Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003308_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:39659891:39663833:-1 gene:Zm00001d003308 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease H2 subunit B
Sequence

ATGTCCTGCGGTAGAGGCAGCACCGGCGAAGTCGAAGGAGGCAAATCGGTCGCCGCGATG
ACGCCGTGGCACGACAGCTTGGCGCCGCCGCCTCGCGTCCTCATTTCCCACCGCCCTTCT
GATGCCAGCGGTCAAGGGATTGTTCTGTCACTTCAACATCCAAGATCAGGAGATGAAGTA
GGGTATCTATTTATTGATGGCCAACTACAAGAGATCAACTGGTTTAAGGAGCGTTATGGT
GCTTGGTTCTTGGGAGATTATGTTTGTGAAGATGGTGGCCTTTATTATTGCACCCCTGTT
GATCCCATCTTCATTTTCCTACCAACTTTTGAAGCTGCACGTATGTCGAACGATAAGGAT
CCAGGAAAATTCAGACAATTGGATGAAATATTGTATGTTGAGGGATATCCTGGTTATCAG
CAGCTAATGAATGTAGCTAACCACCATATGGAATTGGTTTGTGAAGTAAAAGAAGTATCT
AACATGAAGTTCTTTAGGCTGGACAACTCCAAGGTCTTATCTTGGTTGTGCTGCAAGGTA
TACGACCTAAAGGAGGTCTTCCCCAAGTTGGGTAAAAATTATGCCGCCCAAACAGAAAAA
GAAAAATTGAAGGAGGCTGTCCAAATGATCCGTGAATATCTGAAGGACGAACCATGGTTA
GCATTACTATGCAAGAAGCTGCAGCTGGATATCAATGCGATCACTGTTGATGCGACCACC
AAAACTGCTGAAGCTTCGGTTTATGCGGACAGTTGTCCGGCACCTGCCCTCCCCTCTGAG
AGTAAGACTGCGAATGGTGGTGCCAAGTCAAGCAAAGGGAGGCCAGCGAAGAAAGCAAAG
ACAGAGGTAGGATCCAAGAACATCAAAGATATGTTCCGAAGGGTCACGAGGAGTGGATCA
GGATCATGA

Peptide Sequence

PEP ID

Zm00001d003308_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:39659891:39663833:-1 gene:Zm00001d003308 transcript:Zm00001d003308_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease H2 subunit B
Sequence

MSCGRGSTGEVEGGKSVAAMTPWHDSLAPPPRVLISHRPSDASGQGIVLSLQHPRSGDEV
GYLFIDGQLQEINWFKERYGAWFLGDYVCEDGGLYYCTPVDPIFIFLPTFEAARMSNDKD
PGKFRQLDEILYVEGYPGYQQLMNVANHHMELVCEVKEVSNMKFFRLDNSKVLSWLCCKV
YDLKEVFPKLGKNYAAQTEKEKLKEAVQMIREYLKDEPWLALLCKKLQLDINAITVDATT
KTAEASVYADSCPAPALPSESKTANGGAKSSKGRPAKKAKTEVGSKNIKDMFRRVTRSGS
GS

Transcript Sequence

Transcript ID

Zm00001d003308_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:39659891:39663833:-1 gene:Zm00001d003308 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease H2 subunit B
Sequence

GACTTCCCGCGCGCGCGCTCCCGCTCCCGCTGCCGGGCCGGTTTCAGCCCCATCAGGCAA
TCCCCTCTCCCCCTCCGCCCCCCAGCCGAAGCAGACCCAATGTCCTGCGGTAGAGGCAGC
ACCGGCGAAGTCGAAGGAGGCAAATCGGTCGCCGCGATGACGCCGTGGCACGACAGCTTG
GCGCCGCCGCCTCGCGTCCTCATTTCCCACCGCCCTTCTGATGCCAGCGGTCAAGGGATT
GTTCTGTCACTTCAACATCCAAGATCAGGAGATGAAGTAGGGTATCTATTTATTGATGGC
CAACTACAAGAGATCAACTGGTTTAAGGAGCGTTATGGTGCTTGGTTCTTGGGAGATTAT
GTTTGTGAAGATGGTGGCCTTTATTATTGCACCCCTGTTGATCCCATCTTCATTTTCCTA
CCAACTTTTGAAGCTGCACGTATGTCGAACGATAAGGATCCAGGAAAATTCAGACAATTG
GATGAAATATTGTATGTTGAGGGATATCCTGGTTATCAGCAGCTAATGAATGTAGCTAAC
CACCATATGGAATTGGTTTGTGAAGTAAAAGAAGTATCTAACATGAAGTTCTTTAGGCTG
GACAACTCCAAGGTCTTATCTTGGTTGTGCTGCAAGGTATACGACCTAAAGGAGGTCTTC
CCCAAGTTGGGTAAAAATTATGCCGCCCAAACAGAAAAAGAAAAATTGAAGGAGGCTGTC
CAAATGATCCGTGAATATCTGAAGGACGAACCATGGTTAGCATTACTATGCAAGAAGCTG
CAGCTGGATATCAATGCGATCACTGTTGATGCGACCACCAAAACTGCTGAAGCTTCGGTT
TATGCGGACAGTTGTCCGGCACCTGCCCTCCCCTCTGAGAGTAAGACTGCGAATGGTGGT
GCCAAGTCAAGCAAAGGGAGGCCAGCGAAGAAAGCAAAGACAGAGGTAGGATCCAAGAAC
ATCAAAGATATGTTCCGAAGGGTCACGAGGAGTGGATCAGGATCATGATGCCTTCCTGGA
ACTTTCGTGTGACTGACGCCTGTTTTGATGCATTTGGTCCAGCATTCCCTTGTTGAAAAT
CTATGTATCTGAGTTGCTGTGTCTAACAACAGATTGGGATTATATTGTAGCGTTAATTGT
TGATTCAGGCAGTGAACTCTGCTAGTGTACAACCCTCCCTCCCGTCCCGGATGTATTTGT
ACCACAGTTGCTTGTAGTGCCGTTGTCTGCAGTAGTCTATCCAAAGTTTATTAAAAAACA
TCTGTTCTACATTTTAGACTGCACTGTTCGGAGAGTATAAGCTGCTGAAGATGACCTAAG
CGGCTTGTATTGCT