRGGRWRVARRKGDQDEEGRKEWEVVRVIQSGLKEFERRS
LSSGIFAGFRGRGEFVEKFRFGMKSLNKGYQESKDVPPLHLTEIVAYLVRQSGPFLDQLG
IQRDLCDKLVEMLCSKRNGRLMYHSLSKDRPLAENISDELDLRIARVLESTGYHTDEGFW
NDPAKYKISDNRRHVAIVTTASLPWMTGTAINPLFRAAYLARSAKQKVTLVVPWLSKSDQ
ELVYPNNITFSSPEEQETYIRNWLQERIGFEANFKISFYPGKFSKERRSIIPAGDTSQFI
SSKEADIAILEEPEHLNWYHHGKRWTDKFNHVIGVVHTNYLEYIKREKNGAIQSFLVKHI
NNWVTRAYCHKVLRLSAATQDLPRSVVCNVHGVNPKFLNVGEKIAADRECGQKVFSKGAY
FLGKMVWAKGYRELIDLLSKHKNDLEGFMIDVYGNGEDSEAVQNAARKFDLNINFFKGKD
HADDSLHGYKVFVNPSVSDVLCTATAEALAMGKFVVCADHPSNDFFKSFPNCLTYRTSAE
FVARVKEAMATEPQPLTSEQRYSLSWEAATERFMEYSELDKVLNRNGHPGRNGKVNKARK
IPLLPKLSDVVDGGLAFAHHCLTGNEILRLATGAIPGTRDYDKQQCMDLNLLPPQVQHPV
YGW

Transcript Sequence

Transcript ID

Zm00001d003750_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:57475947:57481107:-1 gene:Zm00001d003750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

