Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003393_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:42619388:42625326:-1 gene:Zm00001d003393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant UBX domain-containing protein 4
Sequence

ATGAGCTCCTCCTCCAACAGCGGGAAGAAGCCGGCGCCCGCCGGCGGCCGCGGGGGGCCC
ACCATCCGCACGCTCGCCGACATAAACCGTGGCCCTGCCGGTTTCCCAGGTGCCGGAGGC
GGCAGCAGCGATGACGACGAGCCCCAGGAGTACTACACCGGCGGCGAGAAGAGTGGAATG
CTTGTTCAAGATCCAACAAGAAGAAATGACGTGGATGCAATATTTGAACAAGCAAGACAG
GCGGGCGCTATCCATGGAATGCCCCCTTTTCTTGGTGGCGAGTCTTCCAGCTCTAGGAGC
TTTACTGGGACTGGCCGACTTCTTACAGGGGAGACAGTACCATCTGCTGCACCTCAGGAA
CCAGTACCAATTCGAATACGCCACAATATACATTTGTGGAACAATGGCTTTACTGTGGAT
GATGGTCCACTGAGATACTACGATGATCCTGAAAATGAAGAGTTCCTTGAGAGCCTTAAG
ATGTCAAAGTGCCCCAAGGAGCTGGTGCCTACTGATGGAGAACATGTTGATGTGTCTGTT
ATTAAAAGGATGGAAGATTACCGGGAACCTGTAAGGCCTCAATCAGCTTTCCAGGGTGTT
GGAAGAACCCTTGGTGGTGGACCTTCCCCAGATGAGAGTGCAACACCTGCTCCTGCACCA
GCGGCCCCTGCTGCTTCGAGGTCCGCTGGCATAGTCGTGGATGACTCCCAGCCATTTACA
TCCATACAGCTGAGGCTGGCTGACGGCACTCGCATGGTCGCCCGGTTCAACATGCACCAC
ACCGTGGGAGACATCAGGTCCTTCATCGACGCATCTCGGCCTGGAACCGCAAGGCCGTAT
CAGCTGCAGACAGGTTTCCCACCCAAGCAGCTGGCTGACCCAACGCAGACCGTGGTGCAA
GCTGGGCTGGCAAACTCGGTTATCATGCAGAAGATGTAA

Peptide Sequence

PEP ID

Zm00001d003393_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:42619388:42625326:-1 gene:Zm00001d003393 transcript:Zm00001d003393_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant UBX domain-containing protein 4
Sequence

MSSSSNSGKKPAPAGGRGGPTIRTLADINRGPAGFPGAGGGSSDDDEPQEYYTGGEKSGM
LVQDPTRRNDVDAIFEQARQAGAIHGMPPFLGGESSSSRSFTGTGRLLTGETVPSAAPQE
PVPIRIRHNIHLWNNGFTVDDGPLRYYDDPENEEFLESLKMSKCPKELVPTDGEHVDVSV
IKRMEDYREPVRPQSAFQGVGRTLGGGPSPDESATPAPAPAAPAASRSAGIVVDDSQPFT
SIQLRLADGTRMVARFNMHHTVGDIRSFIDASRPGTARPYQLQTGFPPKQLADPTQTVVQ
AGLANSVIMQKM

Transcript Sequence

Transcript ID

Zm00001d003393_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:42619388:42625326:-1 gene:Zm00001d003393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant UBX domain-containing protein 4
Sequence

GAGTGACAAGACGCGACGCGACGCCAAGCCAAGACCAAATTACCAAACCCTACCCCTTCG
CCGCGACCGCGATCCCCCACATCGTTGGCGATGAGCTCCTCCTCCAACAGCGGGAAGAAG
CCGGCGCCCGCCGGCGGCCGCGGGGGGCCCACCATCCGCACGCTCGCCGACATAAACCGT
GGCCCTGCCGGTTTCCCAGGTGCCGGAGGCGGCAGCAGCGATGACGACGAGCCCCAGGAG
TACTACACCGGCGGCGAGAAGAGTGGAATGCTTGTTCAAGATCCAACAAGAAGAAATGAC
GTGGATGCAATATTTGAACAAGCAAGACAGGCGGGCGCTATCCATGGAATGCCCCCTTTT
CTTGGTGGCGAGTCTTCCAGCTCTAGGAGCTTTACTGGGACTGGCCGACTTCTTACAGGG
GAGACAGTACCATCTGCTGCACCTCAGGAACCAGTACCAATTCGAATACGCCACAATATA
CATTTGTGGAACAATGGCTTTACTGTGGATGATGGTCCACTGAGATACTACGATGATCCT
GAAAATGAAGAGTTCCTTGAGAGCCTTAAGATGTCAAAGTGCCCCAAGGAGCTGGTGCCT
ACTGATGGAGAACATGTTGATGTGTCTGTTATTAAAAGGATGGAAGATTACCGGGAACCT
GTAAGGCCTCAATCAGCTTTCCAGGGTGTTGGAAGAACCCTTGGTGGTGGACCTTCCCCA
GATGAGAGTGCAACACCTGCTCCTGCACCAGCGGCCCCTGCTGCTTCGAGGTCCGCTGGC
ATAGTCGTGGATGACTCCCAGCCATTTACATCCATACAGCTGAGGCTGGCTGACGGCACT
CGCATGGTCGCCCGGTTCAACATGCACCACACCGTGGGAGACATCAGGTCCTTCATCGAC
GCATCTCGGCCTGGAACCGCAAGGCCGTATCAGCTGCAGACAGGTTTCCCACCCAAGCAG
CTGGCTGACCCAACGCAGACCGTGGTGCAAGCTGGGCTGGCAAACTCGGTTATCATGCAG
AAGATGTAATGTTTCGACAACATGGGTAACTAGGATGCATCGTACTGCATCTTTTGAGAA
CTGTCTTATTGTGGTTGACATACTGCTCTGGTGCGTCATTCATGGTCTTAATAGTTTATA
GTTCATCTATGAACTGAATTATGCTTTCTGATTTACAGCAGATACTGAAGTGTCGAT