Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003333_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:2:40554955:40561508:1 gene:Zm00001d003333 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	ATGGCTTCAAAGACTTGTCCTGTGTGCAAAGTATTTGCTTCCACTTCGAACACCACATTG AATGCCCACATAGATCAGTGCCTTTCTGTTGAGTCTAATACTGAGCTTGTTGAAACTGTC CTTGTAAAGCCTAAAGTGAAGCCAAGGAAGAAGCGATTAATGGTGGACATATACAAGACT GCTCTTCCATACACCCTTGAGGATCTTGATCGGAGGAATTGCACTAATTGGGCAGTTGAG TTGGCTATGTCTCCAGTGAGCAAAGAGGTTTGCACTGAGAACGGAAGCCCAGAAGTGGTA TCATTTGACAGAAGAGATGATGAAAGAGAAGGAGATGTTTATGTTGATTCTAATGGCATA AAAATTAGAATTTTGTCCAAGTGTAATGATGTACCTTTGGTGTTGAAAGATGACCTTGGT TCTAGCAAAGTTGCGAAGCATGGAACTGGAAAAGGTATACTGATGAGCAAAAAGATGCTG AAGTCAAAGCTTTTGAAGAATAAGAAGCTGAAGATGCATGGAAAGAAGTACAACAAAACA AGCCATTTGAACTCCCAGGTTCAAGCAGACCCGCATGACGATATTAATGAGGAAACCTCC GAGGAGGAGAGGAATGCATGGAATCCTTCTGAAAGCACCAGCAATTGTGGTTCCAGGACT ATGCAGCAGTGGGTATGCTCCAAACGATCAGATATCAACAAGAAATTAAGCAAAAACCAT AGTGGTAAAACATTTGACAAAGTGGCACCTGGAGCACAGAAATCGGATAGGAGCAGCATG TTTGGCTTTAATGATTCTCAAGTTCCAGAAAGTCCTGTTGGGGTGTTTTCTTCTGAGTCA TTATACATGGCCACAACTTCAGAAGCCACTGGTGTTGAGCAGAGTAATGGTCCTTCAAAA GTGCTTAGATCGATTCCTACATGGTCTTCAAAAACTCATCTTCAGAGCAGTGTCATACCA AAAGTACCTAGATCAGCTGCTGCTCTTGCAAAGAGAAAAATTAAGGAGATTGGGAGGAGA GAAGCTACCAAACTAGATAATTATGATGTAGTGAGGAATCCCACTTCAGTGAAAAGATTT GAAGCTAGGACTCTTTCCTTCTCCACTGCAGGGCCAAGCAATGGACCAAACAGGTCAGCA TCTACATCAAAGAAGATCCGGAAGCACCGATCTCCGTTGAGGACTGGCAAGCGTGCATTT TCACCTTCTAGTACTAGATTAGTTCATGGCTTTGGTGACGAGCATGAACCTGAGACCAGA CATGTAAATAAGAAATTCAGGATTACTAGTAATGAGGCTCCCAAGAAGTTTTTGAAGCAT ACTGAAGAGGATACTGCAGATAATGACTTCTCTTTTGCAAGTGACATGCCAGTATCGGGA CAACAGAATGATCAATATGATGTTGCACAGGAAACAGAGGGTACACAAATGGATTGTGAA GGTGAAGATGCTGAAACTGATGTGCCATATGATTCAGTATCCAGAAGTGATCCTGCTGAG TGTTGCAACCAAATAAGTGATGTTTCTCTGAGTCCTGAAAACTACAGAACAGCAGACGAT GATGTTTTGGTTGAAGGCTGTAGTGTAGCTGTGGAGGATCCAAACTCCAGTGAGCAATTA GCACATGGCCATGAATCCAACAGTGCTGCCAATAATGAAATGGATGAATGGCAGATGGAT