Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003438_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:44457553:44459430:-1 gene:Zm00001d003438 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

ATGGATAACGGCTTCATGGACATCCCCCATCCGCCCCTGATGAATGACCCCTTTGTGTTA
GTGGGATGCTCAGCGCCAAGCTCTACGGTGGAGAACATGGGCCAAAGCACACTCTGTATG
GATGGCCTGAACCCAGCAATTGTTAGTTGCAGCCATGTTAATGGAAATACACAGATAATG
AATGACATAACAGCGAGAGATGATGGCAGCAGGTTAGTCCTTGGTTTGGGTCCAACACCG
AATTTTTATTCTGCAGTGTCCACTGGCTCAAAACAAGCTCAGAGATTGTCAGGCCAGAGT
TCAACTTTCACTGATTCAGGGATGCTGAGGCTTGGCCTTCACACCGATGGTGGGGGAGCA
ATTCAATGTCTGCAAGGACCGAATGGAGCACTCCATTCTTTAGGTATTGTCGACGAGGCT
TCGACATCTACTACTGTAAGGAGCATGGGTGGTTACATGCCATCCCTACTCTTTGCTCCC
CGCTCCAATCCTACTGTCAACGAGACACAAGTAGAAATCCCAGATTCTCTAAACCTCACG
CACAGCACCAGCAACAGTCAGCATATTCAACGTCACCTCCAGTTTAGCCCTGAACCCTCT
GCAATGACCGAGTCTTCATTTGGTGTGAGTTCTGATGTTGTCACCGCAACAACTACATCA
GAACGTAGCCATTCTCGACATCCTAAGAAATGCAGGTTCAAGGGATGTTCCAAAGGTGCA
AGAGGCGCATCAGGATTGTGTATTGCTCATGGAGGTGGGCAGAGATGTCATAAACCTGGA
TGCCATAAAGGAGCCGAGAGCAGCTCTGCATACTGCAAAGCCCACGGTGGCGGTCGTCGG
TGTGAGGAACTTGGTTGTACCAAAAGCGCAGAAGGAAAAACAGATTATTGCATTGCTCAT
GGTGGAGGCCGCCGCTGCGAACATCCTGGCTGTCCTAAAGCTGCCCGGGGTAAGTCTGGG
CGGTGCATCAAGCATGGTGGTGGGAAGAGGTGTTTGGTTAAAGGTTGCATTCGGAGTGCG
GAGGGGAAGGCTGGATTGTGCATTTCTCATGGCGGTGGTCGACGGTGCCAGTATCCAGAT
TGTGGCAAGGGGGCACAGGGCAGCACATTGTACTGCAAGGGACATGGTGGTGGCAAGAGG
TGCGTCTTCGATGGTTGCAGCAAAGGCGCAGAGGGTAGCACACCTCTGTGCAAAGCACAT
GGTGGCGGGAAGCGGTGCATGTTTGAAGGAGGTGGTGTCTGTGCAAAAAGTGTGCACGGG
GCTACTGAATATTGCGTGGCGCATGGAGGAGGAAAGCGCTGTTCCGTGCCCGGCTGCACC
AAGAGTGCTCGTGGCCGCACTGACTGCTGTGTGAAGCACGGTGGCGGCAAGCGGTGCAAG
GTTGAGAACTGTGGCAAGAGCGCCCAGGGGAGCACGGACTTCTGCAAAGCCCATGGCGGA
GGAAAGCGGTGCACATGGGGCACAGGCTGTGAAAAATTCTCCCGTGGCAAGAGTGGCTTC
TGTGCGGCACATGGTACCTTGATGGCCAGGCAGCGAGAACAAGAGGCGGCGAAGAATGTA
GGAAGCATGATTGGACCAGGTCTCTTCAGCGGCATTGTTGTGTCATCTGCCACCGCAGCA
AGCAGCATGACGAACGAGCACTCGTCCTCTGGTGTCAGCACCGCTTCCGACTGCGACGGC
ACTGTGAGGAGCCAATCAATGATTCCTCCACAGGTGCTGGTTCCTCGCTCTATGATGCCT
TCTTGGTCGACTGAGCCTGTAGATGGAGGCAGAGAGGGAGGTCATGTTGTTCCCGAGGGG
AGGGTCCATGGTGGTGGCCTCCTGTCACTCATCGGTGGCAGCTTCAGGAACGCCGATTTG
GAGAAGCTTCAAAGCTAG

Peptide Sequence

PEP ID

Zm00001d003438_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:44457553:44459430:-1 gene:Zm00001d003438 transcript:Zm00001d003438_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

