Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003265_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:38342940:38347317:1 gene:Zm00001d003265 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase-like protein

Sequence

ATGGCGGCGGAGGAGGGGGCCATGTCGCCGACGAGGATGCTTGCGGAGGGGCACCTGCGG
GTGGCCACCGGCGGGGGCGCGCCGGCGGACGGCGGGATCGCCGTCAGACACCTCCCGCAC
CATCACCCCACTAAGAAAGACAATGTTGGTGGGAAAACTGAAAAAGACAATCATGAAGGT
GTAAATTCTTTACTATCTGAGGAGTTGGAAAAACTAGCTAATGGGAATAGCAAGATTCCT
GGTACATTAGATGAGTATAGAAAGCTTGTCGTTCCAATAATTGAGGAGTATTTTAGTACA
GGAGATGTGGAATTGGCAGCTTCTGAGCTGAAGTGTCTTGGATCTGATCAGTTTCATCAT
TACTTTGTGAAGAAGCTTATATCTATGGCAATGGATCGCCATGACAAAGAAAAAGAAATG
GCATCGATTCTGTTATCATCTTTGTATGCTGATCTACTGAGCTCCTACAGGATCAGTGAA
GGTTTTATGATGCTTCTGGAGTCTACAGAAGATCTAACTGTTGATATACCGGATGCTACT
GATGTATTGGCAGTTTTTATTGCACGGGCTATTGTTGATGAAATTTTGCCTCCTGTTTTC
CTCACTCGAGCTAGGGCACTACTTCCAGAATTTTCCAAGGGCATTCAAGTTCTGCAGGTT
GTTGAAAAGAGCTATTTGTCAGCTCCCCACCATGCAGAATTAGTTGAACGCAAATGGGGT
GGAAGCACACACTCTACTGTAGAAGAAGCAAAAAGTAAGATTAAGAATATTCTAAGAGAA
TATATTGAGAATGAAGACATAGATGAAGCCTTTAGGTGTATAAGAGAGCTCAGCCTTCCA
TTTTTCCATCATGAGGTTGTGAAGCGTGCTCTCACCTTTGGTATAGAGAACGTATCCTCG
CAACCATCAATCCTTAAGTTATTGAAGGAGGCAGCTGCAAGTTGCTTGATCAGTCCTAAT
CAAATCTCAAAGGGTTTTTCTAGACTAGCTGAGGGTGTTGACGACTTGAGTCTTGATATT
CCTTCTGCTAAAGTTCTTTTTGACAAGCTGGTTTCAACAGCTATATCTGAAGGATGGCTT
GATGCTTCTTTTGGTAAATCAGCTGCCCCTGATGAAGAGATACAAAGTACAAGCGTTGTA
AAGGTGAAGCGTTTTAAAGAAGAATGTGGCCACATAATTCATGAGTATTTTCTCTCAGAT
GATGTCCCAGAACTTATTCGAAGCCTTGAAGAGCTTTCTGCTCCAGAATTCAATCCCATT
TTCCTCAAGAAGCTTGTGACGCTTGCTATGGATAGAAAGAGCAGAGAGAAGGAGATGGCC
TCAGTACTCCTTTCTTCATTGAGATTAGAATTGTTTTCAACTGATGACATCATTGAGGGT
TTTGTAATGCTCTTGCAGTCAGCAGAAGACACTGCACTCGACATTGTGGATGCTCCTAGT
GAACTTGCTCTCTTCCTAGCTAGGGCAGTGATTGATGAAGTATTAATTCCGCTCAATTTG
GATGAAATCAGCATTAAGCTTCGGCCGAACAGCAGTGGCAGCCAAACTGTCCAGATGGCG
CGTGCTCTACTGTCAGCTCGCCATTCTGGTGAGCGGATACTGCGGTGCTGGGGCGGTGGC
ACTGGATGGGCTGTGGAAGATACTAAGGACAAGATCACTAAGCTATTGGAGGAATACAAC
ACTGGTGGTGACCTAGGAGAAGCCTGCAGATGCATCCGTGATCTTGGGATGCCCTTCTTC
AACCATGAGGTGGTAAAGAAGGCACTGGTCATGGCGATGGAGAAGCAGAATGACACCAGC
ATCTTGGTCCTGCTGCAGGAGTGTTTCGGCGAGGGGCTCATAACCATCAACCAGATGACC
AAAGGCTTTGCCCGTGTCAAGGAAGGCCTTGATGATCTGATCCTCGACATCCCAAATGCC
CAGGAGAAGTTTGGAGAGTATGTGGAGCTGGCAACAGAGCGCGGCTGGCTGCTGCCGACC
TTCGCCTCCGTTCCCTGA

