Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003648_T032
CDS Infomation	cds chromosome:B73_RefGen_v4:2:51944363:51949653:1 gene:Zm00001d003648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Increased DNA methylation 1
Sequence	ATGGGATCTAAAGAGGATTCTATTAACGACTATCATGATCCTTCAGTTGTCTCTGAGTTC CAAATTGCTAATAATGATGCAAAATGTGAACCTTCTATTGCATTCTTGCCAGAAAAGGAT AAAGATTTGGAAGCTAATAAAACGAGCTTGGAAGGTCCAGCAAAAACAGGCCAATTGTCA TCTGAAGCTAGTGGCAGCACTTTGATGATCTCAGAGCCACAAGTATTGTTTGTGTCCCCA CAAGATGGGACTCTGTCTTTCATGAACAATAATACGAACAACCAAGAGATGTGGAGGTTC CTGAATGTTTCCCCTGATACCATGGATACCGAAATGCAGATGGACTCTAATTCATTGGTT TACGAGGCAAGCTTGATTCAGGGTTTCTTGTACCTTGACAATGAGGGTTCTCCAATTTGT TGGACAGTGATGAACCCGGAACCTCCTAGGCGCTTGATATGTGCTACTGCTCTGGAACCA AACTCAAAGCTGTCGAAACAGTATGTTGAAATGAGGTTGGAGAATGATGCATCAACGTCT GAACACAAGAAGGGAGGAAAATTGTCTGATAAGGCTGCAGATATCCAAGACAATGTCAGT AGAAAAAAACAGAAAGCAAACATTGCTTCTTTAAATAATTGCGTAAGTATGGACAATTTA ACTGTCAATCCTATTGATCCTGTAGTTCTCAATGAGGGAGAGCAGACAGGTACAGCAATC ACTGAGCAGGTTCCTGTTCCTTTGAATCTAGTGCTTGAGAACAAAAATGACAAGGACCAA GGTGAGCAAAGCAGTGAAACTTCAGAACAACTTATGTCCAAAGAACCACAAAAAAGGGAC ATCAAAAGGCAAAAGAGAACATGGTCTCATACATGCAAGTTTGATGATGATGACCTTCTG ATGACAGCTGTAATATATAAGCTGACAGCACGTTACAGGAACTCTTTTCATCGGAAGCTC AGAAATAAATTCGGTTTCAGGCGTCTTCCAACATACCACTGGGAGAATGAAGATAAAGGT GACAGGAAGAAGTTTCCTGGAGAAGCAAGGACGGTGTTGAACAAGTTACTTGAAATGGGC ATTGTTGCTAGAGTGGATATTCTTCAATGTCATGGTCCAGGAGGCAAAAATGTGTTGAAG GATGGGAACATAACTGCGAGTGGCATTCAATGCCAGTGCTGTGGTACCACATTCACAATG TCCAAGTTTAAGTGTCATGCAGGTCTCAGGCAAGAAGTCCCATCTCTGAATCTTTTCTTG GATACAGGCAAATCTTACAGTCTTTGTCAGCTTCAAGCATGGTCTATAGAGCAGAAGGTG AGGAAAGAGCATGCAAAGGATACAATGTCCCTTCAAGCAGACCAAAACGATGATACCTGT GGATCATGTGGCGATGGTGGTGAACTGATATGCTGTGACAATTGTCCTGCTAGTTACCAT CAAGCCTGCTTGTCTTGCCAGTTTGCGCAAAGAAAGAGGGACTCCAAGAATGCCGGTGCT GCTGCCCGCCCACCCCCTCGTGGATCGAGCTTTTTAAACTTCCCATGGATATTCCAGATG GCAACTGGTACTGCTCTAGCTGCCTTTGCGACATTTGTGGTGAAGTAA

Peptide Sequence

PEP ID	Zm00001d003648_P032
