Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003614_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:50153897:50156317:1 gene:Zm00001d003614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase-like protein CCR4
Sequence	ATGTCTCCACCTCCACCTCGCCGCCACCTCCTGAGCCTCCTCGCTTTGGTCGCTTTCTTC CCACCGTTCCTCCTCGCCTCCTCCTCCTTCCCGCTTCCCACCATCGCCATAGCCGCCGTG AGCGCCAACACCAGCGCCTCCCCGCACAACCTCGCATGCGCGCTCGTCCCCTTCGGGAAC GGGACGGACTACATGATCTCCTGCGCCAGCGTCTCCAACCGCTCCGCCGAGCCCCACATC TACTCTTACGGCGGCGCCGGCGGTGGAAGCACGCCGTTCTCCGCCGTCGTCGCCGGAGAT GGGTACCTCTGCTCTGCCGGACCGACTGTTTCCCCGCCGATGGCCATGCGGTGGTGGGAC CTGACAGACAGCGAGGAGCCGTCCAAGCGGGTGTACTGGGGCAAGGCGCTGTCAGCGGTG TCCGGCGGCGGAGAGTACGTGTGCGGGCTCGTGGAGGAGAGGATACAGTGCTGGAGGTGG TCTTCGGGGACGTTTCCGCAGAGCCTGCGGTTCTCGGCCGTAGCGGCGGGCGGCGGGTTC GTGTGCGGGCTGGCGAAAGACTCCGGCGAGGTGAAGTGTTTCGGCGGCCGAGAAGCCGTG GGGCGAGAGCCGAAGGGGAGCCATGCCATGCTCGCCGCGGGAGAGCGGCACGCGTGCGCG GTGAAGGCGGGGAGCGGTGAGGTTGTGTGCTGGGGTGAGGCGGCGGCGGTGGCGGCCGCG TCGCCGACGGTAGCGGGGCGTTCGGTTTCGTCGCTGGCGGTGGGAGACGCGATCACGTGC GTGCTGTGGGGGAACTGGACGGTCGCGTGCTGGCCGCCGGAGGAGGCGGCGCCGCCGCAG CCGGTGGCGCAGCAGCAGTTTGTCGCGCTGGAGGCCAGGGGGAAGGTGGTCTGCGGGGTG CTCATGTCCGACTACTCCCTCGTGTGCTGGGGCCCCGGCGTGTCGGGCGGGGTGAGCAAA GTGTTCGACCGCGTGCTGCCGGGCCCTTGCGCGCCGTGGACGTCGTGCACGTGCGGCGTC TGGTCGGGCTCCGCGCCTCTCTGTGGCGGCGGCACGGGATACGCAGCCGTCTGCTACCCC TGCGGCTACAGTCCGCAGCTGATGGTGTTGACGCCCCCTACTTCGGACTCGTCGGCGAGC TCTCACTCGAGGTGGACGAAGCGGCGGCCGAGCGACCTGGCGATCGCGTTGATCAGTGCC GGGATCGGCTCGGGAGTGCTTGCCGCCATCGCCGCGGTGGTGGCGGTCTACTGCCTTCGC CGGCGACGGAGCGGCGCCTCTCAGGACCCTGGGCGCATCCACGCCGAGCCAATTGGTCCG GCGCCGCGCGTGGAGCGGCGGCTCAGCGCGCTGCTCTCCAAGGGCCCGAACACGACGGTG GAGCAGTTCCCGCTGGTGGCGCTCCGGGGCGCCACGGACGGCTTCTCCCCGTCCCACCGC ATCGGGTCCGGCAGCTTCGGCGTGGTGTACCGCGCGTGCCTCCCCGACGGCCGCGAGGTG GCCATCAAGCGCGCGGAGCGCCGCGGCCCCGTCGCGGAGTCCTCCTCCGTGGCCGCGCGG CGCGCCAACAACCACGAGGTGGCATTCGTCGCGGAGCTGACGCTCCTCTCCCGCGTGAAC CACAAGAACCTCGTCCGGCTCCTCGGCTTCTGCGCCGACGGCGGCGAGCGCATCCTCGTG TACGAGTACATGCCCAACGGCACCCTCCACGACCACCTCCACAAGCGGGCGGCGCCGCTC TCCCCGCCGCTGGCGTCGTGGCCGGCGCGCCTCCGCCTGGCGCTGGGCGCCGCGCGCGGC ATCGAGTACATGCACACCTACGCCGTGCCGCCCATCATCCACCGCGACATCAAGTCCCCC AACATCCTCCTCGACGACGCCTGGACCGCCAAGGTGTCCGACTTCGGGCTCTCGCTGCTC