Peptide Sequence

PEP ID

Zm00001d003265_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:38342940:38347317:1 gene:Zm00001d003265 transcript:Zm00001d003265_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase-like protein

Sequence

MAAEEGAMSPTRMLAEGHLRVATGGGAPADGGIAVRHLPHHHPTKKDNVGGKTEKDNHEG
VNSLLSEELEKLANGNSKIPGTLDEYRKLVVPIIEEYFSTGDVELAASELKCLGSDQFHH
YFVKKLISMAMDRHDKEKEMASILLSSLYADLLSSYRISEGFMMLLESTEDLTVDIPDAT
DVLAVFIARAIVDEILPPVFLTRARALLPEFSKGIQVLQVVEKSYLSAPHHAELVERKWG
GSTHSTVEEAKSKIKNILREYIENEDIDEAFRCIRELSLPFFHHEVVKRALTFGIENVSS
QPSILKLLKEAAASCLISPNQISKGFSRLAEGVDDLSLDIPSAKVLFDKLVSTAISEGWL
DASFGKSAAPDEEIQSTSVVKVKRFKEECGHIIHEYFLSDDVPELIRSLEELSAPEFNPI
FLKKLVTLAMDRKSREKEMASVLLSSLRLELFSTDDIIEGFVMLLQSAEDTALDIVDAPS
ELALFLARAVIDEVLIPLNLDEISIKLRPNSSGSQTVQMARALLSARHSGERILRCWGGG
TGWAVEDTKDKITKLLEEYNTGGDLGEACRCIRDLGMPFFNHEVVKKALVMAMEKQNDTS
ILVLLQECFGEGLITINQMTKGFARVKEGLDDLILDIPNAQEKFGEYVELATERGWLLPT
FASVP

Transcript Sequence

Transcript ID

Zm00001d003265_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:38342940:38347317:1 gene:Zm00001d003265 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase-like protein

