Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003742_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:2:56996010:56999379:1 gene:Zm00001d003742 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase type 2A regulator/ signal transducer

Sequence

ATGCCAAGTTCTGAACCAGACAGTGATGATGTTTTCTTTGACGCATTTGAAGATGTTCGA
TCTGCAGGGGAACCTTCATGTTCAGAGGATTGCAGCACCAGCGATGAAGTTTCAGTGGTG
AAATTTGAGTATGAGATTTGGGCAAACGAGCCGATGAGCGTTCAAGAAAGGCGGCAAAGG
TTCCTCAAGGGAATGGGATTCGATGATTTCGTGTCTAGTAGAACAGATTCTTTTCAATGC
CATGGTGAAATCACAGCCGTTGAGTCTTCCACTGGCATGGAGGTGAGAACGGCCAGTTGC
CATTCTTCCGTGGATTCATCTGTTTGTGACAATGAATCGGAGTTTGACGGTGCCTGTTGC
ATAAGGGATATGGATAGTAGAAAGAGAGATATTGTCAAGGGTGGACATAGCAGTATAACT
GACATGCTCAAGGAGGTTGGATCAGATAAGGTGATGTCTCTTCTGGAGTTCCAGAGTTTG
CCTGGCCTCTCTCGGGCTGTTCAAAATTTAGTTCGGAGGGGGTGTGGTAAAAGTCCTGCA
AAAGAAACGAAAAGTGCTAAGAAAATGGATGCCAAAAGCTTGTGGAAGAAATTCATGATA
AAGAGAAGCTTTGGTAGCGTGTGCAAGTATGATGTCCATGTGAAAAACTGCACAAATAGT
ATACCAACCAGAACAAGAGTTCAACATCGGAAGAAAAATTTCCTTGAATTCTCTGCTGTC
TACATGGATCAAGAAATCAGAGCTCACAAGGGTTCAATTCGGGTCATGAAATTCAGCCCA
TCTGGCTGGTATTTAGCAAGTGGTGGTGAGGATTGTGTTGTACGGATATGGCAAATCATA
CAAGTAGAAGCATCTCCTAAGTTGTATAGGGGAGAGGACCCCTATGAAAAAGTGGAGAAA
GTTCAGGTCTTTAAGACAAGTATAGAAAAGGGGCAGAACCAGGCACTTGCAGTTATACCC
AATAAGGTTTTTCGTATATCAGAGACTCCATTACATGAATTCCGTGGCCATACAAGTGAT
ATCCTTGATCTGGCATGGTCCAAATCAGATTATCTCTTAACTTCATCCAAAGATAAGACA
GTGCGCTTATGGAAACCCGGCTGTGATGGTTGTCTTGCAGTTTTCAAACACAAAGACTAT
GTAACATGTGTTCAGTTCAACCCTATTGATGAGAAATACTTCATCAGCGGTTCAGTAGAT
GGTAAAGTGCGCATTTGGGACGTGTTGGACAAGCGAGTAACTGACTGGGCCGATACGCGA
AATATCATAACTGATTTGAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACGATT
GCAGGCACATGTCGTTTCTATGATCAATCAGGTGAAAGCATCCAGCTAGAGAAAGAATTG
TTTGTGCAAGGGAAGAAAAAGTCAGCTGCCTGTCGGATCAACAGCCTAAAGCTATGTGCA
ATTGGTTCCAACAGGGTTATAATCACATCAGGAGATTCCAAAATCCGAGTTGCCAATGGT
GATACCATCCAAAAGTTTGAAGGGCCTTGGAAGTCGAAGGCTCTGTCATTACCGTCTCTA
ACATCAGACGAGAGATACCTCATATCGGCCGGCAAAGATTCCAACGTCTACATCTGGGAC
TTGGCCAACTCGAGAGACGACGCAAAGCCAGTCCACTCGTGCGAGCTGTTCTTCTCCAAG
GACGTGACGACCGCAGTGCCATGGCCGGGAGTGCGGCAACAAGACGGGCACGCGAGCGCG
AAACCTGCCTGTGTGGCCGAGAAATCCGCCAGCGCGCCCATCCTGCGCCAGTCGGCCCCC
GGGCCGTGGCCGTTCGTGGACGGCGGCGGCAGCAGCAGCAAGGGGTCGGCGACGTGGCCC
GAGGAGAAGCTCCTTTCTGCAGCGAAGCCTGTGGAAAGCAGCCCGCGGCTGGACGACTGC
CTCTCCATGCTATCCGCCGCGTGGAGCACGGTCATCGTGACCGCCGGCCGCGATGGCGTC
ATCCGGTCTTTTCCCAACTACGGCTTGCCCGTCAGGCTGTGA