TCGCGCCTCAACTTTCCCACGCGCGACTCGCACCTCCTACGCGCTTCTAGAACCAACGAA
GCATTTGACACCCAGCTCAGCCCTCGCGCTCGCGCAAGCGCGGCAAGCCCGCCCTCCACC
GGATAATAGTAATGATGGGCAAGGAAGAGACGCCGCCGGCCGACGGAGGCGGCGCATTCG
CCTTCATCTCCAAGGGGTGGCGCGAGGTGCGGGACTCGGCGTCCGCTGACCTGCGCCTGA
TGCGCGCGCGCGCGGACTCCGTGCGCGCGCGCGCCGACCGCGAGCTCGAGCACCTCCTCG
CGTCCGCGGCGTCGGCGCTCACGGGGCCCGCGCCCCCGCTGCCGCCCGTCGCGACGGGGG
CGCCCATCGCGGAGGTCGAGTTCGTGCGCAGGCGGATCCAGCCCAAGATCCAGGAGCTCC
GGAGGCACTGCTCGTCGCGGGCGCCCGACGCCCGGTGGCCGCCCGGGGCCGCCCCCGCCC
CAGGCGCCAGCAGCCTCCGCATCGACCTCTCGGGGATCACCGCCATTCGCAACGCCATTG
TGGCGGAAGGGGACCGCGGCGGTAGGTGGAGGGTCGCGCGGCGGAAGGGGGACCAGGACG
AGGAGGGGAGGAAGGAGTGGGAGGTGGTTCGGGTGATACAGAGCGGCCTCAAGGAGTTCG
AGCGCCGGAGCCTGTCCAGCGGCATATTTGCTGGATTCCGTGGCCGTGGCGAGTTTGTGG
AGAAATTTAGGTTCGGCATGAAATCACTGAACAAGGGCTATCAGGAATCCAAGGATGTTC
CACCACTGCATCTAACTGAAATTGTGGCATATCTGGTTCGGCAATCTGGGCCATTTTTAG
ATCAACTTGGCATACAGAGAGACCTTTGTGACAAACTAGTGGAGATGTTATGCAGTAAAC
GAAATGGTCGGCTCATGTATCATTCTCTTTCAAAGGACAGACCCTTAGCTGAGAACATAT
CTGACGAGCTTGATCTAAGAATAGCTAGGGTATTAGAAAGTACTGGTTATCACACAGATG
AAGGTTTTTGGAATGACCCTGCAAAGTACAAGATCTCAGACAACAGACGGCATGTTGCTA
TTGTCACCACAGCAAGCCTTCCATGGATGACAGGAACAGCAATCAATCCATTGTTTCGTG
CTGCATATCTGGCAAGAAGTGCAAAGCAAAAGGTGACATTGGTGGTCCCATGGCTCTCTA
AGTCAGATCAAGAATTGGTTTACCCAAATAACATCACCTTCAGTTCGCCAGAAGAGCAAG
AAACTTATATAAGGAACTGGCTGCAGGAAAGAATAGGCTTTGAAGCAAACTTTAAGATAT
CCTTTTATCCTGGCAAGTTCTCAAAAGAGCGCCGCAGCATTATTCCTGCTGGGGATACTT
CACAGTTCATCTCCTCAAAAGAAGCTGATATAGCGATTTTAGAAGAACCGGAGCATCTCA
ACTGGTATCATCATGGGAAGCGTTGGACTGATAAGTTCAATCATGTCATCGGTGTAGTTC
ATACAAATTACTTGGAATATATCAAGAGAGAGAAAAATGGTGCTATTCAGTCTTTTCTTG
TTAAACATATCAATAACTGGGTGACTAGAGCATACTGCCATAAGGTTTTACGTCTTTCTG
CTGCAACTCAAGATCTACCGAGGTCTGTTGTTTGTAACGTACATGGTGTAAATCCGAAGT
TTCTTAATGTTGGTGAGAAAATAGCAGCTGATAGGGAGTGTGGACAGAAGGTCTTTTCTA
AGGGAGCATATTTCCTTGGTAAGATGGTGTGGGCTAAAGGATATAGAGAGCTGATTGATT
TATTATCCAAACACAAAAACGACCTGGAAGGATTCATGATAGATGTATATGGAAATGGCG
AGGACTCTGAAGCTGTCCAGAACGCTGCTAGGAAATTTGATTTGAACATCAATTTTTTCA
AGGGAAAGGACCATGCAGATGATTCACTCCATGGGTACAAGGTTTTTGTCAATCCAAGTG
TTAGTGATGTGCTATGCACAGCAACAGCTGAGGCCCTTGCAATGGGGAAATTTGTAGTCT
GTGCAGATCATCCATCAAACGATTTTTTTAAGTCATTCCCTAACTGCTTAACATATAGAA
CTTCAGCCGAATTTGTTGCTCGTGTCAAAGAAGCCATGGCTACTGAACCTCAACCTCTGA
CCTCAGAGCAACGGTACAGTTTGTCATGGGAAGCGGCGACTGAGAGGTTTATGGAATACT
CAGAGCTTGACAAAGTTCTGAACAGAAATGGTCACCCTGGACGAAATGGGAAGGTTAACA
AAGCAAGAAAGATACCGTTACTTCCTAAATTGTCAGATGTGGTGGATGGGGGACTGGCAT
TTGCTCATCACTGCCTGACTGGTAACGAAATCCTCAGATTAGCGACGGGAGCAATTCCTG
GTACACGTGACTATGATAAACAGCAGTGCATGGATCTGAACCTGCTGCCTCCTCAAGTTC
AACACCCTGTATATGGCTGGTGATCAAACCAGTTCACATTGAACTATGTATAGTCGTAGG
ATGTACATATTAAGTGATCCAGTTCCTGTGTACTGACAGGAGCATGAACTTTTGTAGAGT
CTTGGTAATTCCTAGGGTCCATCGGGAACCTGCCTTGTTGCACTCTTTGATTGTAATTAT
ACTCCTTTTCGCTATCCAAATAGGTTAGTTATGTAGTTGAATGATCTTTAATCTGAGGTA
TGCGTATACACATAATTACCAGTGCCTGTACTCTGAAGTCTTATGGGACAGCAAGGATTG
TGACTTGTTTCGGTTTCCTCTGCCATGCCCCATAGTTTGTTCGGAAAACTGTCTGTAGGT
GTGAAAAGGGATAGAGTTTAACTTGCTGTGACTAGCTGAAGCAACCATACTCAAACTGAA
GACTCGGTGACGAGATAAATTAAGACATTATTGATTCGAGAAGTACTTTCATTTCCTTAC
TAACCTATGATGCAATGAAAAGTTGGAATTCTCTCGATCAAGGAAGTTGGGTCTTCTTTC
TATTATTTGGTATGTATCCTAACTACGGTCCTTAATCTTCAGATTTCCTGTGGCTCATGT
TACAATATTGTCTGTGTGGTTGAGGGACCCTGGCACATTTATCTTTGCTACATTTAGT