Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003679_T030
CDS Infomation

cds chromosome:B73_RefGen_v4:2:53861126:53867710:-1 gene:Zm00001d003679 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene102 description:Histone-lysine N-methyltransferase ASHH1
Sequence

ATGCCTATATCATTTACCTCAATGCTGATGAGTCAATTGATGCAACAAGAAAAGGGAACC
TTGCGAGATTCATCAACCATTCATGCATACAGCCAACCGAATTGTGAGACAAGGAAATGG
AATGTCCTTGGGGAAGTAAGAGTTGGAATTTTTGCTAAGCAAAACATTCCTTTTGGCACG
GAATTATCCTATGACTACAATTTTGAGTGGTATGGTGGTGTGATGGTGCGGTGCCTCTGT
GGAGCCGCCAGCTGTTCTGGGTTTCTTGGGGCTAAATCACGTGGTTTCCAGGAGGCCACG
TACCTGTGGGAAGATGATGATGACAGGTTTTCTGTTGAGAATATCCCTCTTTACGATTCT
GCTGATGACGAACCTACAAGCATTAACAAGGAAATCCTCGTATCAAGTGATGGCATGGTT
ACCCAATACAGCAACATCAGCAGAGTACAGAGTACCGAAAATCCTGGAAACACTGGAACA
AATGAATTTGCGCCAATTATCGTCGACGAACTGACAAGCTCAAATGGATTAGCACCAATG
AACGTTGAACCATTGACTGTAAGCTCAAATGAGTTCACGCCATCGAACGCCATGCCAATG
GTAGCTCGTCTAGTCGAGAATGGGTCAACTGGATACAGCGCACAGGACACTCACGACGCT
TCTCAGAATTCAGCGCCCAAAGCTGCAAATCACGCGAACCAAACTGGACCTCAGAACAAC
AGCAACCATTCAGCGTTGGTCCCTGTGAAGCCCGCGCCGAAACGCCGTGGCAGGAAACCG
AAACGCGTTGTGCACAAGCAGCTGGACATCCCAGATATCTGCGACCGGCTTACATCGTCT
GTGGCGTGCGAAGAAATACTGTACTGTGAGGTAATGGTCTGCTATGACTATGATCAGAAC
TCCCTTCTCTTAAAACAGTGTAGTAGTGGCGAACAATGTGAAGTTTAA

Peptide Sequence

PEP ID

Zm00001d003679_P030
PEP Infomation

pep chromosome:B73_RefGen_v4:2:53861126:53867710:-1 gene:Zm00001d003679 transcript:Zm00001d003679_T030 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene102 description:Histone-lysine N-methyltransferase ASHH1
Sequence

MPISFTSMLMSQLMQQEKGTLRDSSTIHAYSQPNCETRKWNVLGEVRVGIFAKQNIPFGT
ELSYDYNFEWYGGVMVRCLCGAASCSGFLGAKSRGFQEATYLWEDDDDRFSVENIPLYDS
ADDEPTSINKEILVSSDGMVTQYSNISRVQSTENPGNTGTNEFAPIIVDELTSSNGLAPM
NVEPLTVSSNEFTPSNAMPMVARLVENGSTGYSAQDTHDASQNSAPKAANHANQTGPQNN
SNHSALVPVKPAPKRRGRKPKRVVHKQLDIPDICDRLTSSVACEEILYCEVMVCYDYDQN
SLLLKQCSSGEQCEV

Transcript Sequence

Transcript ID

Zm00001d003679_T030
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:53861126:53867710:-1 gene:Zm00001d003679 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene102 description:Histone-lysine N-methyltransferase ASHH1
Sequence

