Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003632_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:51106489:51111751:-1 gene:Zm00001d003632 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:regulator of chromosome condensation2 description: regulator of chromosome condensation2
Sequence

ATGGACTCGGTCATGGCCGCCCCCGACTCGCCGCCGCAGACTGTCGTGCTCGTCTCTGCC
GGCGCCAGCCACTCCGTCGCGCTCCTCACGGGCAATGTCCTGTGCTCGTGGGGCAGGGGC
GAGGACGGGCAGCTCGGCCACGGCGACGCGGAGGACCGGCTCGTGCCCACGGTGCTTAGC
GGCTTCGACGCGCCCGCGATCACGTCCGTCATCTGCGGCGCCGACCACACCACCGCCTAC
TCCGAGGACGAGCTGCAGGTCTACAGCTGGGGCTGGGGAGACTTTGGGAGGCTGGGGCAC
GGCAACTCCAGCGACGTCTTCACGCCCCAGCCTGTCAAGGCGCTGCAGGGGCTCAAGATC
AAACAGATTGCCTGCGGGGACAGCCATTGTCTTGCCGTCACCATGGCCGGAGAAGTGCAG
AGTTGGGGCCGTAACCAAAACGGACAGCTAGGCCTTGGAACCACTGAAGACTCGCTGCTC
CCACAAAAGATTCAGGCTTTTGAGAGTGTTTGCGTGAAAATGATTGCTGCCGGTGCCGAA
CATACTGCTGCAGTAACTGAAGACGGTGACCTCTACGGATGGGGTTGGGGTCGATATGGA
AACTTAGGTCTTGGTGACCGTAATGACCGTTTGCTTCCTGAAAAAGTATCTTCTGTGGAG
GGTGAGAAGATGGTGCTTGTGGCATGTGGATGGCGCCATACAATTACGGTTTCTGACTCT
GGTAATCTGTACACTTATGGTTGGAGCAAATATGGTCAGCTAGGGCATGGTGATTTTGAA
GATCATTTAGTTCCACATAAAGTAGAAGCTTTGAAAGATAGCACTATATCCCAGATTTCA
GGCGGCTGGAGGCATACGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGG
AACAAGTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAGTC
AGTTTTCCAGAGGATCAGAAAATCTCCCAGGTTGCATGCGGATGGAGGCATACTCTGGCC
CTCTCCGAGAAGAAAAATGTCTTCTCCTGGGGGAGGGGCACTAGCGGACAGCTCGGCAAC
GGTGAAATAGTCGACAGGAACACGCCTGTGCTGATCGATGCCCTGAGCTCAGACGGTTCT
GCCTGCAAGAAGCTGGAGTCATCCACGGCAGCCCCATTCGCAGCCAAAGTTTGGGTGTCG
CCGTCAGAACGATACGCCATAGTCCCTGACGAGAACGTCCGTAAAGCAGGCGGAGGCACG
GCACGAGGCAACGGCGCCGACGCGAACGTGCCGGAGAACGACGTGAAGAGGATGCGCGTG
CAGTCGTCGTAG

Peptide Sequence

PEP ID

Zm00001d003632_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:51106489:51111751:-1 gene:Zm00001d003632 transcript:Zm00001d003632_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:regulator of chromosome condensation2 description: regulator of chromosome condensation2
Sequence

MDSVMAAPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLS
GFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKI
KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAE
HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDS
GNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGW
NKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGN
GEIVDRNTPVLIDALSSDGSACKKLESSTAAPFAAKVWVSPSERYAIVPDENVRKAGGGT
ARGNGADANVPENDVKRMRVQSS

Transcript Sequence

Transcript ID

Zm00001d003632_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:51106489:51111751:-1 gene:Zm00001d003632 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:regulator of chromosome condensation2 description: regulator of chromosome condensation2
Sequence