CCTACTTCAACAAAGGAATCTAGTCCCTGCTTAACTAGTAACAGGGACATGGGCCCTGGA GGTCATCAAGATAACTCATCAATAACATCAAATGGAGAAGAAGACTTTAATGAAGAGCAT GGTCTGCCACTCGGAAGGGGCTCACTAGATTCTCCCATTTCGACTGCCTCAACTATGGCC CTTCCAGCTGCTTTGAAGGATTCAAGGACTAATGAGGAAGAACCTGGCCCATCTACTGGT AGGACTGTTGAAGAGCAAACCACCGGGTGCTTGAATCAAGAAACCAATTCAATACCTATG GCCAGAGAAGGTGAACTGCCCAGTGAGAAGCCTTTTCGTTGTTCTTGCCAGGAAAACATT GCCAGAGAGTCTCGTCAAAGTCCTGTTGCCAGACCAATGCTGAATTCTACTGGGAAGCAG GTTCCGCAATTGCACATTGGTTCGAGGGCATCATCATCTTTCAGCACGTACCAAAGAACC AGCGCAAAGCCCAACCCTTGCTTTGATCCACATGATCATCTTTTAGCGGCTAAGGTCCCA GCAGAATCTGCTATCAGCTTCCCTTACTCCACAGACTGTATAAGCCCCTCATTCCAAACT CAGCTTCCTTCACCATCAAATCCTGTCTTGAGGCTGATGGGTAAGGATTTGATGGTGATG AACAGTGAAGAGAGTGTGCATCCTCAAGCACCAAGTTCAGACTACATCTTGAGAGGGAAT TATCCAGCACCTGTTGGTTTCATGCCTCCAAACTACCAACATCTCAGTAATTCTGCATTT ATCAACATGCCGCCGACCACAGCCAGCCACCAGATCCCTCTACCAAGTGTTCAAGCTAGC GGCTTCGTTGCTCCTCCATTGCGTGGTGGTTCTGTGATGCAATCTGACCATCACTCCCAG CAGAAGCCCTACAGAAACATCATGCCTGCCATGCATCGCCCAACCTACATGATGAAAGAA GTGATCGTGATCAACGACTCTCCTGAGCGCAGAAGTGAGCCACAAGGTAGCATGCTGTTC CCCCCTGCTCCGCCTCCACCACTTCCGGTAGTACCAAACAACATGCCACCCCGTCCGTTC TACTGCTTTCCACCGCAGAGCCCAGTTTTGCCAAGGGAGAGGGGGGCTGTTGGGTCCATG CTCGTGTACGCAAACGTTGGCTCAATGGTCGGCGTCAATTCGTCGAGTCAAGGAAGCCAA ACGGAAGTCGCCAGTCCTTACATGCCAAACCCGTTCTTCGTGCAGTCTCGAGCCGGTTAC ATGAACCCGCCAGTGTACTACTCGCAGAATCTGGGGTGA

Peptide Sequence

PEP ID	Zm00001d003333_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:2:40554955:40561508:1 gene:Zm00001d003333 transcript:Zm00001d003333_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	MASKTCPVCKVFASTSNTTLNAHIDQCLSVESNTELVETVLVKPKVKPRKKRLMVDIYKT ALPYTLEDLDRRNCTNWAVELAMSPVSKEVCTENGSPEVVSFDRRDDEREGDVYVDSNGI KIRILSKCNDVPLVLKDDLGSSKVAKHGTGKGILMSKKMLKSKLLKNKKLKMHGKKYNKT SHLNSQVQADPHDDINEETSEEERNAWNPSESTSNCGSRTMQQWVCSKRSDINKKLSKNH SGKTFDKVAPGAQKSDRSSMFGFNDSQVPESPVGVFSSESLYMATTSEATGVEQSNGPSK VLRSIPTWSSKTHLQSSVIPKVPRSAAALAKRKIKEIGRREATKLDNYDVVRNPTSVKRF