Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003203_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:2:35515810:35545037:-1 gene:Zm00001d003203 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase III subunit 1
Sequence	ATGGCGAAGCCGGAGGAGAAGCTGCGCTGCACCAAGGAACCCTTCATCGAGGACGTCGGC ACCCGGAGGATAAAGAGCATCCGGTTCAGCGTGCTCTCGGGCAGCGAGATTCGCAAGTCA GCGGAGGTACAGGTCTGGAACAACCGGATCTATGACCGCGACATGACGCCGGTTCCCAAT GGGTTGCTCGACCCGCGAATGGGAATCCCGACTAAGAGAGGCAAATGCAATACCTGCCAT GGTGAATTTAGTGACTGTCCAGGTCATTTCGGCTACTTGAAGCTCGCGCTTCCAGTTTTT AACGTGGGCTTCTTTAACTGTATTCTGGACGTGTTGAAGTGCATCTGCAAGAGCTGTAGT AGAGTTCTTCTTATCGAGAAAGACCGCAGGGAGTTTCTAAAGAAGATGAGAAATCCCAGG GCAGATGCACTACAGAAAAGTGCTACAATGAAAAAAGTGAGGGACAAATGCAAACTATCC TGCTGCCCCCGTTGTGATTACAGAAATGGTGTAGTTAAAAAAGGCAGAGCGGGCTTGATA GTAGTTCATGATTGTAGCAAAGTTTTGGATGGACATACAGAAGAATTGAAGAATGCACTA CAAAATAAGAAAGAAAAGGTGTCTGCTAGTTCAGTTCTAGTGTTAGACCCTGCAACTGTT CTATCTCTATTCAGAAGAATGATTGATGAGGATTGTGAATTACTAAACCTTGGTGATAGG CCAGAGAAACTTATTGTGACAGAGATTGCAGTGCCACCTGTTCCTATACGGCCTTCTGTT GTTGTTGGTAATAGTAGAACAAGCAACGAAGACAGCATTACAGTTATTTTGAAGAGCATT GTTAATACAAACTCCATCCTTAAGGAGACCCTTCATACTGGGGGTCCATTCACCAAGTGC TTTGATTGCTGGCAATACCTTCAACTTCAAGTTGTTGAATATGTGAATAGTGATGCCCCT TCTCTTCCTGAGTCACAACATCGGGGCCTTGTTCAACGACTCAAAGGGAAGACTGGACGA TTTCGTGGCAATTTGTCCGGAAAACGTACTGAGTACACAGGAAGAACCGTCATATCTCCT GATCCAAATTTGAAAATAACAGAGGTGGCTATTCCTGTGTTGATGGCTCGAGTCTTGACT TATCCTGAAAGGGTTTCAAACTATAACATTGAGAAGCTGAGACAATGTATACGAAATGGA CCATTCAAATATCCAGGGGCTAATTTTGTTACACAACCTGATGGCATGAAGCAGAGCTTA AAGTATGGTGATAGAAGGATTACTGCTCGGGATTTAAAGTGTGGATGTATAGTTGAAAGA CATTTAGAAGATGGAGATGTTGTCCTCTTTAATAGACAGCCGAGCCTGCATAGAATGTCA ATTATGTGTCACAGGGCAAGGATAATGCCATGGAGAACACTCAGATTTAATGAGTCTGTT TGCAACCCTTACAATGCTGATTTTGACGGAGATGAAATGAATTTGCATGTCCCTCAGACA GAGGAAGCTCGCACTGAAGCGCTTATGCTCATGGGGGTTCAGAATAATTTATGTACTCCT AAGAATGGTGAGATACTGGTTGCTTCCACGCAAGACTTCTTGACCTCATCTTTCCTAGTT ACAAGAAAAGATACTTTCTATGATAGATCTTCCTTTACTCTTTTGTGCTCATACCTTGGT GATGGAATGGAGAACATTGATTTGCCAACACCAGCCTTGATTAAACCTGTTGAGCTTTGG ACTGGTAAACAACTATTTAGTGTGTTAGTCCGACCTAATGCGCACACAAAGGTGTTTCTG AATCTTGCTGTTCAAGAAAAAATTTATTCAAAGAAAAAGGGAAAAAAAGAGGGGGGAGAG GAGGTAAAGGAAACAATGTGTGGAAGGGAAACAATGTGTCCCAATGATGGTTATGTTTAT TTCCGAAATAGTGAACTGTTATCTGGACAAGTAGGGAAGGCCACTTTAGGTAATGGGAAC AAGGATGGCCTTTACTCTGTTCTTTTAAGAGATTATAATTCTCATGCTGCAGCAAGCTGT ATGAATCGTTTGGCAAAATTTAGTGCAAGATTTATAGGGAACCATGGTTTTTCCATTGGT GTGGACGATGTCCAACCAGGAGAACATCTAAATCGGCAAAAGAAAAAGGAAATAGACGGA