Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003207_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:2:35910526:35926156:-1 gene:Zm00001d003207 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI8
Sequence

ATGGAATCCGAGGACGACATGCACGACGCGAACGACTCCGCTGAAGACGATTTCTACAGC
GGCGGGGAGGCCGGTCTCGCCGCCAGCGACGACGGAGACGCCGACTACGACTTTGCGGAC
CACGACTCCGACGACTCCGCGGAGCTCATCTCCCACAGACAGCAGCAAAATTATAGTATA
TTGAGTGAAGTTGATATACAGCGGCGCCAAGAGGATGATATAAATAGGGTTTCAACCGTT
CTTTCAATTTCCAAACCAGAAGCATGTGTTCTTCTCCGCAACTATAACTGGAGTGTTAGT
AAGGTGCATGACGAATGGTTTGCTGATGAAGAGCGTGTCCGGAAGGTTGTGGGTTTACCA
GAGAAGCATAATGAAATGCCAAATGACAGAGAAGTAACATGTGGAATATGTTTCGAAAGT
TGCCCTCGTGGGTCGATGAGTGCTGCTGCATGTGGTCATCCTTTCTGCAGTACATGTTGG
AGAGGTTACATTAGCACTGCTATAAGTGATGGTCCAGGATGTTTGATGTTGAGGTGTCCT
GATCCATCTTGTGCTGCTGCTGTTGGACAAGATATGATAAATTCACTGGCTGCTGATGAT
GATAAGGAAAAGTATGGGCGATATCTTCGCAGATCTTACATTGAGGATAATAGAAAGACA
AAATGGTGTCCTGCGCCTGGATGTGAATACGCAGTGGAATTCGTCATGGGCAGTGGCAGC
TATGATGTTAATTGCAACTGTTCATATGGGTTTTGTTGGAATTGCACCGAGGAAGCTCAT
CGTCCAGTAGACTGTGCCACTGTTTCGAAGTGGATCCTCAAGAACAGTGCAGAGTCAGAG
AATATGAATTGGATACTGGCTAATTCAAAGCCTTGTCCCAAATGCAAACGGCCT

Peptide Sequence

PEP ID

Zm00001d003207_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:2:35910526:35926156:-1 gene:Zm00001d003207 transcript:Zm00001d003207_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI8
Sequence

MESEDDMHDANDSAEDDFYSGGEAGLAASDDGDADYDFADHDSDDSAELISHRQQQNYSI
LSEVDIQRRQEDDINRVSTVLSISKPEACVLLRNYNWSVSKVHDEWFADEERVRKVVGLP
EKHNEMPNDREVTCGICFESCPRGSMSAAACGHPFCSTCWRGYISTAISDGPGCLMLRCP
DPSCAAAVGQDMINSLAADDDKEKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGS
YDVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRP

Transcript Sequence

Transcript ID

Zm00001d003207_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:35910526:35926156:-1 gene:Zm00001d003207 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI8
Sequence

CTCCACATCCCCACCCTCCCTCCGTCTCCGCCTCCGCCTGCGCCACCCTCCAATCCGCGC
CGGCGCGTCGCCACCCTACCCGATTGCTACCTCCTCGTGGTGGGCGCCGCTCCGATCCGC
CCGATCCGCGCCGGCGCCTCGCCACCCTACCCGATTGCTACCTCCTCGTGGTGGGCGCCT
GCTCCTGGAGTTCCGGCGCGCGGCGGGGGCGGCGTAGTAATGGAATCCGAGGACGACATG
CACGACGCGAACGACTCCGCTGAAGACGATTTCTACAGCGGCGGGGAGGCCGGTCTCGCC
GCCAGCGACGACGGAGACGCCGACTACGACTTTGCGGACCACGACTCCGACGACTCCGCG
GAGCTCATCTCCCACAGACAGCAGCAAAATTATAGTATATTGAGTGAAGTTGATATACAG
CGGCGCCAAGAGGATGATATAAATAGGGTTTCAACCGTTCTTTCAATTTCCAAACCAGAA
GCATGTGTTCTTCTCCGCAACTATAACTGGAGTGTTAGTAAGGTGCATGACGAATGGTTT
GCTGATGAAGAGCGTGTCCGGAAGGTTGTGGGTTTACCAGAGAAGCATAATGAAATGCCA
AATGACAGAGAAGTAACATGTGGAATATGTTTCGAAAGTTGCCCTCGTGGGTCGATGAGT
GCTGCTGCATGTGGTCATCCTTTCTGCAGTACATGTTGGAGAGGTTACATTAGCACTGCT
ATAAGTGATGGTCCAGGATGTTTGATGTTGAGGTGTCCTGATCCATCTTGTGCTGCTGCT
GTTGGACAAGATATGATAAATTCACTGGCTGCTGATGATGATAAGGAAAAGTATGGGCGA
TATCTTCGCAGATCTTACATTGAGGATAATAGAAAGACAAAATGGTGTCCTGCGCCTGGA
TGTGAATACGCAGTGGAATTCGTCATGGGCAGTGGCAGCTATGATGTTAATTGCAACTGT
TCATATGGGTTTTGTTGGAATTGCACCGAGGAAGCTCATCGTCCAGTAGACTGTGCCACT
GTTTCGAAGTGGATCCTCAAGAACAGTGCAGAGTCAGAGAATATGAATTGGATACTGGCT
AATTCAAAGCCTTGTCCCAAATGCAAACGGCCTAT