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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003575_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:48710469:48711552:-1 gene:Zm00001d003575 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

ATGTCAGCGTCGCCGGAGAACGTCGTCGCAGGCGGCAGTGGCCCGCCGGTCGCGTGGTGG
AGCGCGGCCTCGCCGGTGGGCGGCGACGTCGTCCTCTGCAGCGTAGCCCTCCTCTTCGTC
GCCCTGGCCTTGGCGTTCGTCCTGTACCACTACTCCACGGCCACGGTCAGTCGCCGCGGC
GGCGGCGCGGGGGTGGGGGCGGCGCCAACGAGCGCCCAGCAGCACCAGCAGCACGGCACG
CTGGGACGAGGACGCGACGCCACCGGCGGCCTTGACCCGTCGGTGCTCCGGGCGCTGCCG
GTGACGGTTTACGAGGCGAAGGACGACCACCGGGCAGGCGAGGCGCTGGAGTGCGCCGTG
TGCCTCGCCGAGCTCGCCGACGGCGAGCCCGCCAGGTTCCTGCCCAGGTGCGCGCACGGC
TTCCACGCCGAGTGCATCGACCAGTGGCTGCGCGGCCACTCCACGTGCCCGCTCTGCCGC
GTCGACGTCGGCCTGCTCCCTGCGCCGGCGCCGGCGCCGCCGTCCTCGGCCCTCCCTCCG
GCGCTCCCGGCGCCCGCCACCTACCCCACGGACCTGCCGACGAACGTCCTGTTCTGGGGA
TCCCAGGGCGCGGTCACCGTGGCGAGGGCGGCGGTCCGCAGCGGCCCGAGCGCTCCCCGT
GGAGCGCCGCCGCCGCTGGTCATCCATGTCAGGGAAACGGCACCGGCACCGCCACCGCCT
CCGCCGCCGCGTGAAGGCGGCGCGGCAAAAGCGGAGGGCTTGGCGCGGCTGAGTTCTCTC
AGGCGGCTGTGGAGCCGAGGGAGGCATGACGACGCTGCGGCTGCGACCTCCCGTTCCTGC
CGCCGCGCCACTGCCACGGCAACTGCCTAA

Peptide Sequence

PEP ID

Zm00001d003575_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:48710469:48711552:-1 gene:Zm00001d003575 transcript:Zm00001d003575_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

MSASPENVVAGGSGPPVAWWSAASPVGGDVVLCSVALLFVALALAFVLYHYSTATVSRRG
GGAGVGAAPTSAQQHQQHGTLGRGRDATGGLDPSVLRALPVTVYEAKDDHRAGEALECAV
CLAELADGEPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDVGLLPAPAPAPPSSALPP
ALPAPATYPTDLPTNVLFWGSQGAVTVARAAVRSGPSAPRGAPPPLVIHVRETAPAPPPP
PPPREGGAAKAEGLARLSSLRRLWSRGRHDDAAAATSRSCRRATATATA

Transcript Sequence

Transcript ID

Zm00001d003575_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:48710469:48711552:-1 gene:Zm00001d003575 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

TTAACAAGCCCCCTACATCAGCATCAGCTCAAGCTGCTCAATTCAGGTTAACACACTGAT
CCCCACACCCACGCCATCAGCCATCATACCAACTCCATCCAACCGGCTGCACCTAAACCT
CTCCAAGAACGCGCCAATAAACATCCCCTAAATCTCAGCCACAAGTCACCACACAAGATC
TCACGCCGAGGGGCGATCCAAGGCACGAGAGACCATGTCAGCGTCGCCGGAGAACGTCGT
CGCAGGCGGCAGTGGCCCGCCGGTCGCGTGGTGGAGCGCGGCCTCGCCGGTGGGCGGCGA
CGTCGTCCTCTGCAGCGTAGCCCTCCTCTTCGTCGCCCTGGCCTTGGCGTTCGTCCTGTA
CCACTACTCCACGGCCACGGTCAGTCGCCGCGGCGGCGGCGCGGGGGTGGGGGCGGCGCC
AACGAGCGCCCAGCAGCACCAGCAGCACGGCACGCTGGGACGAGGACGCGACGCCACCGG
CGGCCTTGACCCGTCGGTGCTCCGGGCGCTGCCGGTGACGGTTTACGAGGCGAAGGACGA
CCACCGGGCAGGCGAGGCGCTGGAGTGCGCCGTGTGCCTCGCCGAGCTCGCCGACGGCGA
GCCCGCCAGGTTCCTGCCCAGGTGCGCGCACGGCTTCCACGCCGAGTGCATCGACCAGTG
GCTGCGCGGCCACTCCACGTGCCCGCTCTGCCGCGTCGACGTCGGCCTGCTCCCTGCGCC
GGCGCCGGCGCCGCCGTCCTCGGCCCTCCCTCCGGCGCTCCCGGCGCCCGCCACCTACCC
CACGGACCTGCCGACGAACGTCCTGTTCTGGGGATCCCAGGGCGCGGTCACCGTGGCGAG
GGCGGCGGTCCGCAGCGGCCCGAGCGCTCCCCGTGGAGCGCCGCCGCCGCTGGTCATCCA
TGTCAGGGAAACGGCACCGGCACCGCCACCGCCTCCGCCGCCGCGTGAAGGCGGCGCGGC
AAAAGCGGAGGGCTTGGCGCGGCTGAGTTCTCTCAGGCGGCTGTGGAGCCGAGGGAGGCA
TGACGACGCTGCGGCTGCGACCTCCCGTTCCTGCCGCCGCGCCACTGCCACGGCAACTGC
CTAA