ATCAACGACCTGAGCAGCAGCGGCGGCGGCAACGGATGCAATGCCGCCGCCGCCGACGAC GAGCCGTGCATGACGGCCGGCACGGTGGGGTACATGGACCCGGAGTACTACCGGCTGCAG CACCTGACGGACAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGCTGCTCTCC GGGTGCAAGGTGATCCAGCGGTTCGAGGGCAGCGGCACGCCCAAGAACGTGGTGGACGTG ACCGTGCCGCACATCGAGGCGGACCGCGTGCACCGGGTGCTCGACGCGCGGCTCCCGCTT CCGACGCCGGCGGAGATGGAGGCCGTCGCCTACGTCGGGTACCTGGCCTCGGACTGCGTG CGGCCCGCGGGGCGCGACCGGCCCACCATGAGCGAGGTGGTCGGCGTGCTCGAGCGTGCC GTGGCGGCGTGCGAGGAGCACGACGATGGGGGCGGCGAGGCAGTGCTGTCGCGGTCGTGC ACCGATGGGTCCACTGCGTGA

Peptide Sequence

PEP ID	Zm00001d003614_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:50153897:50156317:1 gene:Zm00001d003614 transcript:Zm00001d003614_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase-like protein CCR4
Sequence	MSPPPPRRHLLSLLALVAFFPPFLLASSSFPLPTIAIAAVSANTSASPHNLACALVPFGN GTDYMISCASVSNRSAEPHIYSYGGAGGGSTPFSAVVAGDGYLCSAGPTVSPPMAMRWWD LTDSEEPSKRVYWGKALSAVSGGGEYVCGLVEERIQCWRWSSGTFPQSLRFSAVAAGGGF VCGLAKDSGEVKCFGGREAVGREPKGSHAMLAAGERHACAVKAGSGEVVCWGEAAAVAAA SPTVAGRSVSSLAVGDAITCVLWGNWTVACWPPEEAAPPQPVAQQQFVALEARGKVVCGV LMSDYSLVCWGPGVSGGVSKVFDRVLPGPCAPWTSCTCGVWSGSAPLCGGGTGYAAVCYP CGYSPQLMVLTPPTSDSSASSHSRWTKRRPSDLAIALISAGIGSGVLAAIAAVVAVYCLR RRRSGASQDPGRIHAEPIGPAPRVERRLSALLSKGPNTTVEQFPLVALRGATDGFSPSHR IGSGSFGVVYRACLPDGREVAIKRAERRGPVAESSSVAARRANNHEVAFVAELTLLSRVN HKNLVRLLGFCADGGERILVYEYMPNGTLHDHLHKRAAPLSPPLASWPARLRLALGAARG IEYMHTYAVPPIIHRDIKSPNILLDDAWTAKVSDFGLSLLINDLSSSGGGNGCNAAAADD EPCMTAGTVGYMDPEYYRLQHLTDKSDVYSFGVVLLELLSGCKVIQRFEGSGTPKNVVDV TVPHIEADRVHRVLDARLPLPTPAEMEAVAYVGYLASDCVRPAGRDRPTMSEVVGVLERA VAACEEHDDGGGEAVLSRSCTDGSTA

Transcript Sequence

Transcript ID	Zm00001d003614_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:50153897:50156317:1 gene:Zm00001d003614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase-like protein CCR4
Sequence	ATGTCTCCACCTCCACCTCGCCGCCACCTCCTGAGCCTCCTCGCTTTGGTCGCTTTCTTC CCACCGTTCCTCCTCGCCTCCTCCTCCTTCCCGCTTCCCACCATCGCCATAGCCGCCGTG AGCGCCAACACCAGCGCCTCCCCGCACAACCTCGCATGCGCGCTCGTCCCCTTCGGGAAC GGGACGGACTACATGATCTCCTGCGCCAGCGTCTCCAACCGCTCCGCCGAGCCCCACATC TACTCTTACGGCGGCGCCGGCGGTGGAAGCACGCCGTTCTCCGCCGTCGTCGCCGGAGAT