Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003655_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:2:52483999:52537738:1 gene:Zm00001d003655 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH7 chloroplastic
Sequence

ATGATTGAATCTGAACTTGGAGGTTCTTGCAATATAGTTTGCACACAGCCCCGGCGGATA
GCGGCTATTTCTGTGGCCGAAAGAGTATCTGATGAAAGGTGTGAACCATCACCTGGATCG
AATGATTCACTGGTCGGATACCAAGTTCGTCTCGACAGTGCACGGAATGAGAGGACAAAG
CTTTTGTTCTGTACTACTGGTATCCTTCTCAGAAAGTTATCTGGAAACAGAGACTTAAGT
GATGTTACCCATGTTGTTGTGGATGAAGTACATGAACGTACAATTTTGAGTGACTTCCTG
CTTATTGTTCTTAAGAATCTTGTTGAGAAACGCTCCAATCAACAAGGAAGGAAGTTGAAA
GTGATTCTCATGTCTGCAACGGTTGATTCAAGCCTATTTGCACGATATTTTGGAGAATGC
CCCGTGATCAGTGTTGAAGGAAGAACACATCCAGTGTCAACTCATTTTCTTGAGGATGTT
TATGAGAAAATGGAGTACTGTCTTGCATTGGATTCTCCTGCATCAGGAGCTTACTTTGCG
CAGCATGGGGAAAAGTGGAAGCATGCTAGCAGCTCAGTGAACAACCGACGAGGAAAAAAG
AACCTTGTCTTATCCTCATGGGGTGATGAGTCAACGCTTTCCGAAGGCTATGTTAACCCT
CACTATATTTCTGATTACTATAGGTCATATAATGAGAGAACCAACCAAAATCTAAAACGC
TTGAATGAAGATGTCATCGATTTTGATCTATTGGAAGACTTGATATGCTATATTGATGAG
AACTGTCCTCAGGGTGCTATTCTTGTTTTTCTTCCTGGAGTTGCAGAGATTGACTTGTTG
ATTGATAGATTATCTGCTTTAGTTAGATTTGGAGGGGCATCATCTGATTGGATCCTTCCT
TTACATTCACTGCTTGGACCCTCTGATCAAAGGAAAGTGTTCCAGTCTCCACCAGATAAC
TTCCGCAAGGTTATTATTGCCACAGACATAGCAGAGACCAGCATTACAATTGATGATGTA
GTATATGTAGTTGATACTGGAAAGCACAAGGAGAACCGTTATAATCCACACAAGAAAATG
TCAAGCATAGTAGAAGATTGGATTTCTCGTGCAAATGCAAAACAGAGACGGGGTAGGGCT
GGTCGTGTGAAGCCTGGTTTATGTTTCTGTCTGTATACAAGGCATCGGTTTGAAAACGTC
ATGCGTCCATTTCAGGTGCCTGAGATGTTACGGATGCCTTTGACTGAGCTGTGCCTGCAA
ATAAAATCACTTCATCTTGATGACATCAAATCCTTCCTGCTAAAGGCAGTAGAGCCCCCT
AATGAAGAAGCTATTTCCTCTGCAGTTGACTTGTTATACAAGGTTGGAGCTTTTGAAGGA
CATGAAGAGTTGTCACCTCTTGGGTATCATCTGGCGAAACTGCCTGTTGATGTTTTGATT
GGAAAGATGATGCTTTATGGTGCTATCTTTGGTTGTTTATCACCAATTCTGTCCGTTGCT
GCTTTCCTGAGTTATAAATCTCCATTTCTCTCTCCAAAAGATGAGAAGCAAAATGTGGAG
AAAGCAAAAGCCACATTATTGAATGAGAACCTTGATGGATCTAGTTCTGTAACAGATAAT
AAACAATCCGATCACCTGCTAATGGTAATTGCATACGACAAATGGTCCCGCATACTGCTA
CAGAATGGTGATAAATCTGCTCGTCAGTTTTGCCATTCATTCTACTTGAATAGTACTGTG
ATGCACATGATCAGGGACATGCGTCTTCAGTTTGGTACCTTGTTAGCAGACATTGGACTT
ATAGATCTTCCTAAAGATACTCTGAGGCACAAGGTGGGCAGTAGAAAAAATAATCTCGAG
AGCTGGTTTTCTAATATGTCTCTTCCATTCAATGCCTATGCTCGCTGCACCTCGGTTATT
AAGTCGGTGATGTGTGCAGGTCTATACCCTAATGTGGCAGCATCTCTAGAGGGTGTTGAT
CCTGGAGCTCTAGGTGGAAGAAAGCCATCTGATGTTCTGTTCAGTAAGGACCGTCCTCGA
TGGTATGATGGAAGGCGAGAAGTTCATATACATCCATCATCTGTTAATCACAGCTTGAAA
GCTGTTCAATATCCATTTTTGGTGTTTCTTGAAAAGGTTGAGACAACCAAGGTGTTCTTA
CGTGATACTAGCGTCGTTTCCCCCTACTCACTTCTTTTGTTTGGTGGTTCCATGACAGGA
GTGGTTGTTATAGATGGATGGTTGAGGCTGTCTGCTGCTGCACAGACTGCTGTTTTATTC
AAGCAACTTCGGATGACTCTTGATGCTGTTCTAAAAGAACTGACAAGAAAACCAGAGATG
GCAACTTTTGTTGACAACGAAGTGGTCAGGTCCATCATTCATTTATTGTTAGAAGAAGAC
AAGGCTCGATAA

