Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003448_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:44633799:44639099:1 gene:Zm00001d003448 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

ATGAGGTTAATTCAATCTGTTATTCCTCACATGATGGAAAGAAGGAAAGGAACAATTGTG
AATGTTGGAAGTATTACCGCTCTGGCACCTGGACCATGGGCTGGTGTGTATTCAGCATCC
AAAGCTGCTCTTCATGCATTGAGTGACTCGTTAAGGGTTGAACTAAGAAGCTTCGGCATA
AACGTGATGACCGTCGCCCCAGGAGGGACGAGGTCGAATCTTGGGAATTCTTCTGCAGCC
AAGTATGATCAGATGCACGAGTGGAAGTACTACAAGAAATACGAGGAAGGGCTCCGAGCC
AGGACTGGCATTTCCCAGGGCCCCAGGTCCACTCCAGCAGAAGAGCTTGCAAAGGCGGTG
GTTGCATCGGTTCTAAAGAAGAACCCTCCAGCTTGGTTCGCTTACGGCCAGTACTCTGCT
ATTCTGTCGATTTTGTATTATGCACCGCTATGGTTCAGAGATTGCCTCTATAAGTTTGTC
ATGAAATGTTAG

Peptide Sequence

PEP ID

Zm00001d003448_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:44633799:44639099:1 gene:Zm00001d003448 transcript:Zm00001d003448_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

MRLIQSVIPHMMERRKGTIVNVGSITALAPGPWAGVYSASKAALHALSDSLRVELRSFGI
NVMTVAPGGTRSNLGNSSAAKYDQMHEWKYYKKYEEGLRARTGISQGPRSTPAEELAKAV
VASVLKKNPPAWFAYGQYSAILSILYYAPLWFRDCLYKFVMKC

Transcript Sequence

Transcript ID

Zm00001d003448_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:44633799:44639099:1 gene:Zm00001d003448 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