PEP Infomation	pep chromosome:B73_RefGen_v4:2:51944363:51949653:1 gene:Zm00001d003648 transcript:Zm00001d003648_T032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Increased DNA methylation 1
Sequence	MGSKEDSINDYHDPSVVSEFQIANNDAKCEPSIAFLPEKDKDLEANKTSLEGPAKTGQLS SEASGSTLMISEPQVLFVSPQDGTLSFMNNNTNNQEMWRFLNVSPDTMDTEMQMDSNSLV YEASLIQGFLYLDNEGSPICWTVMNPEPPRRLICATALEPNSKLSKQYVEMRLENDASTS EHKKGGKLSDKAADIQDNVSRKKQKANIASLNNCVSMDNLTVNPIDPVVLNEGEQTGTAI TEQVPVPLNLVLENKNDKDQGEQSSETSEQLMSKEPQKRDIKRQKRTWSHTCKFDDDDLL MTAVIYKLTARYRNSFHRKLRNKFGFRRLPTYHWENEDKGDRKKFPGEARTVLNKLLEMG IVARVDILQCHGPGGKNVLKDGNITASGIQCQCCGTTFTMSKFKCHAGLRQEVPSLNLFL DTGKSYSLCQLQAWSIEQKVRKEHAKDTMSLQADQNDDTCGSCGDGGELICCDNCPASYH QACLSCQFAQRKRDSKNAGAAARPPPRGSSFLNFPWIFQMATGTALAAFATFVVK

Transcript Sequence

Transcript ID	Zm00001d003648_T032
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:51944363:51949653:1 gene:Zm00001d003648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Increased DNA methylation 1
Sequence	GATAATGATGGAAGTGGACCTTCTGGTGCATCATCACTACCACCAGAGAAAGATGCATAC ATGGGATCTAAAGAGGATTCTATTAACGACTATCATGATCCTTCAGTTGTCTCTGAGTTC CAAATTGCTAATAATGATGCAAAATGTGAACCTTCTATTGCATTCTTGCCAGAAAAGGAT AAAGATTTGGAAGCTAATAAAACGAGCTTGGAAGGTCCAGCAAAAACAGGCCAATTGTCA TCTGAAGCTAGTGGCAGCACTTTGATGATCTCAGAGCCACAAGTATTGTTTGTGTCCCCA CAAGATGGGACTCTGTCTTTCATGAACAATAATACGAACAACCAAGAGATGTGGAGGTTC CTGAATGTTTCCCCTGATACCATGGATACCGAAATGCAGATGGACTCTAATTCATTGGTT TACGAGGCAAGCTTGATTCAGGGTTTCTTGTACCTTGACAATGAGGGTTCTCCAATTTGT TGGACAGTGATGAACCCGGAACCTCCTAGGCGCTTGATATGTGCTACTGCTCTGGAACCA AACTCAAAGCTGTCGAAACAGTATGTTGAAATGAGGTTGGAGAATGATGCATCAACGTCT GAACACAAGAAGGGAGGAAAATTGTCTGATAAGGCTGCAGATATCCAAGACAATGTCAGT AGAAAAAAACAGAAAGCAAACATTGCTTCTTTAAATAATTGCGTAAGTATGGACAATTTA ACTGTCAATCCTATTGATCCTGTAGTTCTCAATGAGGGAGAGCAGACAGGTACAGCAATC ACTGAGCAGGTTCCTGTTCCTTTGAATCTAGTGCTTGAGAACAAAAATGACAAGGACCAA GGTGAGCAAAGCAGTGAAACTTCAGAACAACTTATGTCCAAAGAACCACAAAAAAGGGAC ATCAAAAGGCAAAAGAGAACATGGTCTCATACATGCAAGTTTGATGATGATGACCTTCTG