Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003288_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:38813666:38817270:-1 gene:Zm00001d003288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B2
Sequence

ATGTCCAAGCCATGGGGTGGCGTCGGCGCGTGGGCGCTGGATGCCGAGCGCGCCGAGGAG
GAGGAGCGCGAGCAGGTCCTGGCCTTCCCGGCGCCCGAGCCACCCGCGGCCGCGGGCGGC
GCCGCCAGCTTCCCGAGCCTCCGCGAGGCGGCCTCTGCTGGCGGCAAGGGCAAATCGAAG
AAGAAGAACAAGGGCACCACGCTGTCCCTGTCCGAGTTCACCACCTTCGGCGCGGCCGCG
GCCCAGCGGCGCGCGGCGCCCGTCGAGCCCAAGGGCCTGACCCACGAGGAGATGATGCTG
CTGCCCACGGGCCCCCGGGAACGCTCGGCCGAGGAGCTGGACCGCTCTCGCGGGTTCCGC
TCCTACGGCGGCGGCGGCGGCGGCGGCTTCGGCGCAGGCGCTGGAGGGGAGCGCCGCGGC
GGGTTCGACGACGAGGGCCGCCGCGGGCCGGGCAGAAGCTCCGATCTTGACATGACATCC
CGAGCGGACGAGGCTGACGACTGGGGCGCCACTAAGAAGTTCACCCCGGCTCCCGCCGAC
TCCGGCCGCCGCGATAGGTTCGGTGGGCCTTCCCCTCTCGGCCGCGCTGATGATATTGAC
GACTGGTCACGCGACAAGAAGCCGCTCCCGTCGCGCTACCCCAGCCTTGGTTCTGCAGGT
GGCTTCCGTGACTCGCCGGGCTTCCGCGACTCATCAGCTTCTTCTGACGCTGACCGTTGG
GTCCGTGGAGCCACCCCTATGCCACACAACGGCCAGGGGGCGGGGGAGAGGCCACGCATC
GTCCTTAATCCACCTAAACGTGACCCGTCAACTGCCTCTACCCCACCTGCTGAGGTGGCT
CGCAACCGGCCAAGCCCTTTTGGGGCTGCAAGGCCCCGGGAGGATGTGCTGGCTGAGAAG
GGGGTGGATTGGAAGAAGTTTGAGAATGAGATTGACCAGAAGACCAGCCGCCCTACCAGT
TCGCACTCCAGCAGGCCGAATAGTGCTCATTCCTCCCGCCCTGGCAGCCCTGGGTCACAG
GTTTCGGCCGTTGGGAGCGAAGGAGCACCAAGGGCACGGCCAAAGGTTAACCCATTTGGT
GATGCCAAGCCAAGAGAAGTGGTGTTGCAGGAGAAAGGGAAAGACTGGAGGAAAATTGAT
GTTGAGCTGGAGCATCGTGCTATAAATAGATTGGTAGCACATCCATTTGATCTCACTCCA
TGTAAGTGGGTCAACACTAAGGTAATCAATGCTTTAGTGAATTTTATTCTTGATATACTT
GTCATAATGCCGGAGTCTGATGAAGAAAGAAATTTGAAAGAAGAAATCAACCTCCTGAAG
GTGGATCTTAAAGAAATCGAGGGAAAGATGAGTAATGGTTCTGAGCAGACATCGGTAGAT
GCAAAAGATTTGTCTGAGAAGATATCTATGTTGGAAAGCCAGCTTGAGCAGCTTTCAAGG
GAGTTGGATGACAAGATTCGATTTGGGCAAAGGCCACGTTCTGGTGCAGGCAGGGTTACA
ACACTTGCACCCACTAGTTTAGGGGAGGAACCACAGGCTACAGTGGTGGACAGACCACGT
TCTCGTGGTGGTATGGAACCACCCCCAAGGCAGGAAGAAAGATGGGGATTTCAAGGAAGC
CGAGAAAGGGGCTCGTTTGGTGGAAGCAGAAATTCAGACAGGTTTGTGTAA

Peptide Sequence

PEP ID

Zm00001d003288_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:38813666:38817270:-1 gene:Zm00001d003288 transcript:Zm00001d003288_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B2
Sequence

MSKPWGGVGAWALDAERAEEEEREQVLAFPAPEPPAAAGGAASFPSLREAASAGGKGKSK
KKNKGTTLSLSEFTTFGAAAAQRRAAPVEPKGLTHEEMMLLPTGPRERSAEELDRSRGFR
SYGGGGGGGFGAGAGGERRGGFDDEGRRGPGRSSDLDMTSRADEADDWGATKKFTPAPAD
SGRRDRFGGPSPLGRADDIDDWSRDKKPLPSRYPSLGSAGGFRDSPGFRDSSASSDADRW
VRGATPMPHNGQGAGERPRIVLNPPKRDPSTASTPPAEVARNRPSPFGAARPREDVLAEK
GVDWKKFENEIDQKTSRPTSSHSSRPNSAHSSRPGSPGSQVSAVGSEGAPRARPKVNPFG
DAKPREVVLQEKGKDWRKIDVELEHRAINRLVAHPFDLTPCKWVNTKVINALVNFILDIL
VIMPESDEERNLKEEINLLKVDLKEIEGKMSNGSEQTSVDAKDLSEKISMLESQLEQLSR
ELDDKIRFGQRPRSGAGRVTTLAPTSLGEEPQATVVDRPRSRGGMEPPPRQEERWGFQGS
RERGSFGGSRNSDRFV