GGTTCATTCATCCGTCGCCTCAAAATTCTAATTTCACCCCGAATCTTTATTTTTTTCAGG
CCGTCTTGTTACTGTCTGCTGTTCCACAGTCGACGAATCACGAATGCTAATGGAGGAAGA
ATGCGTAGAGGCACCGTCGTACATCCACATTGACAGCAACGCTTTCTCCTACAGAAAGCA
TAAGAGTCAGACAGAGGAGGACATAGCTGTGTGTGAGTGCCAGTATGATATCTTGGATCC
AGAGAGTCCATGTGGAGACCGGTGTTTAAATTTATTGACTAACACAGAATGCACGCCTGG
CTATTGCCGTTGTGGTGTGTACTGCAAGAATCAGCGGTTCCAAAAATGTCAATATGCCAG
GACAAGACTTGTAAGAACTGGAGGGCGTGGATGGGGCCTTGTGGCTGATGAGAATATTAT
GGCTGGTCAATTTGTTATCGAATATTGTGGAGAAGTAATATCATGGAAGGAAGCCAAACG
GAGAGCTCAAGCTTATGAAACCCAGTGTTTAAAGGATGCCTATATCATTTACCTCAATGC
TGATGAGTCAATTGATGCAACAAGAAAAGGGAACCTTGCGAGATTCATCAACCATTCATG
CATACAGCCAACCGAATTGTGAGACAAGGAAATGGAATGTCCTTGGGGAAGTAAGAGTTG
GAATTTTTGCTAAGCAAAACATTCCTTTTGGCACGGAATTATCCTATGACTACAATTTTG
AGTGGTATGGTGGTGTGATGGTGCGGTGCCTCTGTGGAGCCGCCAGCTGTTCTGGGTTTC
TTGGGGCTAAATCACGTGGTTTCCAGGAGGCCACGTACCTGTGGGAAGATGATGATGACA
GGTTTTCTGTTGAGAATATCCCTCTTTACGATTCTGCTGATGACGAACCTACAAGCATTA
ACAAGGAAATCCTCGTATCAAGTGATGGCATGGTTACCCAATACAGCAACATCAGCAGAG
TACAGAGTACCGAAAATCCTGGAAACACTGGAACAAATGAATTTGCGCCAATTATCGTCG
ACGAACTGACAAGCTCAAATGGATTAGCACCAATGAACGTTGAACCATTGACTGTAAGCT
CAAATGAGTTCACGCCATCGAACGCCATGCCAATGGTAGCTCGTCTAGTCGAGAATGGGT
CAACTGGATACAGCGCACAGGACACTCACGACGCTTCTCAGAATTCAGCGCCCAAAGCTG
CAAATCACGCGAACCAAACTGGACCTCAGAACAACAGCAACCATTCAGCGTTGGTCCCTG
TGAAGCCCGCGCCGAAACGCCGTGGCAGGAAACCGAAACGCGTTGTGCACAAGCAGCTGG
ACATCCCAGATATCTGCGACCGGCTTACATCGTCTGTGGCGTGCGAAGAAATACTGTACT
GTGAGGTAATGGTCTGCTATGACTATGATCAGAACTCCCTTCTCTTAAAACAGTGTAGTA
GTGGCGAACAATGTGAAGTTTAAGACGCATGCACCATGTAATGATCCATCTGATCTCGCC
AGGAAGTGAAGAACCAGGCCGTTTCTGAAATCGATGCCCTGTACGACGAGATAAGGCCTG
CGGTTGAAGAGCACGAGAGGGACAGCCAAGATAGCGTCTCCACAAGCCTCGCGGAGAAGT
GGATCGAGGCTAGCTGCCGCAAGTACAAGGCCGAATTCGACCTGTATGCTGCAGTACTCA
AGAACGTTGCCTCCACTCCACTACGGTCGAAAGATGATGTGGGCCCAAGAGAGCAGAACG
GGTTGAAGTACCTGGAGAACGGCTCATGATTTTTTTTAGCTAGAAGCGTGGAATATTACG
TACGCCTTCAATTTGTAGTATAGGGATTGCATTTTTTTTTAACTGTGGTTGGTCTTGTAT
TTAGGTAGAGGCATTGTAAGGTTACATGATTTTAAATAGCGTGGAATCATGT