Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003247_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:37815902:37818424:1 gene:Zm00001d003247 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate synthase1 description: malate synthase1
Sequence	ATGGCCGCAAGCACAGCGGCGCCATGCTACGACGCGCCCGAGGGCGTGGACGTCCGCGGG CGGTACGACCGGGAGTTCGCGGGCATCCTCACCCGCGACGCGCTGGACTTCGTGGCCGGC CTGCAGCGCGAGTTCCGCGCCGCCGTCCGCTACGCCATGGAGCAGCGGCGGGAGGCCCAG CGCCGGTACGACGCCGGCGAGCTGCCGCGGTTCGACCCGGCCACGACGCTCGTGCGCGAG GGGGACTGGACGTGCGCGCCCGTGCCGCCGGCCGTCGCGGACCGCACCGTGGAGATCACG GGCCCCGCCGAGCCGCGGAAGATGGTCATCAACGCGCTCAACTCCGGCGCCAAGGTCTTC ATGGCTGACTTCGAGGACGCGCTGTCGCCGACGTGGGAGAACCTGATGCACGGGCAGGTG AACCTGCGGGACGCCGTGGCTGGCACCATCAGCTTCCGCGACGCGGCGCGCGGGCGGACG TACGAGCTCAACGACCGAACCGCCAAGCTCTTCGTCCGGCCCCGCGGCTGGCACCTCCCC GAGGCGCACATCCTCATCGACGGCGAGCCGGCCATTGGCTGCCTCGTCGACTTCGGCCTC TACTTCTTCCACAACCACGCTGCCTTCCGCGCAGGCCAGGGCGCCGGCTTCGGGCCGTTC TTTTACCTGCCCAAGATGGAGCACTCCAGGGAAGCGAGGATATGGAACGGGGTGTTCCAG AGAGCGGAGAAAGCTGCTGGGATCGAGCTCGGGAGCATCCGGGCAACGGTGCTGGTGGAG ACGTTGCCAGCGGTGTTCCAAATGAACGAGATCCTGCACGAGCTGCGCGAGCACTCGGCG GGGCTCAACTGCGGCCGCTGGGACTACATCTTCAGCTACGTCAAGACGTTCCGCGCCCAC CCGGACCGCCTCCTCCCCGACCGCGCCCTCGTCGGCATGGCCCAGCACTTCATGCGCTCC TACTCCCACCTCCTCATCCACACCTGCCACCGTCGCGGAGTCCACGCCATGGGCGGCATG GCGGCTCAGATCCCGATCAAGGACGATGCGGCGGCGAACGAGGCGGCACTGGAGCTGGTG CGCAAGGACAAGCTGAGGGAGGTGCGCGCGGGCCACGACGGCACGTGGGCGGCGCACCCG GGGCTCATCCCGGCGATACGGGAGGTCTTCGAGGGCCACCTCGGCGGGAGGCCGAACCAG ATCGGCGACGCCGCAGGGCACGAGGGTGCCAGCGTCAACGAGGAGGACCTCATCCAGCCG CCGCGGGGCGCGCGCACTGTGGACGGTCTGCGGCTCAACGTCCGCGTGGGCGTGCAGTAC CTCGCGGCGTGGCTGGCCGGCTCCGGCTCCGTCCCGCTGTACAACCTGATGGAGGACGCG GCTACGGCGGAGATCAGCCGCGTCCAGAACTGGCAGTGGCTGCGCCACGGAGCGGCGCTG GACGCCGGCGGTGTGGAGGTGCGCGCGACGCCAGAGCTACTCGCACGCGTCGTCGAGGAG GAGATGGCGAGGGTCGAGGCAGAGGTCGGCCCCGACAGGTTCCGAAAGGGGCGGTACGCG GAGGCGGGCAGGATCTTCAGCCGGCAGTGCACCGCGCCGGAGCTGGACGACTTCCTCACG CTGGACGCGTACAACCTCATCGTGGCGCACCATCCAGGTGCGTCACCGTGCAAGCTCTGA

Peptide Sequence

PEP ID	Zm00001d003247_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:37815902:37818424:1 gene:Zm00001d003247 transcript:Zm00001d003247_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate synthase1 description: malate synthase1
Sequence	MAASTAAPCYDAPEGVDVRGRYDREFAGILTRDALDFVAGLQREFRAAVRYAMEQRREAQ RRYDAGELPRFDPATTLVREGDWTCAPVPPAVADRTVEITGPAEPRKMVINALNSGAKVF MADFEDALSPTWENLMHGQVNLRDAVAGTISFRDAARGRTYELNDRTAKLFVRPRGWHLP EAHILIDGEPAIGCLVDFGLYFFHNHAAFRAGQGAGFGPFFYLPKMEHSREARIWNGVFQ RAEKAAGIELGSIRATVLVETLPAVFQMNEILHELREHSAGLNCGRWDYIFSYVKTFRAH PDRLLPDRALVGMAQHFMRSYSHLLIHTCHRRGVHAMGGMAAQIPIKDDAAANEAALELV RKDKLREVRAGHDGTWAAHPGLIPAIREVFEGHLGGRPNQIGDAAGHEGASVNEEDLIQP PRGARTVDGLRLNVRVGVQYLAAWLAGSGSVPLYNLMEDAATAEISRVQNWQWLRHGAAL DAGGVEVRATPELLARVVEEEMARVEAEVGPDRFRKGRYAEAGRIFSRQCTAPELDDFLT LDAYNLIVAHHPGASPCKL