GGGTACAAAAAATGCCATGATCTTATTTCTTTGTTTGCGAAAGGCGCGCTCGCATTGCAT CCTGGTTGCAACGCAGCCCAAACGCTGGAGCATAACATCACTGGTGTGTTAAATGAAATC AGATCAATTGCTGGAAATGTGTGCATGGATACGCTTCACTGGAGGAACAGCCCATTGATT ATGTCTCAGTGTGGTTCCAAAGGTTCTCCAATCAATATCAGTCAGATGGTTGCATGTGTT GGACAGCAATCAGTTGGAGGGCGTCGTGCCCCAGATGGTTTTCTAAACAGAACTCTTCCT CACTTTCCTATAAATTCAAAGACCCCTGCAGCTAAAGGTTTTGTTGCTAATTCATTCTAT ACTGGTTTGACTGCTACTGAGTTTTTCTTCCACACAATGGGTGGACGAGAAGGTCTTGTT GACACGGCGGTCAAAACAGCAGAAACTGGATATATGTCCCGCAGATTGATGAAAGGCTTG GAAGATCTCTCAGTTTTCTATGATCAGACAGTTCGAAATGCTAGCGGTGGTATAGTTCAA TTTTTGTATGGAGATGATGGCATGGATCCTGCAAAGATGGAAGGAAAAGATGGCATGCCC TTAAATTTGGATCAATTGTTTATGAAAGTCATGGCCACATGTCCTCAAAGGGGATCAGAT ACATTATCTCCAGTGGGCATCAAACAGATGTTAGAGGATAAGTTCTTGCAGCATGACACC TCATCTGATGGTGGCTGTAGTGCAGAGTTCAAGAAAAACTTAACTGAATTCCTTGATAAA CGTATAGAATTAATGAAATGCACAAGAAGGGCACTCCATCTACATGAGGATCATGTAGAA AAGAAAGATTCTTGCCTAGAAGAATCTATTGCTGCTATTATATCTGGTATATCTGCAAAA CAACTTCAGGTTTTCTTGGACACTTGCTTATCTCGTTATCAGTCAAAGAAGATTGAAGCA GGAGCATCTATTGGAGCAATTGGAGCTCAAAGTATTGGGGAGCCAGGGACTCAGATGACA CTGAAAACATTTCATTTTGCGGGAGTAGCTAGCAAGATGTTACTCTTGGTGTTCCTCGAA TCAAGGAAATTATCAATGCTGCTAAAAAGATAA

Peptide Sequence

PEP ID	Zm00001d003203_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:2:35515810:35545037:-1 gene:Zm00001d003203 transcript:Zm00001d003203_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase III subunit 1
Sequence	MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRDMTPVPN GLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS RVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLI VVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLGDR PEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC FDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISP DPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSL KYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESV CNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLV TRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKVFL NLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGN KDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDG GYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLI MSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFY TGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQ FLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFLQHDT SSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISGISAK QLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASKMLLLVFLE SRKLSMLLKR

