Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003616_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:2:50474582:50479129:-1 gene:Zm00001d003616 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 28
Sequence

ATGGTGGAGAGGGAAAGGGGCGAGGGAGAAGCCAGGGCCCTGGCCAGCGGGCCAGGGCAG
CAGCAGCAGCAGGAAGGAGCAGCGGAGGGCGAGAGGGTCGAGAAAGAAGGAGACGAGCGG
GAGGAGGAGGATCGAGACGACGAAGCCGTGGAGTGGTCCGAGATACGGCTCGCCATCGAG
GAGCTGTCCCCGGCGGCCCATCTCAAGCGCGTCGACGGCGATGGCAAGGCGGCCGCGTCG
TCCCTGCCCACGCTCCGCTTCCTGGCGCTGTCGCACCTCCTCGTTCGAGTGCTCGATAAG
ATCGGGCCGACCATGGCCGTGCTGAGGCTCGACGTCCAACGGAACATCGAGAGGCTGCAG
GAGCTGTACCTGCTGGACCCAGCCACGTACTCGACCCTGACGGGGATAGTGGAGAAGGAA
GTGAAGGAGGGCACAGCGAGGAAGGTCGACAGCTGCGCAAGGGCGATCCTGTGGCTTGCT
AGATCCATGGATTTCACAGCTGCGCTGTTACAGAGGCTGGAGGAGGACTCTACGCAGCAG
CAGCAGCAGAGCCTCGCGCAGCTCGTGGAGGCCGCGTACGAGGCCACCCTGAAGCCGTGG
CACGGCTGGATCTCCTCGGCGGCGTGCAAGGTTGGGGCGACCACGCCACCGCGAATCCTT
TTTTGTGGCCGCGCGGGTGCTGTGCTGTGCTGTGCTATGCTAGTTCTGAATGGTCTCCGC
TAA

Peptide Sequence

PEP ID

Zm00001d003616_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:2:50474582:50479129:-1 gene:Zm00001d003616 transcript:Zm00001d003616_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 28
Sequence

MVERERGEGEARALASGPGQQQQQEGAAEGERVEKEGDEREEEDRDDEAVEWSEIRLAIE
ELSPAAHLKRVDGDGKAAASSLPTLRFLALSHLLVRVLDKIGPTMAVLRLDVQRNIERLQ
ELYLLDPATYSTLTGIVEKEVKEGTARKVDSCARAILWLARSMDFTAALLQRLEEDSTQQ
QQQSLAQLVEAAYEATLKPWHGWISSAACKVGATTPPRILFCGRAGAVLCCAMLVLNGLR

Transcript Sequence

Transcript ID

Zm00001d003616_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:50474582:50479129:-1 gene:Zm00001d003616 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 28
Sequence

