Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003556_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:47890408:47901903:-1 gene:Zm00001d003556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation initiation factor IF-2
Sequence	ATGCACACTGGTGAAGGCAAGAATGAGCCACGCCCTGCTGTTGTGACGGTAATGGGACAT GTTGACCATGGTAAAACATCACTTTTGGATGCTCTCCGTCAAACATCTGTTGCTGCCAAG GAAGCTGGTGGTATCACTCAGCATATAGGTGCCTTCGTTGTTGAGATGTCGTCAGGAGCA TCTATAACATTCCTTGATACTCCAGGACATGCTGCATTTAGTGCCATGCGGGCTAGGGGC GCTGCTGTTACGGATATTGTAGTCCTTGTGGTTGCAGCAGATGATGGTATTATGCCTCAG ACACTAGAAGCTATGTCTCATGCAAAAGCAGCAAATGTTCCTATTGTAGTTGCAATAAAC AAATGTGACAAATCTGGAGCTGATCCTGAGAGGGTCAGAATTCAACTTGGTTCAGAAGGT TTACTTTTGGAGGATATGGGTGGGGATGTGCAGGTTGTTGAAATCTCTGCAGTTACAAAA ACTGGTTTGGATAAATTGGAAGAGGCTTTGCTCCTTCAAGCTGAGATGATGGACCTGAAA GCCAGAATAGATGGCCCTGCTCAGGCTTTTGTGGTGGAGGCAAGGGTGGACAGGGGCAGG GGTCCACTCGCAACAGCTATAGTCAAGTATGGCACATTAGTTAGTGGGCAACACATTGTT GTGGGAGCAGAGTGGGGAAGAATTAGGTCTCTTAGAGACACAGCAGGGAATATAACGCAG TCTGCAAAACCTGCAATGCCTATTGAAATTGAGGGGTTAAAGGGCCTTCCAATGGCTGGG GATGACGTTGTAGTTGTTGACTCAGAGGAGAGGGCAAGAATGCTAAGTCATGGGCGGAAG AAGAAGCAGGAGAAAGACAGGCTTCGAAAAATTGATGAGGGGATGGCAGAGGAGCTAGAA ATTAAAGAAGAGACTCCTGAAAGAGTTGAAATGACCATTATTGTCAAAGCCGATGTACAA GGCAGTGTTCAAGCTGTCACAGATGCTTTAAGAAGTCTTAATAGCGCACAGGTGTTCGTG AATGTTGTTCATGTAGGTGTTGGCCCAATCAGTCAGCATGACATTGATCTGGCACAAGCG TGTGGAGCATATATAGTTGGTTTCAACATTCGCAGTCCACCTAGTCCTATCACTCAAGCA GCAGCAAGAGCCAACATAAAGGTTTTGCTTCACAAGGTCATCTATCACCTTCTTGAGGAG ATGGGAAAGGCCATTGTGGAGAAGGCACCGGGAACTGCTGAAACCCAGGTTTCAGGAGAG GCTGAGGTTCTGAACATATTTGAGCTGAAAGGGCGCAGCAAGTCAAAAGGACCGGATGTC AAAATTGCTGGCTGCCGTATAACTGATGGCCACTTCAGCAAATCCGGAACCATGAGACTG TTGAGGAGCGGAGATGTTGTCTTTGAGGGTCCATGCGAGTCTCTGAAGCGGGAGAAGAAG GACGCAGAAACAGTCGAAAAGGGTAACGACTGTGGGCTGGTGATTCAGGATTGCGATGAT TTCCAGGTAGGGGATATCATACAGTGCGTGGAGCAGGTGATTAGGAAGCCCAAGTTCATC TCGACGCAGAGTGGTTCGGTTCGGATTGAATGCTGA

Peptide Sequence

PEP ID	Zm00001d003556_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:47890408:47901903:-1 gene:Zm00001d003556 transcript:Zm00001d003556_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation initiation factor IF-2
Sequence	MHTGEGKNEPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVEMSSGA SITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGIMPQTLEAMSHAKAANVPIVVAIN KCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVTKTGLDKLEEALLLQAEMMDLK ARIDGPAQAFVVEARVDRGRGPLATAIVKYGTLVSGQHIVVGAEWGRIRSLRDTAGNITQ SAKPAMPIEIEGLKGLPMAGDDVVVVDSEERARMLSHGRKKKQEKDRLRKIDEGMAEELE IKEETPERVEMTIIVKADVQGSVQAVTDALRSLNSAQVFVNVVHVGVGPISQHDIDLAQA CGAYIVGFNIRSPPSPITQAAARANIKVLLHKVIYHLLEEMGKAIVEKAPGTAETQVSGE AEVLNIFELKGRSKSKGPDVKIAGCRITDGHFSKSGTMRLLRSGDVVFEGPCESLKREKK DAETVEKGNDCGLVIQDCDDFQVGDIIQCVEQVIRKPKFISTQSGSVRIEC

