Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003702_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:55231147:55233488:-1 gene:Zm00001d003702 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 1
Sequence	ATGCCCTCACCTTCCTCCCTCCATCACTTCTCGCCAAGGCTCCCGCTCGCCTCTACAAAT GGCAAGGCCACGCCCTTCCACTTCCACCAATTCACTACCAACGACGTACAAGCCACCACC AACCAGCAGGAGCTCATCCGGATGGGCGACGCGGCTATTGCCGTCGTGCATGAGGCTGAT GAGGAGGAGCAGGAGCACATCTTCCGGAGCCGGTTCCCGCCTGTGGACCTGCCGGACGAC GTCACTGTGCCGGAGTTCGTACTGGCCGGCGCCGAGGCCTACGCGGACAAGGTGGCGCTC GTGGAGGCCGCGCCGGGGGGGCGGTCCTACACCTACGGCGAGGTGGCCCGGGACGTGGCG CGGTTCGCCAGGGCGCTGCGGTCCGTGGGCGTCCGCAAGGGCCACGTAGTGGTGGTCGCG CTCCCGAACCTCGCGGTGTACCCCGTGGTGAGCCTTGGGATCATGTCCGCAGGCGCGGTC TTCTCTGGTGTGAACCCGCGCGCCATCGCCGCGGAGATCAAGAAGCAGGTGGAAGACTCG GATGCCAAGCTCGTGGTCACCAACGAGGTTGCCTACGACAAGGTGAAGGACGCGGGCGTG CCGGTGATCGGCATCGGGGACGACATGGAGCGCCTCCCCGGTGCGATCAGCTGGGACGAG CTCCTCGCCGCCGCGGACCGCACGGGCGCGCCGGTGGTGGCGCTGGACCCGGTGCAGCAG TCCGACCTGTGCGCACTCCCCTACTCGTCCGGCACGACGGGGGTGTCCAAGGGCGTGATG CTGAGCCACCGGAACCTGGTCTCCAACCTCTGCTCGTCTATGTTCGCGGTCGGGGAGGAG CTGGTCGGTCAGGTCGTCACGCTGGGGCTCATGCCTTTCTTCCACATCTACGGCATCACC GGCATCTGCTGCTCCACGCTGCGGCACAAGGGCACTGTGGTGGTGATGGACCGCTTCGAC CTGCGCACCTTCCTGGGCGCGCTGGTGACGCACCGCGTGATGTTCGCGCCGGTGGTGCCG CCCGTGATGCTGGCCATGGTGAAGAGCCCCGTGGCCGACGATTTCGACCTCTCCGGCCTC GCCCTCAGGTCCATCATGACGGCTGCCGCGCCCCTCGCGCCGGACCTCCTCGCGGCCTTC GAGAAGAAGTTCCCGGGCGTGCAGGTGGAGGAGGCGTACGGGCTCACGGAGCACAGCTGC ATCACGCTGACGCACGCCGCGTCCGGCGACGACGCGCGGCAGGGGCCCGTCCAGGTCGCC AAGAAGAACTCGGTTGGGTTCATCCTGCCCAACCTGGAGGTGAAGTTCGTCGACCCCGAC ACGGGCCGGTCGCTGCCCAAGAACACGCCCGGCGAGATCTGCGTCCGGAGTCAGGCCGTG ATGCAGGGCTACTACAGGAAGAAGGAGGAGACGGAGCGCACCATCGATGCCAAGGGGTGG CTCCATACCGGCGACGTCGGCTACATCGACGACGACGGCGACGTGTTCATCGTCGACCGG ATCAAGGAGCTCATCAAGTACAAGGGCTTCCAGGTCGCTCCTGCCGAGCTGGAGGCCATT CTCCTGTCCCACCCGTCGGTCCAAGATGCGGCCGTCTTCGGCCTGCCGGACGAGGAGGCT GGCGAGGTCCCGGTGTCGTGCGTGGTGCGGCGGTGTGGCGCGTCGGAGAGCGAAGCGGAC ATCATGGCGTACGTGGCGGGCCGCGTGGCGTCGTACAAGAAGCTCCGGCTGCTGCAGTTC GTGGACGTCATCCACAAGTCGGTGTCAGGCAAGATCCTGCGGCGGCAGCTCCGGGACGAG TTCGTTAGCAGGACCAAAACGGCGGCAGCCTAG

Peptide Sequence

PEP ID	Zm00001d003702_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:55231147:55233488:-1 gene:Zm00001d003702 transcript:Zm00001d003702_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 1
Sequence	MPSPSSLHHFSPRLPLASTNGKATPFHFHQFTTNDVQATTNQQELIRMGDAAIAVVHEAD EEEQEHIFRSRFPPVDLPDDVTVPEFVLAGAEAYADKVALVEAAPGGRSYTYGEVARDVA RFARALRSVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRAIAAEIKKQVEDS DAKLVVTNEVAYDKVKDAGVPVIGIGDDMERLPGAISWDELLAAADRTGAPVVALDPVQQ SDLCALPYSSGTTGVSKGVMLSHRNLVSNLCSSMFAVGEELVGQVVTLGLMPFFHIYGIT GICCSTLRHKGTVVVMDRFDLRTFLGALVTHRVMFAPVVPPVMLAMVKSPVADDFDLSGL ALRSIMTAAAPLAPDLLAAFEKKFPGVQVEEAYGLTEHSCITLTHAASGDDARQGPVQVA KKNSVGFILPNLEVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRKKEETERTIDAKGW LHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVQDAAVFGLPDEEA GEVPVSCVVRRCGASESEADIMAYVAGRVASYKKLRLLQFVDVIHKSVSGKILRRQLRDE FVSRTKTAAA