AGCGAGGAACGTGATCAGAATCAGCCAGTGGTGCTTGTGACGGGGTGCTCGGAGGGCGGC
ATCGGCCACGCGATGGCACGCGCCTTCGCTGCGGCCGGGTGCGCCGTCGTGGCCACGGCG
CGGTCACGCGGTTCCATGCGCGGTCTCGACGGCGACCCGCGGTTCCTGCTGCTGGAGCTC
GACGTGCGCTCCGACGAGAGCGCGCGCGCCGCCGTGGCGGATGCGCTGCGGGAGCACGGC
CGCATCGACGTGCTCGTCAACAACGCTGGGGTTCACCTCGTCGCACCACTCGCCGAGGTG
CCCATGGAGTCCTTCCACCAGGTTTTCGACACCAATGTCTATGGTAGGATTTAAAAAAAA
TGTTGCTTTTTTGTTCTGCTTCTGTCTACTGCATTGTTTGCTGGTATGCCTTGATTGACT
GATTGTGATGCTCTCCAATAAAGACAAGATTTTGGATCCTGGAATCTGAATTAGGCAATT
AGAGGTTAATGAAGGAGTCGAAAGGTTTTTTTTTGGTCCTTCGATAGATAAGAAAGGTAG
AGAAATATAAATTAACTTACCAGACGTTGTTTGTATGAATGATTTAAATTTCTGCAAACA
GTGAATTTTATTTACTAGTAACTCGGGGAACTGGGCAGAGCGCTACATGACCTGTGTGCT
TGTTAGCATGATAGTTGGTTTAAATTTAGGTCATCCCCGAGTGTGTTTAGTGCATCGTAT
ACAGGCATACAGCAACGGGTAATATAGTCAGATTCCTATGGCTGTGAGAAGGGATCTGTT
GCATACGGTAAAATCTGCTGAACCAGTGAATTCAGCAGTTCAAGTGGAACCCTTCTTCAG
TCATAATTGGCAATACCCTTGTGCTTAAAATGCACGATCACAGTAACAAGTGCAGGTTTG
GTATGAAGATTCTTGATAGGAAGCTAAATGAAGTAATGGAAATTGTCTCAGCCCCGTTTG
TTTCGTTGGAATTGAATTTCATTCTAATAATCATAATTTAGACACAGACTAATTAAGTTA
ATATATTTGTATATGTAATATATTTGTATATTATCATAAATCATATAAGAGAGATAGTTA
TACACTATACCTATTCTATAGTACACTTATGCTATAGAGAAGCAGGTAGAAGAGTGTGCT
ATAAGTTGTACATTAGAAAAGTAGCATGTAAATCTATAGAATTAATTTTCATCTCTCACC
CCATGAATTTGAGATAGGCTTATTTATAAACTTTGGAAAATTGTGGAATGTCACATTCTA
AAAAAATATCATACTACATTAGTTAGATTCCAATTCCTCAAAATGAAGGGAAACAAACGG
GGCCTCAGGGATTATGAACCCACTGAATCTATCTTTTTGAATGATGAGAAGGATTACCTC
TTGAACTCATGTATTTGGTGCAAAGCACAGGGTTGCGAACAAGTAGTTTTGCTACTATCT
CATCATGGAGGTTAATTGTCATCAACCAAAGTGACTGAATATAATACGGAGTATTATAAT
TCCAACTTACTAAAGCTAGTTGAGCTGTTGAATGATTGAGTACCTTGTTAACCTCAGTTG
ATGTGTTTGGATGGTTCCCACTTTACTTATTTCCTGATATCATTATGTTCACAAGTTCTG
TTACAGTTCTTTTTTTAAAAAAATATTGACAGGCCTTTATTAGAAGTTAAGTGGTGTCTT
TACAGATAAGTGCACCAACACATTCGGGGAAGTCTGAAAAGAAAACACGAACCCACTAAA
CCTAATAGTTAGTTGAGTCAGCCTTCCGGTAACATTTCCTGGATCAGGGGCATCACCATC
GATCTGTCATGGCATATTGCCTTCAGCTTCTGCACCACTTTGACTGCAAGACAGTCAGCC
TCAAGGGTTATTGGTATCTCTGGCCATTGTGCAGCCAGACAGACACCCTCCAGGCTAGCA
GCCGCCTTAGTCTCTTGATCTTCAGCATCCTTACAGTGAAACAAAATTCGCCATGCTGCT
AATTTGGGCTGATCATCATAAGCCTTTTACAAACCCAACTTATAAGCACAAAAGTCTTCC
CTAGGGATGAAAACAGTCGGAAAATACTAAAACCGTTACCGTTTCCATTTTTTATCGGAA
ACAAAATAAAAAACGGTAACTCCGGAAATGGAAACAATATCGGTATTTCGGAAACGGAAG
TTCAGCACGGAAAATACACTGATAATGGTCGAAATCAAAAATACGATCGGTAAACATATC
AATATAAAAATATCTCAGTATAACAAGTTCACAATACAACAAATTTGACAAAGATCACAA
GTTCACAATATACTAAGTTCATAAAGATTACAAATTTGTAATATAACAAGTTCATAAAGA
TCACAAGTTCACAATATAACGAGCTAATAAAGATCACAAGTTCACAAACTCAAAGTACAC
AAGTTTACAATGATCACAAGTTCACAAGTACAACATAACAAGTTCACAATTCCAAGATAC
AAATCCGGTAATTTCATACAAAAGGTTCATATGAGTTTAGCATGCAACGGTGTGCATCTA
AGTGTCCATATGCTCATCTCAAATAGGAAAAAAAATTCAAGCAAAAACAATATCCACTTG
CTCTAGCAGACATGGCATGCTTACTTATGAAATATTCGGTAACAGTAATTTTTTCATCCC
TAGTCTTCCCCCTGCCGTAGTTTGTCTCTATTTCAATTTTCCGCTCGCTCCAGCTTGCCT
CTAACATGCCGTCACCCCCTGTCCTAGTTGCTGCCGGCAGGAGCGGCAGCCGCCCCAACC
GGTCCCCTTTGGGCAGGACCGACATCCAGTTTTTTCCCTTTGAACAGAGAGACAAACTCT
TGAACTGTTGGAGGGAGCCCTACAGCCCTACCCCTCAGCAGTTCAACAGACAAGCTCTTG
AACTGTCCAGGGAGTTAACTGGGTTACCGGAAACCGAGTTCCTGCTACGCTTAGAGATAA
TCACATATATTCTTGAATTGACACTCATCATCAATGTTGAATTTTAAGTTTCCAACATAC
CATGCTTTCCAGAAACCAAACACCCCCTTAATGGATTACGGGGAATTCATTTGTGGAAGG
GGGGTTTCAATTTGTTGCAGAGAGGGCTTGGGAGGGGAAGCATCATATTCATTTGTGTTA
GTATTGAAAAGGGAATTGTCTGACTCACAAGTTCTGTTAGTATTAGCTTGATGTCAAGAT
TAACTTTAACCCCTTTTCAATAGGTGCAATGAGGTTAATTCAATCTGTTATTCCTCACAT
GATGGAAAGAAGGAAAGGAACAATTGTGAATGTTGGAAGTATTACCGCTCTGGCACCTGG
ACCATGGGCTGGTGTGTATTCAGCATCCAAAGCTGCTCTTCATGCATTGAGTGACTCGTT
AAGGGTTGAACTAAGAAGCTTCGGCATAAACGTGATGACCGTCGCCCCAGGAGGGACGAG
GTCGAATCTTGGGAATTCTTCTGCAGCCAAGTATGATCAGATGCACGAGTGGAAGTACTA
CAAGAAATACGAGGAAGGGCTCCGAGCCAGGACTGGCATTTCCCAGGGCCCCAGGTCCAC
TCCAGCAGAAGAGCTTGCAAAGGCGGTGGTTGCATCGGTTCTAAAGAAGAACCCTCCAGC
TTGGTTCGCTTACGGCCAGTACTCTGCTATTCTGTCGATTTTGTATTATGCACCGCTATG
GTTCAGAGATTGCCTCTATAAGTTTGTCATGAAATGTTAGTCCCTGGAAGAATAATGGCT
GTATGGACCAAAGAGAGAGCTGGACAGGCCCAGTTCAATTCATTTCATTGTACTGACAGC
CTGTTACGTCGTACTCCTATATTGTATATATAGAACTATGCTCTGTACCTGTTGGCAACT
TGGCATACTACAGCTTCTTTCAGGGG