MDNGFMDIPHPPLMNDPFVLVGCSAPSSTVENMGQSTLCMDGLNPAIVSCSHVNGNTQIM
NDITARDDGSRLVLGLGPTPNFYSAVSTGSKQAQRLSGQSSTFTDSGMLRLGLHTDGGGA
IQCLQGPNGALHSLGIVDEASTSTTVRSMGGYMPSLLFAPRSNPTVNETQVEIPDSLNLT
HSTSNSQHIQRHLQFSPEPSAMTESSFGVSSDVVTATTTSERSHSRHPKKCRFKGCSKGA
RGASGLCIAHGGGQRCHKPGCHKGAESSSAYCKAHGGGRRCEELGCTKSAEGKTDYCIAH
GGGRRCEHPGCPKAARGKSGRCIKHGGGKRCLVKGCIRSAEGKAGLCISHGGGRRCQYPD
CGKGAQGSTLYCKGHGGGKRCVFDGCSKGAEGSTPLCKAHGGGKRCMFEGGGVCAKSVHG
ATEYCVAHGGGKRCSVPGCTKSARGRTDCCVKHGGGKRCKVENCGKSAQGSTDFCKAHGG
GKRCTWGTGCEKFSRGKSGFCAAHGTLMARQREQEAAKNVGSMIGPGLFSGIVVSSATAA
SSMTNEHSSSGVSTASDCDGTVRSQSMIPPQVLVPRSMMPSWSTEPVDGGREGGHVVPEG
RVHGGGLLSLIGGSFRNADLEKLQS

Transcript Sequence

Transcript ID

Zm00001d003438_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:44457553:44459430:-1 gene:Zm00001d003438 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

ATGGATAACGGCTTCATGGACATCCCCCATCCGCCCCTGATGAATGACCCCTTTGTGTTA
GTGGGATGCTCAGCGCCAAGCTCTACGGTGGAGAACATGGGCCAAAGCACACTCTGTATG
GATGGCCTGAACCCAGCAATTGTTAGTTGCAGCCATGTTAATGGAAATACACAGATAATG
AATGACATAACAGCGAGAGATGATGGCAGCAGGTTAGTCCTTGGTTTGGGTCCAACACCG
AATTTTTATTCTGCAGTGTCCACTGGCTCAAAACAAGCTCAGAGATTGTCAGGCCAGAGT
TCAACTTTCACTGATTCAGGGATGCTGAGGCTTGGCCTTCACACCGATGGTGGGGGAGCA
ATTCAATGTCTGCAAGGACCGAATGGAGCACTCCATTCTTTAGGTATTGTCGACGAGGCT
TCGACATCTACTACTGTAAGGAGCATGGGTGGTTACATGCCATCCCTACTCTTTGCTCCC
CGCTCCAATCCTACTGTCAACGAGACACAAGTAGAAATCCCAGATTCTCTAAACCTCACG
CACAGCACCAGCAACAGTCAGCATATTCAACGTCACCTCCAGTTTAGCCCTGAACCCTCT
GCAATGACCGAGTCTTCATTTGGTGTGAGTTCTGATGTTGTCACCGCAACAACTACATCA
GAACGTAGCCATTCTCGACATCCTAAGAAATGCAGGTTCAAGGGATGTTCCAAAGGTGCA
AGAGGCGCATCAGGATTGTGTATTGCTCATGGAGGTGGGCAGAGATGTCATAAACCTGGA
TGCCATAAAGGAGCCGAGAGCAGCTCTGCATACTGCAAAGCCCACGGTGGCGGTCGTCGG
TGTGAGGAACTTGGTTGTACCAAAAGCGCAGAAGGAAAAACAGATTATTGCATTGCTCAT
GGTGGAGGCCGCCGCTGCGAACATCCTGGCTGTCCTAAAGCTGCCCGGGGTAAGTCTGGG
CGGTGCATCAAGCATGGTGGTGGGAAGAGGTGTTTGGTTAAAGGTTGCATTCGGAGTGCG
GAGGGGAAGGCTGGATTGTGCATTTCTCATGGCGGTGGTCGACGGTGCCAGTATCCAGAT
TGTGGCAAGGGGGCACAGGGCAGCACATTGTACTGCAAGGGACATGGTGGTGGCAAGAGG
TGCGTCTTCGATGGTTGCAGCAAAGGCGCAGAGGGTAGCACACCTCTGTGCAAAGCACAT
GGTGGCGGGAAGCGGTGCATGTTTGAAGGAGGTGGTGTCTGTGCAAAAAGTGTGCACGGG
GCTACTGAATATTGCGTGGCGCATGGAGGAGGAAAGCGCTGTTCCGTGCCCGGCTGCACC
AAGAGTGCTCGTGGCCGCACTGACTGCTGTGTGAAGCACGGTGGCGGCAAGCGGTGCAAG
GTTGAGAACTGTGGCAAGAGCGCCCAGGGGAGCACGGACTTCTGCAAAGCCCATGGCGGA
GGAAAGCGGTGCACATGGGGCACAGGCTGTGAAAAATTCTCCCGTGGCAAGAGTGGCTTC
TGTGCGGCACATGGTACCTTGATGGCCAGGCAGCGAGAACAAGAGGCGGCGAAGAATGTA
GGAAGCATGATTGGACCAGGTCTCTTCAGCGGCATTGTTGTGTCATCTGCCACCGCAGCA
AGCAGCATGACGAACGAGCACTCGTCCTCTGGTGTCAGCACCGCTTCCGACTGCGACGGC
ACTGTGAGGAGCCAATCAATGATTCCTCCACAGGTGCTGGTTCCTCGCTCTATGATGCCT
TCTTGGTCGACTGAGCCTGTAGATGGAGGCAGAGAGGGAGGTCATGTTGTTCCCGAGGGG
AGGGTCCATGGTGGTGGCCTCCTGTCACTCATCGGTGGCAGCTTCAGGAACGCCGATTTG
GAGAAGCTTCAAAGCTAG