EARTLSFSTAGPSNGPNRSASTSKKIRKHRSPLRTGKRAFSPSSTRLVHGFGDEHEPETR HVNKKFRITSNEAPKKFLKHTEEDTADNDFSFASDMPVSGQQNDQYDVAQETEGTQMDCE GEDAETDVPYDSVSRSDPAECCNQISDVSLSPENYRTADDDVLVEGCSVAVEDPNSSEQL AHGHESNSAANNEMDEWQMDPTSTKESSPCLTSNRDMGPGGHQDNSSITSNGEEDFNEEH GLPLGRGSLDSPISTASTMALPAALKDSRTNEEEPGPSTGRTVEEQTTGCLNQETNSIPM AREGELPSEKPFRCSCQENIARESRQSPVARPMLNSTGKQVPQLHIGSRASSSFSTYQRT SAKPNPCFDPHDHLLAAKVPAESAISFPYSTDCISPSFQTQLPSPSNPVLRLMGKDLMVM NSEESVHPQAPSSDYILRGNYPAPVGFMPPNYQHLSNSAFINMPPTTASHQIPLPSVQAS GFVAPPLRGGSVMQSDHHSQQKPYRNIMPAMHRPTYMMKEVIVINDSPERRSEPQGSMLF PPAPPPPLPVVPNNMPPRPFYCFPPQSPVLPRERGAVGSMLVYANVGSMVGVNSSSQGSQ TEVASPYMPNPFFVQSRAGYMNPPVYYSQNLG

Transcript Sequence

Transcript ID	Zm00001d003333_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:40554955:40561508:1 gene:Zm00001d003333 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	CCAGTCCCCAGAAATCAAAACCTCCACCACCACAGAGCTCCGAGACCCTCACCCTCCTCC CCGTCTGCTCGCTGCGTGGATCTACCGGCAGGATGCTCTCTCCATCGCGCGCGCCGCCCG GGGAGCGCCTGTGAAGAAGGAACGGAAGGTGCCTGATGAGATAGTGGACGGACAAGGAAG TGAAGTTTCTTGTTCTATCCACCTGTTGAACTTACCAACTTGGTATGCTGGAGTGCAAGA ATAAGAGCAGGCCCAATCGCTTCACAGCTATTGGGTTCTCGGTGCCGACTGTAGCAGCCG CAGATCTGGAGGGAGCAGCGAAGGCGTTCATCAGATGTTATCCAGTGAGCACCCTTCAGG CCCCTCATGTTCCTCCAAGTCTGGTGGCCCGGGTGTGAGCGCTGATCCGGCGACGTCCGC GGCGGAGCAGCCAGCGTGCCAGGATCCCAGAGATCTGATCCAATCGTGAAAGATATATGT GTATATCCTCTTTGATTCAATACCTTTGGAGAGAGATTATTTTTCGGTGTTTAAGTTCTT GATGCTGGATCTCTGTCTTTCTGATGCGTCGATTAATTATTGGCTGCTGCTTTGAGGGAT CGGATTGGGTATGAATGGTTGCTTTCAGGGTTAATCCGTGTTATTGTCCGGGGGTGTTTA ATTAGTTTAATTTTCTGCTGATTAATATAAAGGTGGCCTTTTTTTCCACCCCAGAATCTG AAAATAAAAGGATGCTCCTCTCATTAATCTTTGTCCACTGCCTACTATTGGTTTTCTTTT CCATATACGTGGTGGTTCTGCGATAAACAGGCAGGCGACATATTTTTGGAGATTTCAGTT TTGATATGACAGCATGTTCAGTTGGTCCACGTTGATGTTGTTTTTTCTCTCTTCTTTTCA ACCTATTGTGGAGGGTTTGAATCTTATACAGTTTGGCAACACTATACATGAGTGTTCGTC ATATAGGCACGTATTACCATAGATTATGTTTTTGCTTCAAGGAGCAAAGGCATCAAGAGA AGCTGGCCTTTCCATCCACACTCGTTGCAGCTTTGCCTGGAGCATGGTGTGAAGGATCCA