Transcript Sequence

Transcript ID	Zm00001d003556_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:47890408:47901903:-1 gene:Zm00001d003556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative translation initiation factor IF-2
Sequence	CTGATCGTTTTTTTTTCTGTGTCCAGGGCTCCAGCGCGCTCTCCTCGTCCCTGTTCTTCC CTAGCCGCCGCAGGCTGCAGAGCCCCCGGCGAGCTGCCGCCCCTGCCACATATACTCAGC CTCCGTCCCTCGCCGGTCCCAATACCCTGTCGTCCCCAGACGAAGCCGACGAGCGTGACC CTCGCTTGCCTGAATCTGACGCCTCCGGGCTCGGGCTATAGTTCAATCGGTGCCGGCGGG GCAAGAGGAATGGCGTGGCGGATGATGCGAAGGAAGGATTTTCACACGGGCCTTGTGACT TTGGCGTTCCGAAAGGATCTTGGGTTCAAAAAGTTTTTCTCCAGTGGAAAAATCGGAAAT CTGTCCCAGGTCTACGGCAGTGATAAGCCCAAATACTCTGCTAATTGCATGCCCTCTAAC CATTTCACTATCAGGTGTTTATTTGTTAGCATGGAGTCAGAAAAGGGAGGATGTTGTAGG TCTGAAAGCTCCCAAAAAGGAGAAGCGAGTGAAGAAAGAAAATAGAACACAACCTCCTGT AGAAGCACCATATGTTGCACCAAAAACGAAGATATCTATCAAACCTGTACCAGATAAAAC TGTTGAGATTTTTGACGGGATGACTTTGCTTGACCTTTCTAAACGAACTGGAACTTGGCG TTAATAGCAGAAGAATGCACACTGGTGAAGGCAAGAATGAGCCACGCCCTGCTGTTGTGA CGGTAATGGGACATGTTGACCATGGTAAAACATCACTTTTGGATGCTCTCCGTCAAACAT CTGTTGCTGCCAAGGAAGCTGGTGGTATCACTCAGCATATAGGTGCCTTCGTTGTTGAGA TGTCGTCAGGAGCATCTATAACATTCCTTGATACTCCAGGACATGCTGCATTTAGTGCCA TGCGGGCTAGGGGCGCTGCTGTTACGGATATTGTAGTCCTTGTGGTTGCAGCAGATGATG GTATTATGCCTCAGACACTAGAAGCTATGTCTCATGCAAAAGCAGCAAATGTTCCTATTG TAGTTGCAATAAACAAATGTGACAAATCTGGAGCTGATCCTGAGAGGGTCAGAATTCAAC TTGGTTCAGAAGGTTTACTTTTGGAGGATATGGGTGGGGATGTGCAGGTTGTTGAAATCT CTGCAGTTACAAAAACTGGTTTGGATAAATTGGAAGAGGCTTTGCTCCTTCAAGCTGAGA TGATGGACCTGAAAGCCAGAATAGATGGCCCTGCTCAGGCTTTTGTGGTGGAGGCAAGGG TGGACAGGGGCAGGGGTCCACTCGCAACAGCTATAGTCAAGTATGGCACATTAGTTAGTG GGCAACACATTGTTGTGGGAGCAGAGTGGGGAAGAATTAGGTCTCTTAGAGACACAGCAG GGAATATAACGCAGTCTGCAAAACCTGCAATGCCTATTGAAATTGAGGGGTTAAAGGGCC TTCCAATGGCTGGGGATGACGTTGTAGTTGTTGACTCAGAGGAGAGGGCAAGAATGCTAA GTCATGGGCGGAAGAAGAAGCAGGAGAAAGACAGGCTTCGAAAAATTGATGAGGGGATGG CAGAGGAGCTAGAAATTAAAGAAGAGACTCCTGAAAGAGTTGAAATGACCATTATTGTCA AAGCCGATGTACAAGGCAGTGTTCAAGCTGTCACAGATGCTTTAAGAAGTCTTAATAGCG CACAGGTGTTCGTGAATGTTGTTCATGTAGGTGTTGGCCCAATCAGTCAGCATGACATTG ATCTGGCACAAGCGTGTGGAGCATATATAGTTGGTTTCAACATTCGCAGTCCACCTAGTC CTATCACTCAAGCAGCAGCAAGAGCCAACATAAAGGTTTTGCTTCACAAGGTCATCTATC ACCTTCTTGAGGAGATGGGAAAGGCCATTGTGGAGAAGGCACCGGGAACTGCTGAAACCC AGGTTTCAGGAGAGGCTGAGGTTCTGAACATATTTGAGCTGAAAGGGCGCAGCAAGTCAA AAGGACCGGATGTCAAAATTGCTGGCTGCCGTATAACTGATGGCCACTTCAGCAAATCCG GAACCATGAGACTGTTGAGGAGCGGAGATGTTGTCTTTGAGGGTCCATGCGAGTCTCTGA AGCGGGAGAAGAAGGACGCAGAAACAGTCGAAAAGGGTAACGACTGTGGGCTGGTGATTC AGGATTGCGATGATTTCCAGGTAGGGGATATCATACAGTGCGTGGAGCAGGTGATTAGGA AGCCCAAGTTCATCTCGACGCAGAGTGGTTCGGTTCGGATTGAATGCTGAAATGTAGTAA TGGTTGTGGCTGACACTACTGTTCCATTTCCCTATTAATTCAGCTAGTTGTGCTTTACTG ACCAAAGGTTTCGAGTGTAACAAGATTTTGTTGGCT