Transcript Sequence

Transcript ID	Zm00001d003247_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:37815902:37818424:1 gene:Zm00001d003247 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate synthase1 description: malate synthase1
Sequence	ACGCGCACTTCGAGTTGTACAGGAGCTGCACTGCACGCTCCTCAAATTCCCACGCCGCAT CGCCACCCAGTGCCCTGCTCACCGCCGAACGGTTTCAATGGCCGCAAGCACAGCGGCGCC ATGCTACGACGCGCCCGAGGGCGTGGACGTCCGCGGGCGGTACGACCGGGAGTTCGCGGG CATCCTCACCCGCGACGCGCTGGACTTCGTGGCCGGCCTGCAGCGCGAGTTCCGCGCCGC CGTCCGCTACGCCATGGAGCAGCGGCGGGAGGCCCAGCGCCGGTACGACGCCGGCGAGCT GCCGCGGTTCGACCCGGCCACGACGCTCGTGCGCGAGGGGGACTGGACGTGCGCGCCCGT GCCGCCGGCCGTCGCGGACCGCACCGTGGAGATCACGGGCCCCGCCGAGCCGCGGAAGAT GGTCATCAACGCGCTCAACTCCGGCGCCAAGGTCTTCATGGCTGACTTCGAGGACGCGCT GTCGCCGACGTGGGAGAACCTGATGCACGGGCAGGTGAACCTGCGGGACGCCGTGGCTGG CACCATCAGCTTCCGCGACGCGGCGCGCGGGCGGACGTACGAGCTCAACGACCGAACCGC CAAGCTCTTCGTCCGGCCCCGCGGCTGGCACCTCCCCGAGGCGCACATCCTCATCGACGG CGAGCCGGCCATTGGCTGCCTCGTCGACTTCGGCCTCTACTTCTTCCACAACCACGCTGC CTTCCGCGCAGGCCAGGGCGCCGGCTTCGGGCCGTTCTTTTACCTGCCCAAGATGGAGCA CTCCAGGGAAGCGAGGATATGGAACGGGGTGTTCCAGAGAGCGGAGAAAGCTGCTGGGAT CGAGCTCGGGAGCATCCGGGCAACGGTGCTGGTGGAGACGTTGCCAGCGGTGTTCCAAAT GAACGAGATCCTGCACGAGCTGCGCGAGCACTCGGCGGGGCTCAACTGCGGCCGCTGGGA CTACATCTTCAGCTACGTCAAGACGTTCCGCGCCCACCCGGACCGCCTCCTCCCCGACCG CGCCCTCGTCGGCATGGCCCAGCACTTCATGCGCTCCTACTCCCACCTCCTCATCCACAC CTGCCACCGTCGCGGAGTCCACGCCATGGGCGGCATGGCGGCTCAGATCCCGATCAAGGA CGATGCGGCGGCGAACGAGGCGGCACTGGAGCTGGTGCGCAAGGACAAGCTGAGGGAGGT GCGCGCGGGCCACGACGGCACGTGGGCGGCGCACCCGGGGCTCATCCCGGCGATACGGGA GGTCTTCGAGGGCCACCTCGGCGGGAGGCCGAACCAGATCGGCGACGCCGCAGGGCACGA GGGTGCCAGCGTCAACGAGGAGGACCTCATCCAGCCGCCGCGGGGCGCGCGCACTGTGGA CGGTCTGCGGCTCAACGTCCGCGTGGGCGTGCAGTACCTCGCGGCGTGGCTGGCCGGCTC CGGCTCCGTCCCGCTGTACAACCTGATGGAGGACGCGGCTACGGCGGAGATCAGCCGCGT CCAGAACTGGCAGTGGCTGCGCCACGGAGCGGCGCTGGACGCCGGCGGTGTGGAGGTGCG CGCGACGCCAGAGCTACTCGCACGCGTCGTCGAGGAGGAGATGGCGAGGGTCGAGGCAGA GGTCGGCCCCGACAGGTTCCGAAAGGGGCGGTACGCGGAGGCGGGCAGGATCTTCAGCCG GCAGTGCACCGCGCCGGAGCTGGACGACTTCCTCACGCTGGACGCGTACAACCTCATCGT GGCGCACCATCCAGGTGCGTCACCGTGCAAGCTCTGAATACATGCATGCCTTTTGTGGCA GTGGAGTCAGCTTTCAAAAATAACACATCGCTGTCCAATGCAGCCATCGAAATAAGGACG GATGACCAACAAACATGATAGACATGAACAGCCTTGTAAAGCGCACTGCATATTCTCTGC TCTGGGACTTTTAGTCGTGCTTATGATAGTACAGGGTGGTCTATGTAATAAACTGAGCTT CTGTTGAACTCTCGGGAAGGACAACTGCACAACCCTGTATGAGTGTACCGAGACTATCTT TTCACCCTCAGAACTACCGCTCTACAACGTGTATCTTTCTAATTTTATAAATCAAACTTA TTTAACTTTAATCGCGCTTATAGAGAACAATATACTACTGCATCAAATTATATAATATTG GGAAGTGG