TTGCCTCCATTTGAGCCTCCCGATTTGATCCGGTCTCAGCCATTAAATATTTCCACAGAC ATTAAGCAATCTGCTGCGTGCTCAGAACCCATCATTAGTGTTGGTCTGGTGAAGACCAAA GATGCCGGTTCGTCAAACGAGTATACAGGCGATATCAACTTCCAGTCATGCCAGCCAGTA GATGAGTCACCTGGACCTTCGCCATACACATCACCGGAGGATGGGAAATCCGGTATCGAC CAAGTGGGAAGTACAAATGAATCAGATCATACTGACGAGGCTATACCAATAGATCTGCAA GATAATAGCTGTACAAGAGCAAGTCGGCGAACTGAGGTTGCTGTGCCCTTGCGGCGGTTG AGAAATCTTGACTCATCGTGCGAGCCATCTGAAAAGAAGTGCAAATTTGTTGTCAAGTTA GGTGCCTCGGCAGATATTCGGCGGCCAGAGGATATAGCATCTAACTCTAGCTCAGTTTCA GATCCGATGGCTTCAAAGACTTGTCCTGTGTGCAAAGTATTTGCTTCCACTTCGAACACC ACATTGAATGCCCACATAGATCAGTGCCTTTCTGTTGAGTCTAATACTGAGCTTGTTGAA ACTGTCCTTGTAAAGCCTAAAGTGAAGCCAAGGAAGAAGCGATTAATGGTGGACATATAC AAGACTGCTCTTCCATACACCCTTGAGGATCTTGATCGGAGGAATTGCACTAATTGGGCA GTTGAGTTGGCTATGTCTCCAGTGAGCAAAGAGGTTTGCACTGAGAACGGAAGCCCAGAA GTGGTATCATTTGACAGAAGAGATGATGAAAGAGAAGGAGATGTTTATGTTGATTCTAAT GGCATAAAAATTAGAATTTTGTCCAAGTGTAATGATGTACCTTTGGTGTTGAAAGATGAC CTTGGTTCTAGCAAAGTTGCGAAGCATGGAACTGGAAAAGGTATACTGATGAGCAAAAAG ATGCTGAAGTCAAAGCTTTTGAAGAATAAGAAGCTGAAGATGCATGGAAAGAAGTACAAC AAAACAAGCCATTTGAACTCCCAGGTTCAAGCAGACCCGCATGACGATATTAATGAGGAA ACCTCCGAGGAGGAGAGGAATGCATGGAATCCTTCTGAAAGCACCAGCAATTGTGGTTCC AGGACTATGCAGCAGTGGGTATGCTCCAAACGATCAGATATCAACAAGAAATTAAGCAAA AACCATAGTGGTAAAACATTTGACAAAGTGGCACCTGGAGCACAGAAATCGGATAGGAGC AGCATGTTTGGCTTTAATGATTCTCAAGTTCCAGAAAGTCCTGTTGGGGTGTTTTCTTCT GAGTCATTATACATGGCCACAACTTCAGAAGCCACTGGTGTTGAGCAGAGTAATGGTCCT TCAAAAGTGCTTAGATCGATTCCTACATGGTCTTCAAAAACTCATCTTCAGAGCAGTGTC ATACCAAAAGTACCTAGATCAGCTGCTGCTCTTGCAAAGAGAAAAATTAAGGAGATTGGG AGGAGAGAAGCTACCAAACTAGATAATTATGATGTAGTGAGGAATCCCACTTCAGTGAAA AGATTTGAAGCTAGGACTCTTTCCTTCTCCACTGCAGGGCCAAGCAATGGACCAAACAGG TCAGCATCTACATCAAAGAAGATCCGGAAGCACCGATCTCCGTTGAGGACTGGCAAGCGT GCATTTTCACCTTCTAGTACTAGATTAGTTCATGGCTTTGGTGACGAGCATGAACCTGAG ACCAGACATGTAAATAAGAAATTCAGGATTACTAGTAATGAGGCTCCCAAGAAGTTTTTG AAGCATACTGAAGAGGATACTGCAGATAATGACTTCTCTTTTGCAAGTGACATGCCAGTA TCGGGACAACAGAATGATCAATATGATGTTGCACAGGAAACAGAGGGTACACAAATGGAT