TAAGCATGAGCTCTGGGGACACAGATTCAGACATTGCAACGGTTTTATGGGTAGCCTGCC
TGAAGGGTCGCCACCTAATCCCTGCCGATCGGGGCAATGCTATTCTGGGAAATGCTATGC
TTGCACTTGTAATAACTGCCGCTTCTCTGACTGAGCTTCGTTTGCAGCTGCTGGACTTCA
ATCATGCCGCTTCTCTGTGATTGAGCTTCGCTTCCTTTTTGCTGCAGCTACTTTTCGTCG
TACAAGTGGTTACCAACAGCTGCAGTAGATTTGGTGGGTGTTTGGTTTCTAGGGACTAAT
GTTTAGTCCCATCATTTTATTCTATTTTAGTGTATAAATTGTCAAATATAGAAACTAAAA
TAAAGTTTTAGTTTCTATATTTGACAATTTTGTGACTTAAATAGAATAAAATGTAGGGAC
TAAATATTAGTCACTAGAAACCAAACACCCCCTTGGTGTGCCGCTGGCTGCTTTTTCTGA
CCCCCTCTACGAACAGTAGGTGTACATTACAAGCGGAAGGTGGCGTCACAGGACAGGAGA
AAGCAAGCACGGTCCAAGGCCGTTCTAGCTGTCGACGCCGCTTTGGATAAAAAAAAAAGA
GGTGACGCCACTGACGCGAGAGCGGGAGAAAAAGCCAGATTCATCTGCAGTGTCACTGAT
CCGGCGTCGACGCCGCCTCGTAGAGCAGGGAAATGACATGGGCTACGACTTATACGTCAC
TGCTTAAGTTCTCAGCAAAGAGCAGGGAGGATAAGCTTGGAATGCCTTGGCAGTGAGAGC
TGCAACTGCAACAAAGCAACCGGCGTCCATGGTGGAGAGGGAAAGGGGCGAGGGAGAAGC
CAGGGCCCTGGCCAGCGGGCCAGGGCAGCAGCAGCAGCAGGAAGGAGCAGCGGAGGGCGA
GAGGGTCGAGAAAGAAGGAGACGAGCGGGAGGAGGAGGATCGAGACGACGAAGCCGTGGA
GTGGTCCGAGATACGGCTCGCCATCGAGGAGCTGTCCCCGGCGGCCCATCTCAAGCGCGT
CGACGGCGATGGCAAGGCGGCCGCGTCGTCCCTGCCCACGCTCCGCTTCCTGGCGCTGTC
GCACCTCCTCGTTCGAGTGCTCGATAAGATCGGGCCGACCATGGCCGTGCTGAGGCTCGA
CGTCCAACGGAACATCGAGAGGCTGCAGGAGCTGTACCTGCTGGACCCAGCCACGTACTC
GACCCTGACGGGGATAGTGGAGAAGGAAGTGAAGGAGGGCACAGCGAGGAAGGTCGACAG
CTGCGCAAGGGCGATCCTGTGGCTTGCTAGATCCATGGATTTCACAGCTGCGCTGTTACA
GAGGCTGGAGGAGGACTCTACGCAGCAGCAGCAGCAGAGCCTCGCGCAGCTCGTGGAGGC
CGCGTACGAGGCCACCCTGAAGCCGTGGCACGGCTGGATCTCCTCGGCGGCGTGCAAGGT
TGGGGCGACCACGCCACCGCGAATCCTTTTTTGTGGCCGCGCGGGTGCTGTGCTGTGCTG
TGCTATGCTAGTTCTGAATGGTCTCCGCTAACTAACTTTGACCGATCGATCGATCGATTG
ATTTTTGATCCGGGCCGGGCGGGCGGCTTATAACGTTTTGCAGATAGCGTGGAAGCTCAT
CCCCGAGAGGAAGGTCTTCACCGGCATGCTGCTGGGGACGGGCCAGGACTGCTCTGCACT
TGAAGACGAGATCGGGCGGCTCGCGCTGTTGCTTCGGCCCTTCCTTGATGACATCCACTC
CATGATGGCCAAGTTCAGACTGGACAGGCTCAAGTCGACGTGATCCATGGCGAACCCGAC
GCAAGCCCAAGCCATGGACATGGACATGGTCCGATCCCCGTCCTTCGCTGTGAATACTGC
CTGCCCTGGCTTCCGTCTTCGAGTCGCATTTGCTTGCGGTTAGGTCTAGTTTAGACGCTG
CTGCTCTCTAGTCTGTACATAGGTCTTTTGCTTGTAGAATAGACTCCCAAGATCTGCATG
CGGTGCCCTTTTTTCGTGGTAGGCTACGTTTGGACAGCGCCCCTCCTCAATTGCCTCTGC
CTGTGCCAATACGTTGGCCGGCCAAACTTTGGCTGCCCAAGAAACGGCCAACTTTGGCAG
GGAAAATGAACTAGCAAGTTGTTCACGATGCCAAACTTTGGCAG