Transcript Sequence

Transcript ID	Zm00001d003203_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:35515810:35545037:-1 gene:Zm00001d003203 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase III subunit 1
Sequence	GCCGCCGCCTAAGCTGCTTCCACCTCCGCTTTCTGTGCAGAGGACTCCTCGCCGGAGAAT AGCCGGCGGCGGCTCGAGACGAAACTACGGTGCTCGTCTCCCGCCGCCCGCCGCCCTTCA CTCCCCAGCATACCTAGTCCCTACTCTAATCCGTACAGAGCAACGCATCAAGTGATGGCG AAGCCGGAGGAGAAGCTGCGCTGCACCAAGGAACCCTTCATCGAGGACGTCGGCACCCGG AGGATAAAGAGCATCCGGTTCAGCGTGCTCTCGGGCAGCGAGATTCGCAAGTCAGCGGAG GTACAGGTCTGGAACAACCGGATCTATGACCGCGACATGACGCCGGTTCCCAATGGGTTG CTCGACCCGCGAATGGGAATCCCGACTAAGAGAGGCAAATGCAATACCTGCCATGGTGAA TTTAGTGACTGTCCAGGTCATTTCGGCTACTTGAAGCTCGCGCTTCCAGTTTTTAACGTG GGCTTCTTTAACTGTATTCTGGACGTGTTGAAGTGCATCTGCAAGAGCTGTAGTAGAGTT CTTCTTATCGAGAAAGACCGCAGGGAGTTTCTAAAGAAGATGAGAAATCCCAGGGCAGAT GCACTACAGAAAAGTGCTACAATGAAAAAAGTGAGGGACAAATGCAAACTATCCTGCTGC CCCCGTTGTGATTACAGAAATGGTGTAGTTAAAAAAGGCAGAGCGGGCTTGATAGTAGTT CATGATTGTAGCAAAGTTTTGGATGGACATACAGAAGAATTGAAGAATGCACTACAAAAT AAGAAAGAAAAGGTGTCTGCTAGTTCAGTTCTAGTGTTAGACCCTGCAACTGTTCTATCT CTATTCAGAAGAATGATTGATGAGGATTGTGAATTACTAAACCTTGGTGATAGGCCAGAG AAACTTATTGTGACAGAGATTGCAGTGCCACCTGTTCCTATACGGCCTTCTGTTGTTGTT GGTAATAGTAGAACAAGCAACGAAGACAGCATTACAGTTATTTTGAAGAGCATTGTTAAT ACAAACTCCATCCTTAAGGAGACCCTTCATACTGGGGGTCCATTCACCAAGTGCTTTGAT TGCTGGCAATACCTTCAACTTCAAGTTGTTGAATATGTGAATAGTGATGCCCCTTCTCTT CCTGAGTCACAACATCGGGGCCTTGTTCAACGACTCAAAGGGAAGACTGGACGATTTCGT GGCAATTTGTCCGGAAAACGTACTGAGTACACAGGAAGAACCGTCATATCTCCTGATCCA AATTTGAAAATAACAGAGGTGGCTATTCCTGTGTTGATGGCTCGAGTCTTGACTTATCCT GAAAGGGTTTCAAACTATAACATTGAGAAGCTGAGACAATGTATACGAAATGGACCATTC AAATATCCAGGGGCTAATTTTGTTACACAACCTGATGGCATGAAGCAGAGCTTAAAGTAT GGTGATAGAAGGATTACTGCTCGGGATTTAAAGTGTGGATGTATAGTTGAAAGACATTTA GAAGATGGAGATGTTGTCCTCTTTAATAGACAGCCGAGCCTGCATAGAATGTCAATTATG TGTCACAGGGCAAGGATAATGCCATGGAGAACACTCAGATTTAATGAGTCTGTTTGCAAC CCTTACAATGCTGATTTTGACGGAGATGAAATGAATTTGCATGTCCCTCAGACAGAGGAA GCTCGCACTGAAGCGCTTATGCTCATGGGGGTTCAGAATAATTTATGTACTCCTAAGAAT GGTGAGATACTGGTTGCTTCCACGCAAGACTTCTTGACCTCATCTTTCCTAGTTACAAGA AAAGATACTTTCTATGATAGATCTTCCTTTACTCTTTTGTGCTCATACCTTGGTGATGGA ATGGAGAACATTGATTTGCCAACACCAGCCTTGATTAAACCTGTTGAGCTTTGGACTGGT AAACAACTATTTAGTGTGTTAGTCCGACCTAATGCGCACACAAAGGTGTTTCTGAATCTT GCTGTTCAAGAAAAAATTTATTCAAAGAAAAAGGGAAAAAAAGAGGGGGGAGAGGAGGTA AAGGAAACAATGTGTGGAAGGGAAACAATGTGTCCCAATGATGGTTATGTTTATTTCCGA