TGTGAAGGTGAAGATGCTGAAACTGATGTGCCATATGATTCAGTATCCAGAAGTGATCCT GCTGAGTGTTGCAACCAAATAAGTGATGTTTCTCTGAGTCCTGAAAACTACAGAACAGCA GACGATGATGTTTTGGTTGAAGGCTGTAGTGTAGCTGTGGAGGATCCAAACTCCAGTGAG CAATTAGCACATGGCCATGAATCCAACAGTGCTGCCAATAATGAAATGGATGAATGGCAG ATGGATCCTACTTCAACAAAGGAATCTAGTCCCTGCTTAACTAGTAACAGGGACATGGGC CCTGGAGGTCATCAAGATAACTCATCAATAACATCAAATGGAGAAGAAGACTTTAATGAA GAGCATGGTCTGCCACTCGGAAGGGGCTCACTAGATTCTCCCATTTCGACTGCCTCAACT ATGGCCCTTCCAGCTGCTTTGAAGGATTCAAGGACTAATGAGGAAGAACCTGGCCCATCT ACTGGTAGGACTGTTGAAGAGCAAACCACCGGGTGCTTGAATCAAGAAACCAATTCAATA CCTATGGCCAGAGAAGGTGAACTGCCCAGTGAGAAGCCTTTTCGTTGTTCTTGCCAGGAA AACATTGCCAGAGAGTCTCGTCAAAGTCCTGTTGCCAGACCAATGCTGAATTCTACTGGG AAGCAGGTTCCGCAATTGCACATTGGTTCGAGGGCATCATCATCTTTCAGCACGTACCAA AGAACCAGCGCAAAGCCCAACCCTTGCTTTGATCCACATGATCATCTTTTAGCGGCTAAG GTCCCAGCAGAATCTGCTATCAGCTTCCCTTACTCCACAGACTGTATAAGCCCCTCATTC CAAACTCAGCTTCCTTCACCATCAAATCCTGTCTTGAGGCTGATGGGTAAGGATTTGATG GTGATGAACAGTGAAGAGAGTGTGCATCCTCAAGCACCAAGTTCAGACTACATCTTGAGA GGGAATTATCCAGCACCTGTTGGTTTCATGCCTCCAAACTACCAACATCTCAGTAATTCT GCATTTATCAACATGCCGCCGACCACAGCCAGCCACCAGATCCCTCTACCAAGTGTTCAA GCTAGCGGCTTCGTTGCTCCTCCATTGCGTGGTGGTTCTGTGATGCAATCTGACCATCAC TCCCAGCAGAAGCCCTACAGAAACATCATGCCTGCCATGCATCGCCCAACCTACATGATG AAAGAAGTGATCGTGATCAACGACTCTCCTGAGCGCAGAAGTGAGCCACAAGGTAGCATG CTGTTCCCCCCTGCTCCGCCTCCACCACTTCCGGTAGTACCAAACAACATGCCACCCCGT CCGTTCTACTGCTTTCCACCGCAGAGCCCAGTTTTGCCAAGGGAGAGGGGGGCTGTTGGG TCCATGCTCGTGTACGCAAACGTTGGCTCAATGGTCGGCGTCAATTCGTCGAGTCAAGGA AGCCAAACGGAAGTCGCCAGTCCTTACATGCCAAACCCGTTCTTCGTGCAGTCTCGAGCC GGTTACATGAACCCGCCAGTGTACTACTCGCAGAATCTGGGGTGATGGTTTCTCAGTAAC TCGAATGACCAGGAGAACTCCATTTGGCTTGCCGGTCGTCATCGCTCTGTAAAAGTGGGG GTACATGGGAGTTTCGTGATGGGTCTAAAATGCTGAGACTAGTCAGCCTGCAAGATGTCT GAGTTTCATGAGGATTTTCACATAGGTTGCTTTAGATTTTCTTTTCTTTTTTTTGGTTCC GACTTAAAGGTACAACATGTTTGCCGTCAAAAGTGTTTTAATTACTTCCCTGCAAAGTCG CAGTAAATTATAGTATGCAATTCCCAACAGTTCTGCAAAGGAATATATCTCAGTATTTAT C