Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003309_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:39693129:39700373:1 gene:Zm00001d003309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper amine oxidase family protein
Sequence

ATGGCCGCAGCTAAGGAAAAGGCGTCGGTATGCTGCCGCGATGCGCCCGCGCGTGTCGCT
GGCGCCCCAGTCGTCCCCATGCGCGCGATCGCCGCGTCCCCGGTCGGCAAGGTCGTCGCC
CTCGCCGCGGGAGGCGGTGAGCGCGTTTCTGCGTCGGCTGCTGGCTCAAGCGGCGCCGTG
ATCGAGGAGATCGCCGCGGTCCAGCCCACCACCGCGAAGGCATCCTCCAAAGGGATACCA
ATAATGACAAGAGCCCAGAGGTGTCACCCTTTGGACCCATTATCTGCTGCTGAAATTGCA
GTTGCTGTAGCAACTGTAAGAGTTGCTGGAAGATCTCCTGAGGAAAGAGACAGCATGCGC
TTTGTTGAAGCTGTGCTGTTGGAGCCAGAAAAGAATGTTGTGGCACTGGCCGACGCCTAC
TTCTTTCCACCTTTCCAACCATCACTGCTCCCTAGAAGCAAAGGTTCTGCTGTTATTCCA
AGCAGGCTACCTCCTAGGAGGGCCAGACTTGTTGTCTATAACAAACAATCAAATGAGACA
AGTATTTGGATAGTGGAACTATCTGAAGTGCATGCCGCTACTAGGGGTGGACATCACAGA
GGGAAGGTGATATCATCTGAAGTTATTCCGGATGTTCAACCTGCCATGGATGCTATGGAG
TATGCTGAATGTGAGGCTACTGTCAAAAGTTATCCTCCATTTATTGAAGCTATGAAGAGA
AGAGGTGTGGATGACATGGATCTTGTTATGGTGGATGCTTGGTGTGCTGGCTACTACAGC
GAAGCTGATGCTCCTAGTCGCAGACTTGGCAAGCCTTTGATATTTTGCAGAACTGAGAGT
GATAGCCCCATGGAGAATGGTTATGCTCGTCCTGTAGAAGGAATCCATGTTGTTGTTGAT
ATGCAGAATAATGCTGTGATAGAGTTTGAAGATAGGAAGTTGGTTCCTCTACCCCCTCCA
GATCATTTGAGAAACTATACTCCTGGGGAGACAAGAGGAGGTGTTGATCGAAGTGATGTA
AAACCACTTATCATCAATCAGCCTGAGGGTCCAAGTTTTCGAATTAATGGCTATTTTGTG
GAATGGCAGAAGTGGAACTTCCGTATTGGCTTCACCCCCAAAGAGGGTTTGGTTATCTAT
TCTGTTGCTTATGTTGATGGTAGCCGTGGACGTAGACCTATAGCACATAGGCTGAGCTTT
GTTGAGATGGTTGTTCCTTATGGAGATCCAAGTGAACCACATTATCGCAAGAATGCATTT
GATGCTGGAGAAGATGGACTTGGAAAAAATGCTCATTCTCTTAAGAAGGGATGCGATTGC
TTGGGCTACATAAAATATTTTGATGCACATTTCACAAACTTCACTGGTGGTGTGGAGACA
ATTGAGAACTGTGTTTGTTTGCATGAGGAGGATCATGGGATCCTTTGGAAACATCAAGAC
TGGAGAACTGGTTTAGCAGAAGTAAGGCGGTCAAGGAGGCTCACTGTTTCATTTATCTGT
ACAGTTGCAAACTATGAGTATGGTTTTTACTGGCACTTCTATCAGGATGGGAAAATAGAG
GCAGAAGTAAAGCTTACTGGAATTCTCAGTTTAGGGGCCTTGATGCCTGGGGAATCGAGG
AAATATGGCACAACTATTGCCCCTGGTCTGTATGCACCAGTTCATCAGCATTTCTTTGTT
GCCCGTATGGACATGGCTGTTGATTGCAAACCTAATGAAGCTCATAACCAGGTGGTTGAG
GTTAATGTTAAAGTGGAAAGTGCAGGCACACATAATGTGCATAATAATGCTTTCTATGCT
GAAGAGAAGTTGCTCAAATCTGAGTTGCAAGCAATGCGTGATTGCGACCCTTCATCTGCC
CGCCACTGGATTGTACGCAACACACGAACTGTGAATCGGACGGGGCAGCCAACTGGCTAC
AGGCTCGTACCTGGTTCGAACTGCCTGCCTTTGGCTCTGCCTGAGGCGAAATTTCTGAGG
AGGGCTGGGTTCTTGAAGCACAACCTCTGGGTCACTCAATACAAGCGTGGCGAGATGTTC
CCTGGAGGGGAGTTTCCCAACCAGAATCCTCGCATCCATGAGGGTCTGCCAACATGGGTC
AAGAATGATAGGCCTCTGGAGGAAACCGACATTGTTCTCTGGTACGTGTTCGGGCTCACC
CATATCCCCAGGCTAGAAGATTGGCCAGTCATGCCGGTGGAGCACATAGGCTTCATGCTC
ATGCCACATGGATTCTTCAACTGCTCGCCTGCGGTCGACGTGCCTCCCAGCTCGTCCGAT
GCGGATGTCAAGGAAGCCGAGTCGCCCAAGGCCATCCAGAATAGCCTCATATCGAAGCTG
TGA