Transcript Sequence

Transcript ID

Zm00001d003288_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:38813666:38817270:-1 gene:Zm00001d003288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B2
Sequence

AACAAGACCCCCCTGCCTCGCCTCGATTCCACCCACACCCACATCCTCACCTCCCTCCGC
CTCCGAGTGCCACCAAACCCTAGATCTCGCACCGGCGGCAGCCATGTCCAAGCCATGGGG
TGGCGTCGGCGCGTGGGCGCTGGATGCCGAGCGCGCCGAGGAGGAGGAGCGCGAGCAGGT
CCTGGCCTTCCCGGCGCCCGAGCCACCCGCGGCCGCGGGCGGCGCCGCCAGCTTCCCGAG
CCTCCGCGAGGCGGCCTCTGCTGGCGGCAAGGGCAAATCGAAGAAGAAGAACAAGGGCAC
CACGCTGTCCCTGTCCGAGTTCACCACCTTCGGCGCGGCCGCGGCCCAGCGGCGCGCGGC
GCCCGTCGAGCCCAAGGGCCTGACCCACGAGGAGATGATGCTGCTGCCCACGGGCCCCCG
GGAACGCTCGGCCGAGGAGCTGGACCGCTCTCGCGGGTTCCGCTCCTACGGCGGCGGCGG
CGGCGGCGGCTTCGGCGCAGGCGCTGGAGGGGAGCGCCGCGGCGGGTTCGACGACGAGGG
CCGCCGCGGGCCGGGCAGAAGCTCCGATCTTGACATGACATCCCGAGCGGACGAGGCTGA
CGACTGGGGCGCCACTAAGAAGTTCACCCCGGCTCCCGCCGACTCCGGCCGCCGCGATAG
GTTCGGTGGGCCTTCCCCTCTCGGCCGCGCTGATGATATTGACGACTGGTCACGCGACAA
GAAGCCGCTCCCGTCGCGCTACCCCAGCCTTGGTTCTGCAGGTGGCTTCCGTGACTCGCC
GGGCTTCCGCGACTCATCAGCTTCTTCTGACGCTGACCGTTGGGTCCGTGGAGCCACCCC
TATGCCACACAACGGCCAGGGGGCGGGGGAGAGGCCACGCATCGTCCTTAATCCACCTAA
ACGTGACCCGTCAACTGCCTCTACCCCACCTGCTGAGGTGGCTCGCAACCGGCCAAGCCC
TTTTGGGGCTGCAAGGCCCCGGGAGGATGTGCTGGCTGAGAAGGGGGTGGATTGGAAGAA
GTTTGAGAATGAGATTGACCAGAAGACCAGCCGCCCTACCAGTTCGCACTCCAGCAGGCC
GAATAGTGCTCATTCCTCCCGCCCTGGCAGCCCTGGGTCACAGGTTTCGGCCGTTGGGAG
CGAAGGAGCACCAAGGGCACGGCCAAAGGTTAACCCATTTGGTGATGCCAAGCCAAGAGA
AGTGGTGTTGCAGGAGAAAGGGAAAGACTGGAGGAAAATTGATGTTGAGCTGGAGCATCG
TGCTATAAATAGATTGGTAGCACATCCATTTGATCTCACTCCATGTAAGTGGGTCAACAC
TAAGGTAATCAATGCTTTAGTGAATTTTATTCTTGATATACTTGTCATAATGCCGGAGTC
TGATGAAGAAAGAAATTTGAAAGAAGAAATCAACCTCCTGAAGGTGGATCTTAAAGAAAT
CGAGGGAAAGATGAGTAATGGTTCTGAGCAGACATCGGTAGATGCAAAAGATTTGTCTGA
GAAGATATCTATGTTGGAAAGCCAGCTTGAGCAGCTTTCAAGGGAGTTGGATGACAAGAT
TCGATTTGGGCAAAGGCCACGTTCTGGTGCAGGCAGGGTTACAACACTTGCACCCACTAG
TTTAGGGGAGGAACCACAGGCTACAGTGGTGGACAGACCACGTTCTCGTGGTGGTATGGA
ACCACCCCCAAGGCAGGAAGAAAGATGGGGATTTCAAGGAAGCCGAGAAAGGGGCTCGTT
TGGTGGAAGCAGAAATTCAGACAGGTTTGTGTAA