Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003379_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:42234465:42235544:-1 gene:Zm00001d003379 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related protein2 description:Major latex protein 22%3B Pathogenesis-related protein 2

Sequence

ATGGCGTCCAAGGTTGAGCTGGTGGTGGAGGTCAAGTCCCCGGCTGACAAGCTGTGGGCG
GCGCTGCGTGACTCGACGGAGCTGTTCCCCAAGATCTTCCCCGAGCAGTACAAGAGCATC
GAGACCGTCGAGGGCGACGGCAAGTCGGCCGGCACCGTCCGCCTCCTCAAGTACACCGAG
GCGGTGCCGATGCTGACGTTCGCCAAGGAGAAGCTTGAGACGGCGGACGACGAGAACAAG
GTGGTGTCGTACAGCGTGGTGGACGGCGAGCTGGCGGACTTCTACAAGAACTTCAAGATC
ACGCTGAAGGTGACTCCGGCCAAGGCGGAGGGCGAGGGCGGCGCCGTCGTCAGCTGGGCC
ATGGAGTTCGACAAGGCCAACGACCAGGTGCCTGACCCGGACGTCATCAAGGAGACCGCC
ACCAAGACGTTCCACGACCTCGACGACTACCTCCTCAAGAACTAG

Peptide Sequence

PEP ID

Zm00001d003379_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:42234465:42235544:-1 gene:Zm00001d003379 transcript:Zm00001d003379_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related protein2 description:Major latex protein 22%3B Pathogenesis-related protein 2

Sequence

MASKVELVVEVKSPADKLWAALRDSTELFPKIFPEQYKSIETVEGDGKSAGTVRLLKYTE
AVPMLTFAKEKLETADDENKVVSYSVVDGELADFYKNFKITLKVTPAKAEGEGGAVVSWA
MEFDKANDQVPDPDVIKETATKTFHDLDDYLLKN

Transcript Sequence

Transcript ID

Zm00001d003379_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:42234465:42235544:-1 gene:Zm00001d003379 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pathogenesis-related protein2 description:Major latex protein 22%3B Pathogenesis-related protein 2

Sequence

ATCGCCAGACACACTATAGACCACAGCCAGTCAGCCACATCACTAGCTATCTGTGCAGAG
GCAATGGCGTCCAAGGTTGAGCTGGTGGTGGAGGTCAAGTCCCCGGCTGACAAGCTGTGG
GCGGCGCTGCGTGACTCGACGGAGCTGTTCCCCAAGATCTTCCCCGAGCAGTACAAGAGC
ATCGAGACCGTCGAGGGCGACGGCAAGTCGGCCGGCACCGTCCGCCTCCTCAAGTACACC
GAGGCGGTGCCGATGCTGACGTTCGCCAAGGAGAAGCTTGAGACGGCGGACGACGAGAAC
AAGGTGGTGTCGTACAGCGTGGTGGACGGCGAGCTGGCGGACTTCTACAAGAACTTCAAG
ATCACGCTGAAGGTGACTCCGGCCAAGGCGGAGGGCGAGGGCGGCGCCGTCGTCAGCTGG
GCCATGGAGTTCGACAAGGCCAACGACCAGGTGCCTGACCCGGACGTCATCAAGGAGACC
GCCACCAAGACGTTCCACGACCTCGACGACTACCTCCTCAAGAACTAGATGGAGCGAGAA
CTGGAGATGGTCCAGTACAGTACAGTTCCAGTCCATTCATCGACGCGTCACAGTTTACTA
GTGCACGTCGCTGGTGTGGTGTGGTGCCCGTGCTGGTTCCTTAATTTGCTTACTAGCTAG
CTACGTACCGCGGTCCGTGTCCTTGTCTCTGGCTGATGTTTGCTGCCTGCGTCCGTCGTG
CATCCGACGACGTGTCGTTGCGTTGCGCACCGGTCCTCCGAGTCAATAAAGCTCTCCGTG
TTCATTGCGCATCGCTTCGAACCTATCGTACACAGTTGCTTTGTCGATTGTCTAAATCAT
TTGATAAAGTCGGTAAAATACTCAGCAAAATCTTTATCGAGTGTGACACTCGACAAAGAA
TTCTCGTTGAACTGTACATCGGTAACGACTTTTTTGCTGAGTACTTTTATCGGTCACTCA
ATAAAGACTTTGGCGAGTG