GAGCCGGGCCGAGCTGAATTAAAAACTCAGATAAGTTGGTGAAGGCGACGTTGCGCGCTC
TGGTCTCTTCGCTCCGGGAGCAAAACGAGTGGCCCTGCTGCGCTCCTCCTGCCGCCCCTC
CAGACGCCCGGACCCGTCCCGCCACCTACACAATGACAGCAGGCCCCGCAGAGACGCGGC
CCCGCGAGTAAGGGGAGCACTCTGGCCGCCGTCGACGTCGTCGTCGTCCACCTCTCCCCG
CTCCTCCTTAATGACGTGCTAATCAGCGAGCTTAACCCACTGGCTCGGGCGAGCGCCAGT
GCCTTTGCTAGCGCACAGGCACAGCGGCGCACGGCGCGGGCGGGGCGGCATTCGCGTGCG
TCTCGCCGTCTCGTCACATGGTGGTGAGGGTGGGCCGGTGGGGCTTGTACGCTAGCCATT
AATACGGCAGGTCGCCCATCCCATCCCATCGCGGCCGCCGCGCCCGCCGGTCTCCACCCC
TCCCCCCACCCCCTGCTTAAAATCCCGCGTCCCGGTCGCGCACCCCACTCCGCCTCCGCT
CCCCGCTCGCCGCCGCGATTGCTGGATTGGCTGCCGCCAGCGCCCCGGTGCTAGCTCCCG
TTCCTCGCGGTGGTCACTGGACTAGCCTGGACGCCGCGGCCCGCCGCCTGGTCGAAGAGA
TGGACTCGGTCATGGCCGCCCCCGACTCGCCGCCGCAGACTGTCGTGCTCGTCTCTGCCG
GCGCCAGCCACTCCGTCGCGCTCCTCACGGGCAATGTCCTGTGCTCGTGGGGCAGGGGCG
AGGACGGGCAGCTCGGCCACGGCGACGCGGAGGACCGGCTCGTGCCCACGGTGCTTAGCG
GCTTCGACGCGCCCGCGATCACGTCCGTCATCTGCGGCGCCGACCACACCACCGCCTACT
CCGAGGACGAGCTGCAGGTCTACAGCTGGGGCTGGGGAGACTTTGGGAGGCTGGGGCACG
GCAACTCCAGCGACGTCTTCACGCCCCAGCCTGTCAAGGCGCTGCAGGGGCTCAAGATCA
AACAGATTGCCTGCGGGGACAGCCATTGTCTTGCCGTCACCATGGCCGGAGAAGTGCAGA
GTTGGGGCCGTAACCAAAACGGACAGCTAGGCCTTGGAACCACTGAAGACTCGCTGCTCC
CACAAAAGATTCAGGCTTTTGAGAGTGTTTGCGTGAAAATGATTGCTGCCGGTGCCGAAC
ATACTGCTGCAGTAACTGAAGACGGTGACCTCTACGGATGGGGTTGGGGTCGATATGGAA
ACTTAGGTCTTGGTGACCGTAATGACCGTTTGCTTCCTGAAAAAGTATCTTCTGTGGAGG
GTGAGAAGATGGTGCTTGTGGCATGTGGATGGCGCCATACAATTACGGTTTCTGACTCTG
GTAATCTGTACACTTATGGTTGGAGCAAATATGGTCAGCTAGGGCATGGTGATTTTGAAG
ATCATTTAGTTCCACATAAAGTAGAAGCTTTGAAAGATAGCACTATATCCCAGATTTCAG
GCGGCTGGAGGCATACGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGA
ACAAGTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAGTCA
GTTTTCCAGAGGATCAGAAAATCTCCCAGGTTGCATGCGGATGGAGGCATACTCTGGCCC
TCTCCGAGAAGAAAAATGTCTTCTCCTGGGGGAGGGGCACTAGCGGACAGCTCGGCAACG
GTGAAATAGTCGACAGGAACACGCCTGTGCTGATCGATGCCCTGAGCTCAGACGGTTCTG
CCTGCAAGAAGCTGGAGTCATCCACGGCAGCCCCATTCGCAGCCAAAGTTTGGGTGTCGC
CGTCAGAACGATACGCCATAGTCCCTGACGAGAACGTCCGTAAAGCAGGCGGAGGCACGG
CACGAGGCAACGGCGCCGACGCGAACGTGCCGGAGAACGACGTGAAGAGGATGCGCGTGC
AGTCGTCGTAGTAGGTCTTCTACTACCGTCCACTCCACCACCCCCCCGTTAACCCTACTA
GTAGTAAGTACTACGAAGACGAACCGGTGCCCCATCTAGCGGCGCCCGATTTTTGTGCGT
TACGTTCTGCCTAAAAGTGCTTTCCGTCGACGGACGGACCTCCTGGTGTTGAGATGGTAG
CGGTAGCACTGCCTCGCGGCGATGGTGTGTGTCGTGACGTGATTCACCTCTTAGAGTAGA
GAGGTGGCTAGCCCAGTCGACCTGTGTTGTGTGTGTTGTTAAGATGTGTCCTGGATCTTT
TGTGACATTGCATGGAGGGTACAATAAGCGCTTCGTTTCTCGTTTCTTC