Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003220_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:36506464:36511337:-1 gene:Zm00001d003220 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP binding protein

Sequence

ATGGCGCGCCCTAGGGGCAAGAAGCGCACGGCGCCCCGGGCGGCCGCCACTGATTCTGTC
CAGCCGGAGGCGGCGGCGACGGAGACAGCGGCGGCGGAGCCGGCAAATCGGGGGCGGTGG
AAGCGCGTCAAGGCGCCGCCCAAGCCCAAGCCCGAGACGGATTACTTCGCCGAGAAAAGA
AATCTGGAGGATCTATGGTTATCTGCTTTTCCTGTCGGTACTGAGTGGGAAAACATTGAT
AAGATAAAGGAGTTCAACTGGAGCTTTGAAAATTTAGAGAAAGCCTTAGAAGAAGGGGGC
GAGCTTCATGGTAAAACAGTTTATCTGTTTGGAAGCACTGAGCCCCAACTATTGGATGTT
AATGGCGAATCAAAGATAGTGCTTATTCCAATCGTAGTTGCTGTAGACTGCCCTTTCCCT
CCATCAGACAAAATTGGCATAAACTCTGTCCAAAGGGAAAATGAGGAAATAGTGCCAATG
AAGGCGATGAAGATGGCATGGGTGCCTTATGTTCCCCTTGAGGACCGGCTTAGCAGGATT
GACAGTTTGAAAACAAAAATATTCACTCTCGGATGCACGCAGCGGAGGTCTGCACTGAAG
CATCTCAAAATTGAGAGAGTCAAGAAGTTTGACTACTGCATGCCTTGTAAGCTTAATCTA
AACCCCCGGTGTAGATTGTTGTCATGCATCACTGTGTTTACTTTCTACTGCTTGTTGCAG
ATAGTAGATGAGTTTGACTGGGAAATGGACGATTACGAGGATTTTGCTGATCAGAAAGTT
CAAGAAGGTGGCCTGCCAGAGGATGAGAAAGAAAAATTCAAGGAGTTCCTGAAGGAGAAG
GTTAGAGAAAGGAAGAGAGAGCTTAAACAGGCTAAAGAAGCCAGGAGGAAAGCTATTGAT
GATATGGATCCTAAGGTGAAAGAGGCATTCGAGAACATCAAATTTTACAAATTTTATCCT
GTGAAAACCCCAGACACGCCTGATGTAAACAATGTAAAGGCGAGGTACATCAACAGATAC
TACAGGAATGCCCATTATCTGATGTGA

Peptide Sequence

PEP ID

Zm00001d003220_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:36506464:36511337:-1 gene:Zm00001d003220 transcript:Zm00001d003220_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP binding protein

Sequence

MARPRGKKRTAPRAAATDSVQPEAAATETAAAEPANRGRWKRVKAPPKPKPETDYFAEKR
NLEDLWLSAFPVGTEWENIDKIKEFNWSFENLEKALEEGGELHGKTVYLFGSTEPQLLDV
NGESKIVLIPIVVAVDCPFPPSDKIGINSVQRENEEIVPMKAMKMAWVPYVPLEDRLSRI
DSLKTKIFTLGCTQRRSALKHLKIERVKKFDYCMPCKLNLNPRCRLLSCITVFTFYCLLQ
IVDEFDWEMDDYEDFADQKVQEGGLPEDEKEKFKEFLKEKVRERKRELKQAKEARRKAID
DMDPKVKEAFENIKFYKFYPVKTPDTPDVNNVKARYINRYYRNAHYLM

Transcript Sequence

Transcript ID

Zm00001d003220_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:36506464:36511337:-1 gene:Zm00001d003220 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP binding protein

Sequence

CCCTCGTGGCTCGTCCCATTCCCGCACCATCTCGACAAACCACACCAACTGTCATCGGAC
GGCCCAAAACTGTGCCGCGTGTTCCGTTCAACGGCTATTTCAGCCCGCAGAACGCACATC
AGAAGGGTAAAGCCACGAACCCCCCGGTCCGCGCCTGCGCCGCCTTCCCTCTCCTGCCTT
CTCCGCTTCAAATTTGCGTAGCGTTGATTTCACGCCCGGATCTCACAACGCTCAATCCAA
ACGCTAGCCGCAACCCTAACCCTAGCAACCGGTGAGTAATGGCGCGCCCTAGGGGCAAGA
AGCGCACGGCGCCCCGGGCGGCCGCCACTGATTCTGTCCAGCCGGAGGCGGCGGCGACGG
AGACAGCGGCGGCGGAGCCGGCAAATCGGGGGCGGTGGAAGCGCGTCAAGGCGCCGCCCA
AGCCCAAGCCCGAGACGGATTACTTCGCCGAGAAAAGAAATCTGGAGGATCTATGGTTAT
CTGCTTTTCCTGTCGGTACTGAGTGGGAAAACATTGATAAGATAAAGGAGTTCAACTGGA
GCTTTGAAAATTTAGAGAAAGCCTTAGAAGAAGGGGGCGAGCTTCATGGTAAAACAGTTT
ATCTGTTTGGAAGCACTGAGCCCCAACTATTGGATGTTAATGGCGAATCAAAGATAGTGC
TTATTCCAATCGTAGTTGCTGTAGACTGCCCTTTCCCTCCATCAGACAAAATTGGCATAA
ACTCTGTCCAAAGGGAAAATGAGGAAATAGTGCCAATGAAGGCGATGAAGATGGCATGGG
TGCCTTATGTTCCCCTTGAGGACCGGCTTAGCAGGATTGACAGTTTGAAAACAAAAATAT
TCACTCTCGGATGCACGCAGCGGAGGTCTGCACTGAAGCATCTCAAAATTGAGAGAGTCA
AGAAGTTTGACTACTGCATGCCTTGTAAGCTTAATCTAAACCCCCGGTGTAGATTGTTGT
CATGCATCACTGTGTTTACTTTCTACTGCTTGTTGCAGATAGTAGATGAGTTTGACTGGG
AAATGGACGATTACGAGGATTTTGCTGATCAGAAAGTTCAAGAAGGTGGCCTGCCAGAGG
ATGAGAAAGAAAAATTCAAGGAGTTCCTGAAGGAGAAGGTTAGAGAAAGGAAGAGAGAGC
TTAAACAGGCTAAAGAAGCCAGGAGGAAAGCTATTGATGATATGGATCCTAAGGTGAAAG
AGGCATTCGAGAACATCAAATTTTACAAATTTTATCCTGTGAAAACCCCAGACACGCCTG
ATGTAAACAATGTAAAGGCGAGGTACATCAACAGATACTACAGGAATGCCCATTATCTGA
TGTGATGGCTTTCCTTATCGCACGTGCTTGGCGAGCTTGTCACTTGAGAGGAGTTGATAT
GAAAACAGTTCGGTGTTGTACTAGAGTTGGCCCCAGTTTTTCACCCCCCCTGGGCATCTT
TTGCTCTCCGGTGTATACAATCCTGAGGATAGATTATTGTGTAGCACTAAGAGGGGCAAA
GTAGTTTGAGACTAAACAAATCATTAAGGAACAATTTGTTCCCTTTTCATCATCTATTTT
GTGGTTGTTTT