Peptide Sequence

PEP ID

Zm00001d003309_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:39693129:39700373:1 gene:Zm00001d003309 transcript:Zm00001d003309_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper amine oxidase family protein
Sequence

MAAAKEKASVCCRDAPARVAGAPVVPMRAIAASPVGKVVALAAGGGERVSASAAGSSGAV
IEEIAAVQPTTAKASSKGIPIMTRAQRCHPLDPLSAAEIAVAVATVRVAGRSPEERDSMR
FVEAVLLEPEKNVVALADAYFFPPFQPSLLPRSKGSAVIPSRLPPRRARLVVYNKQSNET
SIWIVELSEVHAATRGGHHRGKVISSEVIPDVQPAMDAMEYAECEATVKSYPPFIEAMKR
RGVDDMDLVMVDAWCAGYYSEADAPSRRLGKPLIFCRTESDSPMENGYARPVEGIHVVVD
MQNNAVIEFEDRKLVPLPPPDHLRNYTPGETRGGVDRSDVKPLIINQPEGPSFRINGYFV
EWQKWNFRIGFTPKEGLVIYSVAYVDGSRGRRPIAHRLSFVEMVVPYGDPSEPHYRKNAF
DAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQD
WRTGLAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALMPGESR
KYGTTIAPGLYAPVHQHFFVARMDMAVDCKPNEAHNQVVEVNVKVESAGTHNVHNNAFYA
EEKLLKSELQAMRDCDPSSARHWIVRNTRTVNRTGQPTGYRLVPGSNCLPLALPEAKFLR
RAGFLKHNLWVTQYKRGEMFPGGEFPNQNPRIHEGLPTWVKNDRPLEETDIVLWYVFGLT
HIPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPSSSDADVKEAESPKAIQNSLISKL

Transcript Sequence

Transcript ID

Zm00001d003309_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:39693129:39700373:1 gene:Zm00001d003309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper amine oxidase family protein
Sequence