GGGTACCTCTGCTCTGCCGGACCGACTGTTTCCCCGCCGATGGCCATGCGGTGGTGGGAC CTGACAGACAGCGAGGAGCCGTCCAAGCGGGTGTACTGGGGCAAGGCGCTGTCAGCGGTG TCCGGCGGCGGAGAGTACGTGTGCGGGCTCGTGGAGGAGAGGATACAGTGCTGGAGGTGG TCTTCGGGGACGTTTCCGCAGAGCCTGCGGTTCTCGGCCGTAGCGGCGGGCGGCGGGTTC GTGTGCGGGCTGGCGAAAGACTCCGGCGAGGTGAAGTGTTTCGGCGGCCGAGAAGCCGTG GGGCGAGAGCCGAAGGGGAGCCATGCCATGCTCGCCGCGGGAGAGCGGCACGCGTGCGCG GTGAAGGCGGGGAGCGGTGAGGTTGTGTGCTGGGGTGAGGCGGCGGCGGTGGCGGCCGCG TCGCCGACGGTAGCGGGGCGTTCGGTTTCGTCGCTGGCGGTGGGAGACGCGATCACGTGC GTGCTGTGGGGGAACTGGACGGTCGCGTGCTGGCCGCCGGAGGAGGCGGCGCCGCCGCAG CCGGTGGCGCAGCAGCAGTTTGTCGCGCTGGAGGCCAGGGGGAAGGTGGTCTGCGGGGTG CTCATGTCCGACTACTCCCTCGTGTGCTGGGGCCCCGGCGTGTCGGGCGGGGTGAGCAAA GTGTTCGACCGCGTGCTGCCGGGCCCTTGCGCGCCGTGGACGTCGTGCACGTGCGGCGTC TGGTCGGGCTCCGCGCCTCTCTGTGGCGGCGGCACGGGATACGCAGCCGTCTGCTACCCC TGCGGCTACAGTCCGCAGCTGATGGTGTTGACGCCCCCTACTTCGGACTCGTCGGCGAGC TCTCACTCGAGGTGGACGAAGCGGCGGCCGAGCGACCTGGCGATCGCGTTGATCAGTGCC GGGATCGGCTCGGGAGTGCTTGCCGCCATCGCCGCGGTGGTGGCGGTCTACTGCCTTCGC CGGCGACGGAGCGGCGCCTCTCAGGACCCTGGGCGCATCCACGCCGAGCCAATTGGTCCG GCGCCGCGCGTGGAGCGGCGGCTCAGCGCGCTGCTCTCCAAGGGCCCGAACACGACGGTG GAGCAGTTCCCGCTGGTGGCGCTCCGGGGCGCCACGGACGGCTTCTCCCCGTCCCACCGC ATCGGGTCCGGCAGCTTCGGCGTGGTGTACCGCGCGTGCCTCCCCGACGGCCGCGAGGTG GCCATCAAGCGCGCGGAGCGCCGCGGCCCCGTCGCGGAGTCCTCCTCCGTGGCCGCGCGG CGCGCCAACAACCACGAGGTGGCATTCGTCGCGGAGCTGACGCTCCTCTCCCGCGTGAAC CACAAGAACCTCGTCCGGCTCCTCGGCTTCTGCGCCGACGGCGGCGAGCGCATCCTCGTG TACGAGTACATGCCCAACGGCACCCTCCACGACCACCTCCACAAGCGGGCGGCGCCGCTC TCCCCGCCGCTGGCGTCGTGGCCGGCGCGCCTCCGCCTGGCGCTGGGCGCCGCGCGCGGC ATCGAGTACATGCACACCTACGCCGTGCCGCCCATCATCCACCGCGACATCAAGTCCCCC AACATCCTCCTCGACGACGCCTGGACCGCCAAGGTGTCCGACTTCGGGCTCTCGCTGCTC ATCAACGACCTGAGCAGCAGCGGCGGCGGCAACGGATGCAATGCCGCCGCCGCCGACGAC GAGCCGTGCATGACGGCCGGCACGGTGGGGTACATGGACCCGGAGTACTACCGGCTGCAG CACCTGACGGACAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGCTGCTCTCC GGGTGCAAGGTGATCCAGCGGTTCGAGGGCAGCGGCACGCCCAAGAACGTGGTGGACGTG ACCGTGCCGCACATCGAGGCGGACCGCGTGCACCGGGTGCTCGACGCGCGGCTCCCGCTT CCGACGCCGGCGGAGATGGAGGCCGTCGCCTACGTCGGGTACCTGGCCTCGGACTGCGTG CGGCCCGCGGGGCGCGACCGGCCCACCATGAGCGAGGTGGTCGGCGTGCTCGAGCGTGCC GTGGCGGCGTGCGAGGAGCACGACGATGGGGGCGGCGAGGCAGTGCTGTCGCGGTCGTGC ACCGATGGGTCCACTGCGTGA