Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003618_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:50621259:50624060:1 gene:Zm00001d003618 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

ATGGATTTGGTCGTCGAAAGCGTCGTTCATGGGCGCTTACCCGTCAGGCCATCAAGGTTT
CCTCTTCTGCCCGGCTCGTTGCCCTCCACTACCGTGGCACTGAGTGCTGCCTTTTCCGGA
CGTCCATGCCCACCCATTGTTCGTCGGAATGCCCCAGCGGTGGTGCCATTTGCCAAGAAG
AAGAGGAATGAATATATCGAAGATCCGCCAGATGAGGAGGTCGCAGATGATTTCACCGAC
GAGATGGAGGAGGACTTCGACGACGCCAAAGAAGACGAAGGCGATGTAATGGATGATGAC
GAAGAGTATGAGGACGACTATGACTTTGAAGATGATTTTGAGAGTGATGATGAACAGGAT
CTTTATGCTGGAGATGGAGGTGCTGGTGGCGGTATATCCCTTGCTGGTGCATGGTGGGAC
AAGGAAGCGTTAGCTTTGGCAGAACAGGTCTCAGCATCATTCAACGACGACTTGAAAATA
TATGCTTTCAAGACAGCTGCAAATTTGACTATTAGAGTACGCATTGAGAAGATGTCCACC
AGGTATGGTTCTCCAACGATAGATGACATTGAAGCATACACAATTGCATATCGTGCAAAG
TTGGACGAAGCAGAGTCAGCAGGAAAGATACCGAAAAACATATCGTTGGAGGTGTCATCC
CCTGGTGTGGAGAGAGTTATCCGTATCCCTGAAGAGCTCGAACGATTCAAAGAAAGGGCA
ATGTATGTCAGATACACTACAGCAAGCGATGAGGCAACCACACCTCAGGAAGGTGACGGC
GTGCTAACGCTAATTTCCTATGACATGGACCTGCGAGAGTGCACCTGGGGCATAGCTGAT
GTGAAGATAAACCGGCAGCAGTCTGGCAAGGGCAGGCCCCTGAGCAAGAAGCAGAGGGAA
TGGAGGCTGCAGACACCGTTCGAGTCGCTGAAGTTGGTCAGGTTGTACTCTGAATGTTGA

Peptide Sequence

PEP ID

Zm00001d003618_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:50621259:50624060:1 gene:Zm00001d003618 transcript:Zm00001d003618_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

MDLVVESVVHGRLPVRPSRFPLLPGSLPSTTVALSAAFSGRPCPPIVRRNAPAVVPFAKK
KRNEYIEDPPDEEVADDFTDEMEEDFDDAKEDEGDVMDDDEEYEDDYDFEDDFESDDEQD
LYAGDGGAGGGISLAGAWWDKEALALAEQVSASFNDDLKIYAFKTAANLTIRVRIEKMST
RYGSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPGVERVIRIPEELERFKERA
MYVRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVKINRQQSGKGRPLSKKQRE
WRLQTPFESLKLVRLYSEC

Transcript Sequence

Transcript ID

Zm00001d003618_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:50621259:50624060:1 gene:Zm00001d003618 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

ATGGTGGCTCTGAAGTCATCTGTTAACCGATGGATTTGGTCGTCGAAAGCGTCGTTCATG
GGCGCTTACCCGTCAGGCCATCAAGGTTTCCTCTTCTGCCCGGCTCGTTGCCCTCCACTA
CCGTGGCACTGAGTGCTGCCTTTTCCGGACGTCCATGCCCACCCATTGTTCGTCGGAATG
CCCCAGCGGTGGTGCCATTTGCCAAGAAGAAGAGGAATGAATATATCGAAGATCCGCCAG
ATGAGGAGGTCGCAGATGATTTCACCGACGAGATGGAGGAGGACTTCGACGACGCCAAAG
AAGACGAAGGCGATGTAATGGATGATGACGAAGAGTATGAGGACGACTATGACTTTGAAG
ATGATTTTGAGAGTGATGATGAACAGGATCTTTATGCTGGAGATGGAGGTGCTGGTGGCG
GTATATCCCTTGCTGGTGCATGGTGGGACAAGGAAGCGTTAGCTTTGGCAGAACAGGTCT
CAGCATCATTCAACGACGACTTGAAAATATATGCTTTCAAGACAGCTGCAAATTTGACTA
TTAGAGTACGCATTGAGAAGATGTCCACCAGGTATGGTTCTCCAACGATAGATGACATTG
AAGCATACACAATTGCATATCGTGCAAAGTTGGACGAAGCAGAGTCAGCAGGAAAGATAC
CGAAAAACATATCGTTGGAGGTGTCATCCCCTGGTGTGGAGAGAGTTATCCGTATCCCTG
AAGAGCTCGAACGATTCAAAGAAAGGGCAATGTATGTCAGATACACTACAGCAAGCGATG
AGGCAACCACACCTCAGGAAGGTGACGGCGTGCTAACGCTAATTTCCTATGACATGGACC
TGCGAGAGTGCACCTGGGGCATAGCTGATGTGAAGATAAACCGGCAGCAGTCTGGCAAGG
GCAGGCCCCTGAGCAAGAAGCAGAGGGAATGGAGGCTGCAGACACCGTTCGAGTCGCTGA
AGTTGGTCAGGTTGTACTCTGAATGTTGAGATGCCAGTTTTTGAGTAAATTTTGAGTTTC
CATTTGTTGCACTCCTTCGGCAGTTTATCCAGTCTCGCTGAACTCTGATATGCCACTGGA
TGCGCAGCTCATACTAGGTAGAATGATGTTGTACTAATGTACTATCTGTCACAATCAATT
AGTTTTTTTTCATTGCTAACAGATAACAACAGAGGTTTAGCCACGCAAAGCAGAATGTTC
TTTGCTTCACCTTTACAGTTTACAGGCACTTGATTTATTGTTTGTATTCTCCTAGATGTT
TGTATAATCTGTTAGTGCATTGTATATTTTTTTAGAGTTTTATTAGGGCCAGGCCCCAGT
TGTATCATTAAGAAGACCTTGTTGCTTGCTCTATACGGGCCTGTTTGTTAGGGATCCGCT
GTTG