CTCCAAATCACTCGACGCAGCAGGCAGCACACAACCCAACACTACTCTCCCTCCCAGTCT
CGCCAACGCCACCACCCCCACCATTCCAAACCCCCGTCTCCCACCGGCTGCCGTTTCCCT
CCCCCCTCCCTCCCTGCCTCCCTCGGCGGCTCCTCGCGGACGGAGAGAACCCCGCTCCCT
TGCCTAGGGTTCCCGGAACCCTAGCCCCGATCCGTACGCGCGAGGGTCCCCGGCGACGAG
GAGGCTGCTGTGAGGGGAGGGGGCAGAAGGCGCGGGAGGCGGAGGCCTGTGCTGTATGTC
AGATCGTGGGAGCCGGCGAGGCGGAGGCGGAGGAGGAGACTACGGACACGGTCAGCTCGC
GAACCCGCTCCAATGGCCGCAGCTAAGGAAAAGGCGTCGGTATGCTGCCGCGATGCGCCC
GCGCGTGTCGCTGGCGCCCCAGTCGTCCCCATGCGCGCGATCGCCGCGTCCCCGGTCGGC
AAGGTCGTCGCCCTCGCCGCGGGAGGCGGTGAGCGCGTTTCTGCGTCGGCTGCTGGCTCA
AGCGGCGCCGTGATCGAGGAGATCGCCGCGGTCCAGCCCACCACCGCGAAGGCATCCTCC
AAAGGGATACCAATAATGACAAGAGCCCAGAGGTGTCACCCTTTGGACCCATTATCTGCT
GCTGAAATTGCAGTTGCTGTAGCAACTGTAAGAGTTGCTGGAAGATCTCCTGAGGAAAGA
GACAGCATGCGCTTTGTTGAAGCTGTGCTGTTGGAGCCAGAAAAGAATGTTGTGGCACTG
GCCGACGCCTACTTCTTTCCACCTTTCCAACCATCACTGCTCCCTAGAAGCAAAGGTTCT
GCTGTTATTCCAAGCAGGCTACCTCCTAGGAGGGCCAGACTTGTTGTCTATAACAAACAA
TCAAATGAGACAAGTATTTGGATAGTGGAACTATCTGAAGTGCATGCCGCTACTAGGGGT
GGACATCACAGAGGGAAGGTGATATCATCTGAAGTTATTCCGGATGTTCAACCTGCCATG
GATGCTATGGAGTATGCTGAATGTGAGGCTACTGTCAAAAGTTATCCTCCATTTATTGAA
GCTATGAAGAGAAGAGGTGTGGATGACATGGATCTTGTTATGGTGGATGCTTGGTGTGCT
GGCTACTACAGCGAAGCTGATGCTCCTAGTCGCAGACTTGGCAAGCCTTTGATATTTTGC
AGAACTGAGAGTGATAGCCCCATGGAGAATGGTTATGCTCGTCCTGTAGAAGGAATCCAT
GTTGTTGTTGATATGCAGAATAATGCTGTGATAGAGTTTGAAGATAGGAAGTTGGTTCCT
CTACCCCCTCCAGATCATTTGAGAAACTATACTCCTGGGGAGACAAGAGGAGGTGTTGAT
CGAAGTGATGTAAAACCACTTATCATCAATCAGCCTGAGGGTCCAAGTTTTCGAATTAAT
GGCTATTTTGTGGAATGGCAGAAGTGGAACTTCCGTATTGGCTTCACCCCCAAAGAGGGT
TTGGTTATCTATTCTGTTGCTTATGTTGATGGTAGCCGTGGACGTAGACCTATAGCACAT
AGGCTGAGCTTTGTTGAGATGGTTGTTCCTTATGGAGATCCAAGTGAACCACATTATCGC
AAGAATGCATTTGATGCTGGAGAAGATGGACTTGGAAAAAATGCTCATTCTCTTAAGAAG
GGATGCGATTGCTTGGGCTACATAAAATATTTTGATGCACATTTCACAAACTTCACTGGT
GGTGTGGAGACAATTGAGAACTGTGTTTGTTTGCATGAGGAGGATCATGGGATCCTTTGG
AAACATCAAGACTGGAGAACTGGTTTAGCAGAAGTAAGGCGGTCAAGGAGGCTCACTGTT
TCATTTATCTGTACAGTTGCAAACTATGAGTATGGTTTTTACTGGCACTTCTATCAGGAT
GGGAAAATAGAGGCAGAAGTAAAGCTTACTGGAATTCTCAGTTTAGGGGCCTTGATGCCT
GGGGAATCGAGGAAATATGGCACAACTATTGCCCCTGGTCTGTATGCACCAGTTCATCAG
CATTTCTTTGTTGCCCGTATGGACATGGCTGTTGATTGCAAACCTAATGAAGCTCATAAC
CAGGTGGTTGAGGTTAATGTTAAAGTGGAAAGTGCAGGCACACATAATGTGCATAATAAT
GCTTTCTATGCTGAAGAGAAGTTGCTCAAATCTGAGTTGCAAGCAATGCGTGATTGCGAC
CCTTCATCTGCCCGCCACTGGATTGTACGCAACACACGAACTGTGAATCGGACGGGGCAG
CCAACTGGCTACAGGCTCGTACCTGGTTCGAACTGCCTGCCTTTGGCTCTGCCTGAGGCG
AAATTTCTGAGGAGGGCTGGGTTCTTGAAGCACAACCTCTGGGTCACTCAATACAAGCGT
GGCGAGATGTTCCCTGGAGGGGAGTTTCCCAACCAGAATCCTCGCATCCATGAGGGTCTG
CCAACATGGGTCAAGAATGATAGGCCTCTGGAGGAAACCGACATTGTTCTCTGGTACGTG
TTCGGGCTCACCCATATCCCCAGGCTAGAAGATTGGCCAGTCATGCCGGTGGAGCACATA
GGCTTCATGCTCATGCCACATGGATTCTTCAACTGCTCGCCTGCGGTCGACGTGCCTCCC
AGCTCGTCCGATGCGGATGTCAAGGAAGCCGAGTCGCCCAAGGCCATCCAGAATAGCCTC
ATATCGAAGCTGTGAGCTTTGCTGTTCTGCCGAGGAAAAAGGATCCGCGCGCGGCTGCTC
TCCCTACTATTTTTTTATCGTATTCCGCGAGTAAAAAGGAAAACTGCTCGATGTCCTTTT
GTTTGTTGCTTGGTAATACCGTTCTGTTTGCTATAATTATCGATCAGCGGGATGTGAAGT
ACTGTTTACATTGCTCGCGTTCTAATAAAGTACTGTTTGGACTTGCTTAACACCACATTG
CAT