Peptide Sequence

PEP ID

Zm00001d003742_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:2:56996010:56999379:1 gene:Zm00001d003742 transcript:Zm00001d003742_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase type 2A regulator/ signal transducer

Sequence

MPSSEPDSDDVFFDAFEDVRSAGEPSCSEDCSTSDEVSVVKFEYEIWANEPMSVQERRQR
FLKGMGFDDFVSSRTDSFQCHGEITAVESSTGMEVRTASCHSSVDSSVCDNESEFDGACC
IRDMDSRKRDIVKGGHSSITDMLKEVGSDKVMSLLEFQSLPGLSRAVQNLVRRGCGKSPA
KETKSAKKMDAKSLWKKFMIKRSFGSVCKYDVHVKNCTNSIPTRTRVQHRKKNFLEFSAV
YMDQEIRAHKGSIRVMKFSPSGWYLASGGEDCVVRIWQIIQVEASPKLYRGEDPYEKVEK
VQVFKTSIEKGQNQALAVIPNKVFRISETPLHEFRGHTSDILDLAWSKSDYLLTSSKDKT
VRLWKPGCDGCLAVFKHKDYVTCVQFNPIDEKYFISGSVDGKVRIWDVLDKRVTDWADTR
NIITDLSYQPDGKGFIVGTIAGTCRFYDQSGESIQLEKELFVQGKKKSAACRINSLKLCA
IGSNRVIITSGDSKIRVANGDTIQKFEGPWKSKALSLPSLTSDERYLISAGKDSNVYIWD
LANSRDDAKPVHSCELFFSKDVTTAVPWPGVRQQDGHASAKPACVAEKSASAPILRQSAP
GPWPFVDGGGSSSKGSATWPEEKLLSAAKPVESSPRLDDCLSMLSAAWSTVIVTAGRDGV
IRSFPNYGLPVRL

Transcript Sequence

Transcript ID

Zm00001d003742_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:56996010:56999379:1 gene:Zm00001d003742 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein phosphatase type 2A regulator/ signal transducer

