Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003284_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:38751838:38756080:-1 gene:Zm00001d003284 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 93 description:SWI/SNF complex subunit SWI3A
Sequence

ATGGGAGATGAAAAACATATATTTTCCTTTGGACCAGATGACAAGGATGGTTTTAAAGTA
TGTTCAAAATGTTCCAAAAGCAATAATGATAATATCAAGGAAGAGGCGAATAAATGTCCT
GGTGACAAAAAAGAGAATATGGAAAATCATGCTTCCAGTGCATGGACAGACACTGAGACG
TTACTCCTTTTAGAAGGAGTCCTAAAACATGGAGATGATTGGGATCTTATCGCTCAGCAT
GTCCGCACAAAGAATAAATCAGAATGCATAGCAATGCTTATTCAATTACCTTTTGGCGAA
CATATGCTGGGCACAATAAATGGTAAATTCGTTAGCAGGCTCCACATAAACCAGACAGAT
GATGGAAAAACGAACCAGCACATTATGGAGTCTTCAAGTCACTCAACCGAAATGGCTGAT
GGCATGCAGATTGATGGAAGTGAAGATAGTGCTGATAAATCAGTTGAAGAATATCCTACA
AAACGCAGACGATTGTTTTTTTCAATGGATGCTACCACTTCATTGATGGAGCAGTTAGCT
ATCCTGACCACAGCAGCTAGCCCAGATGTTGCTGCTGCTGCTGCTGATGCCGCAATTAAA
GCATTTGGCAATGAAAACCCGCAAGCAAGGAAAGCCTTTCGCCTCAACGAGCAAGAATAT
AAGACTAAGGCTTTTGCTTCTAATCATGTCCAACAGATTGACCACAAAGTTAGCAATAAG
GATACGGCGATGCATGGCCAGAGTGGTTCTGATAAGCAGGAAAAGAAGTTCATTGCTAGC
GCATATCAATTGAGGGCAGCTGTTGCTACTGCTGTTGGTGTAGCTGCTGCCCGTGCTAAA
ATGCTTGCAGACCAGGAGGAGCGAGAAATGGAGCTCCTAATGGCGTCTGTAATTGAAACT
CAGCTAAGAAAGATGCAATACAAGATCAAACACTTTGAGGAGCTAGATTCACTCATGGAT
CAAGAGTACACCGCTATACAGCAAATGAAGGGATCCCTCATGAATGAATGGATAAAGGTC
CTTGAGCATGCATTCCGGGCTGGAGTGTCTCTACCGAGAGATGAATTGCTCACCAAACTG
TTGCTGAACTAG

Peptide Sequence

PEP ID

Zm00001d003284_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:38751838:38756080:-1 gene:Zm00001d003284 transcript:Zm00001d003284_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 93 description:SWI/SNF complex subunit SWI3A
Sequence

MGDEKHIFSFGPDDKDGFKVCSKCSKSNNDNIKEEANKCPGDKKENMENHASSAWTDTET
LLLLEGVLKHGDDWDLIAQHVRTKNKSECIAMLIQLPFGEHMLGTINGKFVSRLHINQTD
DGKTNQHIMESSSHSTEMADGMQIDGSEDSADKSVEEYPTKRRRLFFSMDATTSLMEQLA
ILTTAASPDVAAAAADAAIKAFGNENPQARKAFRLNEQEYKTKAFASNHVQQIDHKVSNK
DTAMHGQSGSDKQEKKFIASAYQLRAAVATAVGVAAARAKMLADQEEREMELLMASVIET
QLRKMQYKIKHFEELDSLMDQEYTAIQQMKGSLMNEWIKVLEHAFRAGVSLPRDELLTKL
LLN

Transcript Sequence

Transcript ID

Zm00001d003284_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:38751838:38756080:-1 gene:Zm00001d003284 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 93 description:SWI/SNF complex subunit SWI3A
Sequence