ATGACAGCTGTAATATATAAGCTGACAGCACGTTACAGGAACTCTTTTCATCGGAAGCTC AGAAATAAATTCGGTTTCAGGCGTCTTCCAACATACCACTGGGAGAATGAAGATAAAGGT GACAGGAAGAAGTTTCCTGGAGAAGCAAGGACGGTGTTGAACAAGTTACTTGAAATGGGC ATTGTTGCTAGAGTGGATATTCTTCAATGTCATGGTCCAGGAGGCAAAAATGTGTTGAAG GATGGGAACATAACTGCGAGTGGCATTCAATGCCAGTGCTGTGGTACCACATTCACAATG TCCAAGTTTAAGTGTCATGCAGGTCTCAGGCAAGAAGTCCCATCTCTGAATCTTTTCTTG GATACAGGCAAATCTTACAGTCTTTGTCAGCTTCAAGCATGGTCTATAGAGCAGAAGGTG AGGAAAGAGCATGCAAAGGATACAATGTCCCTTCAAGCAGACCAAAACGATGATACCTGT GGATCATGTGGCGATGGTGGTGAACTGATATGCTGTGACAATTGTCCTGCTAGTTACCAT CAAGCCTGCTTGTCTTGCCAGTTTGCGCAAAGAAAGAGGGACTCCAAGAATGCCGGTGCT GCTGCCCGCCCACCCCCTCGTGGATCGAGCTTTTTAAACTTCCCATGGATATTCCAGATG GCAACTGGTACTGCTCTAGCTGCCTTTGCGACATTTGTGGTGAAGTAATCGATTCAAAGG AGCTTGTAACTTCCCTTCCTGCTTTAGATTGCTCACAGTGCGAACGCCAATACCATGTAA AATGTGTATCTGCCAAAGTTCCGTGCAATGAGGATGGATCTGGTACCTGGTTTTGTGGAA GAAAATGTCACGAGATCTATATGACCTTCCGTTCTCGTGTTGGAGTGCCTGATCACATGG ACGATGATCTGTGTTTCACCGTTCTTCGTAACAACGGTGATAAGAAGGTTCGCACGGCAG AGGAGATTGCTCTCATGGCTGAATGCAACATGAAACTCATGATCGCCACGAGTATCATGG AAGAGTGTTTCCTGCCTATTCTAGATCCCAGGACAGGGATAGACATTATTCCCTCCATAT TGTATAACTGGAGGTCTGATTTACATTTCAATTACAAGGGGTTCTATACAGTAGTCTTGG AAAGTGATGATAGCATGGTATCTGTTGCCTCCATAAGGTTGCATGGTGCAATTTTAGCAG AGATGCCTCTGGTAGCAACTTCTAAAGAGAATCGTCAGCAGGGGATGTGCAGGCGCCTCA TGGATTACATTGAGGAGATGCTGAAATCCCTGAAGGTGGAGATGCTGCTCCTATCAGCAA TCCCGCACCTGGCGGAGACATGGACATCGACATTTGGGTTCAGAGAGATAGATGAGTCGG ACAAGAAGAGGCTGAGTAAGGTGAGGCTGGCCGCAGTTCCGGGGACCGTCCTACTGAAGA AGGACCTGCTGTGTGAATGTTCAGGCGCGGACGCCGGTGAGCCGCCGAGCCCTAAGCCCT TCCAAGTTTACTCGCGCGTGCCGAGAGGCCGCACCGGTTTGGATGCAGTGTGCCAATAAA GATGACGCAGTGGATCGAATGCGCCGCGGTCAGTCGTCGTCGTCGGTGACAGGGGGCAGC TGGTGGTCGTCACGGGGCCTCGTCTCCGGTTGCTGAAGCCGAGGCCGAGCACATCAGCAC GCGCCGGTTTGTGTGGTGGAAATGGAAAGCCTCGTTGCTCTGGTAGGAGCTCTGAAGATC GCTGTCGTCTGCTTGTAGTCTGTAAATAGCTTCTCCGTCGGCGAGAAGCCCAGGGTCCAC GGCCATTGTAGAACCGAACCTGTATGATAAAACTAGACCGTGTTGGCGCCCCACCAGCGT TTAGTAGTTTCCGTTGCCCTTT