Sequence

GCAGATAACAGTCTGATACCCCCCCACCCACTGCCTTCACTGACTGCTAGAGCCCCTCCT
TGTCAGTACAGTGTTTGGTGCTGAATCAAATCCACTGAAGATGCCAAGTTCTGAACCAGA
CAGTGATGATGTTTTCTTTGACGCATTTGAAGATGTTCGATCTGCAGGGGAACCTTCATG
TTCAGAGGATTGCAGCACCAGCGATGAAGTTTCAGTGGTGAAATTTGAGTATGAGATTTG
GGCAAACGAGCCGATGAGCGTTCAAGAAAGGCGGCAAAGGTTCCTCAAGGGAATGGGATT
CGATGATTTCGTGTCTAGTAGAACAGATTCTTTTCAATGCCATGGTGAAATCACAGCCGT
TGAGTCTTCCACTGGCATGGAGGTGAGAACGGCCAGTTGCCATTCTTCCGTGGATTCATC
TGTTTGTGACAATGAATCGGAGTTTGACGGTGCCTGTTGCATAAGGGATATGGATAGTAG
AAAGAGAGATATTGTCAAGGGTGGACATAGCAGTATAACTGACATGCTCAAGGAGGTTGG
ATCAGATAAGGTGATGTCTCTTCTGGAGTTCCAGAGTTTGCCTGGCCTCTCTCGGGCTGT
TCAAAATTTAGTTCGGAGGGGGTGTGGTAAAAGTCCTGCAAAAGAAACGAAAAGTGCTAA
GAAAATGGATGCCAAAAGCTTGTGGAAGAAATTCATGATAAAGAGAAGCTTTGGTAGCGT
GTGCAAGTATGATGTCCATGTGAAAAACTGCACAAATAGTATACCAACCAGAACAAGAGT
TCAACATCGGAAGAAAAATTTCCTTGAATTCTCTGCTGTCTACATGGATCAAGAAATCAG
AGCTCACAAGGGTTCAATTCGGGTCATGAAATTCAGCCCATCTGGCTGGTATTTAGCAAG
TGGTGGTGAGGATTGTGTTGTACGGATATGGCAAATCATACAAGTAGAAGCATCTCCTAA
GTTGTATAGGGGAGAGGACCCCTATGAAAAAGTGGAGAAAGTTCAGGTCTTTAAGACAAG
TATAGAAAAGGGGCAGAACCAGGCACTTGCAGTTATACCCAATAAGGTTTTTCGTATATC
AGAGACTCCATTACATGAATTCCGTGGCCATACAAGTGATATCCTTGATCTGGCATGGTC
CAAATCAGATTATCTCTTAACTTCATCCAAAGATAAGACAGTGCGCTTATGGAAACCCGG
CTGTGATGGTTGTCTTGCAGTTTTCAAACACAAAGACTATGTAACATGTGTTCAGTTCAA
CCCTATTGATGAGAAATACTTCATCAGCGGTTCAGTAGATGGTAAAGTGCGCATTTGGGA
CGTGTTGGACAAGCGAGTAACTGACTGGGCCGATACGCGAAATATCATAACTGATTTGAG
TTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACGATTGCAGGCACATGTCGTTTCTA
TGATCAATCAGGTGAAAGCATCCAGCTAGAGAAAGAATTGTTTGTGCAAGGGAAGAAAAA
GTCAGCTGCCTGTCGGATCAACAGCCTAAAGCTATGTGCAATTGGTTCCAACAGGGTTAT
AATCACATCAGGAGATTCCAAAATCCGAGTTGCCAATGGTGATACCATCCAAAAGTTTGA
AGGGCCTTGGAAGTCGAAGGCTCTGTCATTACCGTCTCTAACATCAGACGAGAGATACCT
CATATCGGCCGGCAAAGATTCCAACGTCTACATCTGGGACTTGGCCAACTCGAGAGACGA
CGCAAAGCCAGTCCACTCGTGCGAGCTGTTCTTCTCCAAGGACGTGACGACCGCAGTGCC
ATGGCCGGGAGTGCGGCAACAAGACGGGCACGCGAGCGCGAAACCTGCCTGTGTGGCCGA
GAAATCCGCCAGCGCGCCCATCCTGCGCCAGTCGGCCCCCGGGCCGTGGCCGTTCGTGGA
CGGCGGCGGCAGCAGCAGCAAGGGGTCGGCGACGTGGCCCGAGGAGAAGCTCCTTTCTGC
AGCGAAGCCTGTGGAAAGCAGCCCGCGGCTGGACGACTGCCTCTCCATGCTATCCGCCGC
GTGGAGCACGGTCATCGTGACCGCCGGCCGCGATGGCGTCATCCGGTCTTTTCCCAACTA
CGGCTTGCCCGTCAGGCTGTGAGCTCCGTCACCGGTCTGGGCTGCTGGTCAGTGGAGGCG
CAGCAGCCGTGGTTGGCGACTGATGATAGATAACCTGCTAACGTCTTGAAGTTTTTTTTT
CTCTCTCTCGTTTTTCTGGGCGGAGTTACTAGAAATTCTTTTTTATGTAAGCATTTGTTA
GATCATGAACCTTGTCATGAAGAGATGATCTGTAGTAGTCAGTTCAAGTCCAAACACTTG
TGCTCTGTGTGTGTGTGTTTTTTTTGCTGGATGGTTGTGACAAGGTAAAAAAACGCAAGC
ATTCAGTTAGATGTGACCAG