Peptide Sequence

PEP ID

Zm00001d003655_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:2:52483999:52537738:1 gene:Zm00001d003655 transcript:Zm00001d003655_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH7 chloroplastic
Sequence

MIESELGGSCNIVCTQPRRIAAISVAERVSDERCEPSPGSNDSLVGYQVRLDSARNERTK
LLFCTTGILLRKLSGNRDLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLK
VILMSATVDSSLFARYFGECPVISVEGRTHPVSTHFLEDVYEKMEYCLALDSPASGAYFA
QHGEKWKHASSSVNNRRGKKNLVLSSWGDESTLSEGYVNPHYISDYYRSYNERTNQNLKR
LNEDVIDFDLLEDLICYIDENCPQGAILVFLPGVAEIDLLIDRLSALVRFGGASSDWILP
LHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVVYVVDTGKHKENRYNPHKKM
SSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENVMRPFQVPEMLRMPLTELCLQ
IKSLHLDDIKSFLLKAVEPPNEEAISSAVDLLYKVGAFEGHEELSPLGYHLAKLPVDVLI
GKMMLYGAIFGCLSPILSVAAFLSYKSPFLSPKDEKQNVEKAKATLLNENLDGSSSVTDN
KQSDHLLMVIAYDKWSRILLQNGDKSARQFCHSFYLNSTVMHMIRDMRLQFGTLLADIGL
IDLPKDTLRHKVGSRKNNLESWFSNMSLPFNAYARCTSVIKSVMCAGLYPNVAASLEGVD
PGALGGRKPSDVLFSKDRPRWYDGRREVHIHPSSVNHSLKAVQYPFLVFLEKVETTKVFL
RDTSVVSPYSLLLFGGSMTGVVVIDGWLRLSAAAQTAVLFKQLRMTLDAVLKELTRKPEM
ATFVDNEVVRSIIHLLLEEDKAR

Transcript Sequence

Transcript ID

Zm00001d003655_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:52483999:52537738:1 gene:Zm00001d003655 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH7 chloroplastic
Sequence