Sequence

ACTCGCTCGCAACTCGCCGCGCGGCGGAAACGCCACGCCCGGGGTGAGATCCGCGCGGGC
CCTCGCCTGCCTCGTCACCGTCCCGCGGCCTCCGATCTCCACAGGTGCGACCGACGCCGG
CTCATCTCGAATCGTCCGGGGGTCGTCGCTTTCGGATTTGATTTCGCTCGCTCAATCCTG
TTGGTGGTGTAGGGCGGCCGGAGGAGTCGGAGGGGCAGAGTGAGATGGCGGCGGAGGAGG
GGGCCATGTCGCCGACGAGGATGCTTGCGGAGGGGCACCTGCGGGTGGCCACCGGCGGGG
GCGCGCCGGCGGACGGCGGGATCGCCGTCAGACACCTCCCGCACCATCACCCCACTAAGA
AAGACAATGTTGGTGGGAAAACTGAAAAAGACAATCATGAAGGTGTAAATTCTTTACTAT
CTGAGGAGTTGGAAAAACTAGCTAATGGGAATAGCAAGATTCCTGGTACATTAGATGAGT
ATAGAAAGCTTGTCGTTCCAATAATTGAGGAGTATTTTAGTACAGGAGATGTGGAATTGG
CAGCTTCTGAGCTGAAGTGTCTTGGATCTGATCAGTTTCATCATTACTTTGTGAAGAAGC
TTATATCTATGGCAATGGATCGCCATGACAAAGAAAAAGAAATGGCATCGATTCTGTTAT
CATCTTTGTATGCTGATCTACTGAGCTCCTACAGGATCAGTGAAGGTTTTATGATGCTTC
TGGAGTCTACAGAAGATCTAACTGTTGATATACCGGATGCTACTGATGTATTGGCAGTTT
TTATTGCACGGGCTATTGTTGATGAAATTTTGCCTCCTGTTTTCCTCACTCGAGCTAGGG
CACTACTTCCAGAATTTTCCAAGGGCATTCAAGTTCTGCAGGTTGTTGAAAAGAGCTATT
TGTCAGCTCCCCACCATGCAGAATTAGTTGAACGCAAATGGGGTGGAAGCACACACTCTA
CTGTAGAAGAAGCAAAAAGTAAGATTAAGAATATTCTAAGAGAATATATTGAGAATGAAG
ACATAGATGAAGCCTTTAGGTGTATAAGAGAGCTCAGCCTTCCATTTTTCCATCATGAGG
TTGTGAAGCGTGCTCTCACCTTTGGTATAGAGAACGTATCCTCGCAACCATCAATCCTTA
AGTTATTGAAGGAGGCAGCTGCAAGTTGCTTGATCAGTCCTAATCAAATCTCAAAGGGTT
TTTCTAGACTAGCTGAGGGTGTTGACGACTTGAGTCTTGATATTCCTTCTGCTAAAGTTC
TTTTTGACAAGCTGGTTTCAACAGCTATATCTGAAGGATGGCTTGATGCTTCTTTTGGTA
AATCAGCTGCCCCTGATGAAGAGATACAAAGTACAAGCGTTGTAAAGGTGAAGCGTTTTA
AAGAAGAATGTGGCCACATAATTCATGAGTATTTTCTCTCAGATGATGTCCCAGAACTTA
TTCGAAGCCTTGAAGAGCTTTCTGCTCCAGAATTCAATCCCATTTTCCTCAAGAAGCTTG
TGACGCTTGCTATGGATAGAAAGAGCAGAGAGAAGGAGATGGCCTCAGTACTCCTTTCTT
CATTGAGATTAGAATTGTTTTCAACTGATGACATCATTGAGGGTTTTGTAATGCTCTTGC
AGTCAGCAGAAGACACTGCACTCGACATTGTGGATGCTCCTAGTGAACTTGCTCTCTTCC
TAGCTAGGGCAGTGATTGATGAAGTATTAATTCCGCTCAATTTGGATGAAATCAGCATTA
AGCTTCGGCCGAACAGCAGTGGCAGCCAAACTGTCCAGATGGCGCGTGCTCTACTGTCAG
CTCGCCATTCTGGTGAGCGGATACTGCGGTGCTGGGGCGGTGGCACTGGATGGGCTGTGG
AAGATACTAAGGACAAGATCACTAAGCTATTGGAGGAATACAACACTGGTGGTGACCTAG
GAGAAGCCTGCAGATGCATCCGTGATCTTGGGATGCCCTTCTTCAACCATGAGGTGGTAA
AGAAGGCACTGGTCATGGCGATGGAGAAGCAGAATGACACCAGCATCTTGGTCCTGCTGC
AGGAGTGTTTCGGCGAGGGGCTCATAACCATCAACCAGATGACCAAAGGCTTTGCCCGTG
TCAAGGAAGGCCTTGATGATCTGATCCTCGACATCCCAAATGCCCAGGAGAAGTTTGGAG
AGTATGTGGAGCTGGCAACAGAGCGCGGCTGGCTGCTGCCGACCTTCGCCTCCGTTCCCT
GAGCATCCACCACTGGCGATACCTTCCTTATGTGTACATTTGTGCCCATGATGTCATTAG
CTCCGTACCAAAGTTTTCCTATTCCTAGTTTACTTATGTTACCGTATACTGGAGGATTGT
AGGATGGATGTGGTGTCGGTTGTTGAGATAGTGTCCTATTGGTCTAGTCTGGGAGGGTAC
TTTTGAGAGTTAAAAGAATAAAGCCATTTCGTTTCAGG