Transcript Sequence

Transcript ID	Zm00001d003702_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:55231147:55233488:-1 gene:Zm00001d003702 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 1
Sequence	CTACAAAATCAGGGGCAATTAAGGACGTTATAACAGCCAAGCCGAACTCTTTTGTGAGCT CAAAGGCCATGACCCAACAACCAAACATCACCTGCACACCACTTGTCTTGACACACCACA CACAAGAATTGTATCACCGCTGCCAGCATGCCCTCACCTTCCTCCCTCCATCACTTCTCG CCAAGGCTCCCGCTCGCCTCTACAAATGGCAAGGCCACGCCCTTCCACTTCCACCAATTC ACTACCAACGACGTACAAGCCACCACCAACCAGCAGGAGCTCATCCGGATGGGCGACGCG GCTATTGCCGTCGTGCATGAGGCTGATGAGGAGGAGCAGGAGCACATCTTCCGGAGCCGG TTCCCGCCTGTGGACCTGCCGGACGACGTCACTGTGCCGGAGTTCGTACTGGCCGGCGCC GAGGCCTACGCGGACAAGGTGGCGCTCGTGGAGGCCGCGCCGGGGGGGCGGTCCTACACC TACGGCGAGGTGGCCCGGGACGTGGCGCGGTTCGCCAGGGCGCTGCGGTCCGTGGGCGTC CGCAAGGGCCACGTAGTGGTGGTCGCGCTCCCGAACCTCGCGGTGTACCCCGTGGTGAGC CTTGGGATCATGTCCGCAGGCGCGGTCTTCTCTGGTGTGAACCCGCGCGCCATCGCCGCG GAGATCAAGAAGCAGGTGGAAGACTCGGATGCCAAGCTCGTGGTCACCAACGAGGTTGCC TACGACAAGGTGAAGGACGCGGGCGTGCCGGTGATCGGCATCGGGGACGACATGGAGCGC CTCCCCGGTGCGATCAGCTGGGACGAGCTCCTCGCCGCCGCGGACCGCACGGGCGCGCCG GTGGTGGCGCTGGACCCGGTGCAGCAGTCCGACCTGTGCGCACTCCCCTACTCGTCCGGC ACGACGGGGGTGTCCAAGGGCGTGATGCTGAGCCACCGGAACCTGGTCTCCAACCTCTGC TCGTCTATGTTCGCGGTCGGGGAGGAGCTGGTCGGTCAGGTCGTCACGCTGGGGCTCATG CCTTTCTTCCACATCTACGGCATCACCGGCATCTGCTGCTCCACGCTGCGGCACAAGGGC ACTGTGGTGGTGATGGACCGCTTCGACCTGCGCACCTTCCTGGGCGCGCTGGTGACGCAC CGCGTGATGTTCGCGCCGGTGGTGCCGCCCGTGATGCTGGCCATGGTGAAGAGCCCCGTG GCCGACGATTTCGACCTCTCCGGCCTCGCCCTCAGGTCCATCATGACGGCTGCCGCGCCC CTCGCGCCGGACCTCCTCGCGGCCTTCGAGAAGAAGTTCCCGGGCGTGCAGGTGGAGGAG GCGTACGGGCTCACGGAGCACAGCTGCATCACGCTGACGCACGCCGCGTCCGGCGACGAC GCGCGGCAGGGGCCCGTCCAGGTCGCCAAGAAGAACTCGGTTGGGTTCATCCTGCCCAAC CTGGAGGTGAAGTTCGTCGACCCCGACACGGGCCGGTCGCTGCCCAAGAACACGCCCGGC GAGATCTGCGTCCGGAGTCAGGCCGTGATGCAGGGCTACTACAGGAAGAAGGAGGAGACG GAGCGCACCATCGATGCCAAGGGGTGGCTCCATACCGGCGACGTCGGCTACATCGACGAC GACGGCGACGTGTTCATCGTCGACCGGATCAAGGAGCTCATCAAGTACAAGGGCTTCCAG GTCGCTCCTGCCGAGCTGGAGGCCATTCTCCTGTCCCACCCGTCGGTCCAAGATGCGGCC GTCTTCGGCCTGCCGGACGAGGAGGCTGGCGAGGTCCCGGTGTCGTGCGTGGTGCGGCGG TGTGGCGCGTCGGAGAGCGAAGCGGACATCATGGCGTACGTGGCGGGCCGCGTGGCGTCG TACAAGAAGCTCCGGCTGCTGCAGTTCGTGGACGTCATCCACAAGTCGGTGTCAGGCAAG ATCCTGCGGCGGCAGCTCCGGGACGAGTTCGTTAGCAGGACCAAAACGGCGGCAGCCTAG CTCTAGCGAGAGCTAGACAGTCCAATATGCCAGTTACATACTTACATTGCACACGTACAT CAAACGAATAAATGTCAAGCTATTCTAAATTTTAATACTACTGCAATGGTGATGCTCAAT TATGCATGTTTATGTTTTTTTTCATGTACAAACTTAGCCCTTGAATCGGTTTTTTAAGTA TAAAAAAATAACCAAGAGACCGTGTGATACAACCTTTAGTTCCTTGATCATAATATAGTT AAGAGCCATTATGTATAAAGGGTCG