GGAGAAACTGGATGTGGGAAAACAACTCAGGTGCCACAGTTTATTTTGGATGACATGATT
GAATCTGAACTTGGAGGTTCTTGCAATATAGTTTGCACACAGCCCCGGCGGATAGCGGCT
ATTTCTGTGGCCGAAAGAGTATCTGATGAAAGGTGTGAACCATCACCTGGATCGAATGAT
TCACTGGTCGGATACCAAGTTCGTCTCGACAGTGCACGGAATGAGAGGACAAAGCTTTTG
TTCTGTACTACTGGTATCCTTCTCAGAAAGTTATCTGGAAACAGAGACTTAAGTGATGTT
ACCCATGTTGTTGTGGATGAAGTACATGAACGTACAATTTTGAGTGACTTCCTGCTTATT
GTTCTTAAGAATCTTGTTGAGAAACGCTCCAATCAACAAGGAAGGAAGTTGAAAGTGATT
CTCATGTCTGCAACGGTTGATTCAAGCCTATTTGCACGATATTTTGGAGAATGCCCCGTG
ATCAGTGTTGAAGGAAGAACACATCCAGTGTCAACTCATTTTCTTGAGGATGTTTATGAG
AAAATGGAGTACTGTCTTGCATTGGATTCTCCTGCATCAGGAGCTTACTTTGCGCAGCAT
GGGGAAAAGTGGAAGCATGCTAGCAGCTCAGTGAACAACCGACGAGGAAAAAAGAACCTT
GTCTTATCCTCATGGGGTGATGAGTCAACGCTTTCCGAAGGCTATGTTAACCCTCACTAT
ATTTCTGATTACTATAGGTCATATAATGAGAGAACCAACCAAAATCTAAAACGCTTGAAT
GAAGATGTCATCGATTTTGATCTATTGGAAGACTTGATATGCTATATTGATGAGAACTGT
CCTCAGGGTGCTATTCTTGTTTTTCTTCCTGGAGTTGCAGAGATTGACTTGTTGATTGAT
AGATTATCTGCTTTAGTTAGATTTGGAGGGGCATCATCTGATTGGATCCTTCCTTTACAT
TCACTGCTTGGACCCTCTGATCAAAGGAAAGTGTTCCAGTCTCCACCAGATAACTTCCGC
AAGGTTATTATTGCCACAGACATAGCAGAGACCAGCATTACAATTGATGATGTAGTATAT
GTAGTTGATACTGGAAAGCACAAGGAGAACCGTTATAATCCACACAAGAAAATGTCAAGC
ATAGTAGAAGATTGGATTTCTCGTGCAAATGCAAAACAGAGACGGGGTAGGGCTGGTCGT
GTGAAGCCTGGTTTATGTTTCTGTCTGTATACAAGGCATCGGTTTGAAAACGTCATGCGT
CCATTTCAGGTGCCTGAGATGTTACGGATGCCTTTGACTGAGCTGTGCCTGCAAATAAAA
TCACTTCATCTTGATGACATCAAATCCTTCCTGCTAAAGGCAGTAGAGCCCCCTAATGAA
GAAGCTATTTCCTCTGCAGTTGACTTGTTATACAAGGTTGGAGCTTTTGAAGGACATGAA
GAGTTGTCACCTCTTGGGTATCATCTGGCGAAACTGCCTGTTGATGTTTTGATTGGAAAG
ATGATGCTTTATGGTGCTATCTTTGGTTGTTTATCACCAATTCTGTCCGTTGCTGCTTTC
CTGAGTTATAAATCTCCATTTCTCTCTCCAAAAGATGAGAAGCAAAATGTGGAGAAAGCA
AAAGCCACATTATTGAATGAGAACCTTGATGGATCTAGTTCTGTAACAGATAATAAACAA
TCCGATCACCTGCTAATGGTAATTGCATACGACAAATGGTCCCGCATACTGCTACAGAAT
GGTGATAAATCTGCTCGTCAGTTTTGCCATTCATTCTACTTGAATAGTACTGTGATGCAC
ATGATCAGGGACATGCGTCTTCAGTTTGGTACCTTGTTAGCAGACATTGGACTTATAGAT
CTTCCTAAAGATACTCTGAGGCACAAGGTGGGCAGTAGAAAAAATAATCTCGAGAGCTGG
TTTTCTAATATGTCTCTTCCATTCAATGCCTATGCTCGCTGCACCTCGGTTATTAAGTCG
GTGATGTGTGCAGGTCTATACCCTAATGTGGCAGCATCTCTAGAGGGTGTTGATCCTGGA
GCTCTAGGTGGAAGAAAGCCATCTGATGTTCTGTTCAGTAAGGACCGTCCTCGATGGTAT
GATGGAAGGCGAGAAGTTCATATACATCCATCATCTGTTAATCACAGCTTGAAAGCTGTT
CAATATCCATTTTTGGTGTTTCTTGAAAAGGTTGAGACAACCAAGGTGTTCTTACGTGAT
ACTAGCGTCGTTTCCCCCTACTCACTTCTTTTGTTTGGTGGTTCCATGACAGGAGTGGTT
GTTATAGATGGATGGTTGAGGCTGTCTGCTGCTGCACAGACTGCTGTTTTATTCAAGCAA
CTTCGGATGACTCTTGATGCTGTTCTAAAAGAACTGACAAGAAAACCAGAGATGGCAACT
TTTGTTGACAACGAAGTGGTCAGGTCCATCATTCATTTATTGTTAGAAGAAGACAAGGCT
CGATAAGCATGAATTCATGGCAATCCTATCGATACTAATTTTTTAGTAAAAACACTATCG
GTCCCTAAAATTTTTTAGTAAAAACACTGTCGGTCCCTAAACTTTTAAGTGTATCATCCG
GTTCCTACACTCCTAAAATGCACATCGAGCTTTCTTTGGTAGGGAAACTTGTATGATTGC
TCGTTTGAATCATTCTACTGCATATCACTAATAAAATATATTTTT