CCAGATCTTTCGTCTCTGCCTCTCCCCGTCTGACCCCATCTTCCCGTCCCCCCGCCATGT
CGCCGCCGGCTGCCGGCGCGGCCGCCAACTCCGGCGACGGGACGCCTCCGTCGCCGCGCG
AGCTCTACACCATCCCGGCATCATCCGGTTGGTTCCGGTGGGACGGGATCCACGAGACGG
AGCGGCGGGCGCTGCCGGAGTTCTTCGGAGGGGCAGGCGGCGCTGGGTTCGGGACGGCGA
CGCGGAACCCGCGGATCTACCGCGAGTACCGCGACTTCATCATCGCCAAATACCGGGAGG
ACCCGGCGCGCCGCCTCACTTTCACCGAGGTCCGCAGGGCGCTTGTCGGGGACGTCACGC
TCCTCCGGAAGCTCTTTGCCTTCCTCGACTCCTCCGGCCTCATCAACTTCTCGGCCTCCT
CGTCCTCGGTCCCCGCGTCGCGGCAGCAGGAGGTGGGGGTCGTCGTGGAGGCGCCCGTGG
GTCTGCAGGTGACGCCGCGTCCTCCAGCGTCCTACTTCGCCGAAGAGAAGCGTGTAGCGG
CGGGCGGGGAGAAGGAGAACGAATTCCGGTTGCCGCCGCTGACCTCCTACAGTGATGTGT
TCGGGGAATGGGCACCTGGGAAGGCGCCTATATGCGGTTTTTGCGGTGAGGAGTGCAATG
GTGCGGATGTTGAGACGCTGCAGGTACTATGAAAGCTCCAAAAAAGGTTTTCCCCCCATG
ACATTGTTGTTTTTTCAGTAGTTTTGGGTTTAGGACTATGTAGTGGTGCTAAAACCTAAA
AGGTAGAATGTGGAATATGCAGTGCCTAAAAGCTACAGCTCAAATGAAAGCAAGTCATAG
TATCTAGGGTATATGTTCATGGACATTTCCAGCATGCTTGAGAAATACTGCAAACTTGTG
TAGGTCGTTTTGAACTGATATATCCATTTTTGTCAAAACAGGTAACATAGAGTAAGCTCC
AAGAAAATGAAAGATGGGGCAAATAATAACTGGTGCTACTGTAGTACTGTATATTACTCC
CTCCGTTCTTTTTTATTTGTCGCGTTTTAGTTAAAAAATGAACTGACGGTGGACAAATAT
TCGAGAACAGAGGTAGTATTAAGGGGGTGTTTGGTTTCTAGGGACTAATTTTTAGTCCTT
TTTAGTCCCTAAATTACTCTTTTAGTCCCTGTGTTTGGCAATTTGGGGGACTAAAGAGAC
TAAAATAGAGGGACTGAAAATTAGTCCCTGAAAACCAAACATCCCCTAAGAGCATCTCCA
AGGACTCTTTATTTTTGACTCTCTATTTACCTCTTTATAAAGATTAAACTCTATATGTAG
TATCTCATTCTAACAGACTCTCCAACATGCAAGTTTGTTTGGATAGCCGAAGTGGCTAGC
CAAGTTTGGATAGTGAGGCGGATATCTTGGCGAGTTGAATGGCTAGTCTGTTTGAGTTAT
TTTGCTATTAAGTAGCCAAAATTTGGTTTGATGAGTCATTTAGCTAGTCTCTTGGAAATG
TTTGCTATGTAAATGTCTAGTCCCTAGGATTAGAGTATTTTGAAACTTAAAATTTTCATT
TGGTAACATTCGAGAATTCACTCATTAGTATGTTCTGTAGATAATAATTGCCATGGGAGA
TGAAAAACATATATTTTCCTTTGGACCAGATGACAAGGATGGTTTTAAAGTATGTTCAAA
ATGTTCCAAAAGCAATAATGATAATATCAAGGAAGAGGCGAATAAATGTCCTGGTGACAA
AAAAGAGAATATGGAAAATCATGCTTCCAGTGCATGGACAGACACTGAGACGTTACTCCT
TTTAGAAGGAGTCCTAAAACATGGAGATGATTGGGATCTTATCGCTCAGCATGTCCGCAC
AAAGAATAAATCAGAATGCATAGCAATGCTTATTCAATTACCTTTTGGCGAACATATGCT
GGGCACAATAAATGGTAAATTCGTTAGCAGGCTCCACATAAACCAGACAGATGATGGAAA
AACGAACCAGCACATTATGGAGTCTTCAAGTCACTCAACCGAAATGGCTGATGGCATGCA
GATTGATGGAAGTGAAGATAGTGCTGATAAATCAGTTGAAGAATATCCTACAAAACGCAG
ACGATTGTTTTTTTCAATGGATGCTACCACTTCATTGATGGAGCAGTTAGCTATCCTGAC
CACAGCAGCTAGCCCAGATGTTGCTGCTGCTGCTGCTGATGCCGCAATTAAAGCATTTGG
CAATGAAAACCCGCAAGCAAGGAAAGCCTTTCGCCTCAACGAGCAAGAATATAAGACTAA
GGCTTTTGCTTCTAATCATGTCCAACAGATTGACCACAAAGTTAGCAATAAGGATACGGC
GATGCATGGCCAGAGTGGTTCTGATAAGCAGGAAAAGAAGTTCATTGCTAGCGCATATCA
ATTGAGGGCAGCTGTTGCTACTGCTGTTGGTGTAGCTGCTGCCCGTGCTAAAATGCTTGC
AGACCAGGAGGAGCGAGAAATGGAGCTCCTAATGGCGTCTGTAATTGAAACTCAGCTAAG
AAAGATGCAATACAAGATCAAACACTTTGAGGAGCTAGATTCACTCATGGATCAAGAGTA
CACCGCTATACAGCAAATGAAGGGATCCCTCATGAATGAATGGATAAAGGTCCTTGAGCA
TGCATTCCGGGCTGGAGTGTCTCTACCGAGAGATGAATTGCTCACCAAACTGTTGCTGAA
CTAGCCGCCCATCCCATGAGGACCTGGCTGTAGTCGAGTAGTTCTCTGATATGCGTCACC
CCCTTGACTGTTGCTGGTAGATAGCTTCCTGCGTGGGTGCGTCTGTAAAGGTGCCGATTG
TGCTTTCGATTTCTCAGAATTTTGGGGATCAGAACAACCCTTCGTAACTCTTTGCCCTGT
TGTACCAAACTAGGTTAGATGGCAAAATTGC