AATAGTGAACTGTTATCTGGACAAGTAGGGAAGGCCACTTTAGGTAATGGGAACAAGGAT GGCCTTTACTCTGTTCTTTTAAGAGATTATAATTCTCATGCTGCAGCAAGCTGTATGAAT CGTTTGGCAAAATTTAGTGCAAGATTTATAGGGAACCATGGTTTTTCCATTGGTGTGGAC GATGTCCAACCAGGAGAACATCTAAATCGGCAAAAGAAAAAGGAAATAGACGGAGGGTAC AAAAAATGCCATGATCTTATTTCTTTGTTTGCGAAAGGCGCGCTCGCATTGCATCCTGGT TGCAACGCAGCCCAAACGCTGGAGCATAACATCACTGGTGTGTTAAATGAAATCAGATCA ATTGCTGGAAATGTGTGCATGGATACGCTTCACTGGAGGAACAGCCCATTGATTATGTCT CAGTGTGGTTCCAAAGGTTCTCCAATCAATATCAGTCAGATGGTTGCATGTGTTGGACAG CAATCAGTTGGAGGGCGTCGTGCCCCAGATGGTTTTCTAAACAGAACTCTTCCTCACTTT CCTATAAATTCAAAGACCCCTGCAGCTAAAGGTTTTGTTGCTAATTCATTCTATACTGGT TTGACTGCTACTGAGTTTTTCTTCCACACAATGGGTGGACGAGAAGGTCTTGTTGACACG GCGGTCAAAACAGCAGAAACTGGATATATGTCCCGCAGATTGATGAAAGGCTTGGAAGAT CTCTCAGTTTTCTATGATCAGACAGTTCGAAATGCTAGCGGTGGTATAGTTCAATTTTTG TATGGAGATGATGGCATGGATCCTGCAAAGATGGAAGGAAAAGATGGCATGCCCTTAAAT TTGGATCAATTGTTTATGAAAGTCATGGCCACATGTCCTCAAAGGGGATCAGATACATTA TCTCCAGTGGGCATCAAACAGATGTTAGAGGATAAGTTCTTGCAGCATGACACCTCATCT GATGGTGGCTGTAGTGCAGAGTTCAAGAAAAACTTAACTGAATTCCTTGATAAACGTATA GAATTAATGAAATGCACAAGAAGGGCACTCCATCTACATGAGGATCATGTAGAAAAGAAA GATTCTTGCCTAGAAGAATCTATTGCTGCTATTATATCTGGTATATCTGCAAAACAACTT CAGGTTTTCTTGGACACTTGCTTATCTCGTTATCAGTCAAAGAAGATTGAAGCAGGAGCA TCTATTGGAGCAATTGGAGCTCAAAGTATTGGGGAGCCAGGGACTCAGATGACACTGAAA ACATTTCATTTTGCGGGAGTAGCTAGCAAGATGTTACTCTTGGTGTTCCTCGAATCAAGG AAATTATCAATGCTGCTAAAAAGATAAGCACACCTATTATCACCGCTCAGCTTTTGTCAA GGAAAGATGTGCTTTCTGCGCGCATTGTGAAAGGATCTATGGAGAAAGCAGTGCTTGGCG AGGTTGCAGCAACCATTCAGACTGTCCTGAAATCAAGTCTGCCAAACTTGGTTGTCAAAC TTGATATGCAACTTATAGAAACTCTCCACATGGGAATATCTGCTGATTCTGTGAAGCTGT CAATTTTGAATCATCCAAAGCTTAAGTTAAAATCTGAGCATGTCCGAGTCATTGATAGAG CCAAGTTGCGAATATATCCAGCTGGAACTGACAAGCTCAAACTTCAGCTTGAACTGCATA ACCTCAAATCCATCCTTCCAAAAGTGATTGTGAAGGGCATTCCAACTGTTGAAAGGGTTG TTATTGATGAAGTTAAAGTCAACAACGCGACAGAAAGATACCAATTGTTGGTTGAAGGAA CAAACCTCCTGGCAGTCATGGGTACCCCAGGAGTTGATGCTAGGAAGACGAAAAGTAATC ACATCATGGAAACGAACCAAACACTTGGAATTGAAGCTGCTAGGAGATCTATTATTGATG AGATTCAATACACAATGAAAAGTCATGGCATGAACATTGATCGGAGACATATGATGCTCT TGGCAGATTTAATGACATACAAGGGTGAAATTCTCGGCATTACTAGATACGGCATTGCAA AGATGAAAAGCAGTGTGCTGATGCTTGCTTCATTTGAGAAAACCGCAGAACATCTATTCA ATGCCTCATACAGTGGTCGTCAGGATCAGATAGAGGGAGTTAGTGAATGCATTATCATGG GCATTCCCATGCAGCTCGGTACCGGTATTCTCAAAGTCAGGCAAAGGCTCGACCATGTGC CTGAATTCAAGTACCAACCGGACCCGATACTGTCGTGATACATACATGTGGACTGAAGCT GGAACTCTGTACATATATATAGCTGGGTCATACATGCATAGCGTAGCGTAGCCTAGGGCA ACCCTGGCGGCTTGTCATTTCTCCGGTGAACATCTAACTAGTCTCGTTCCATCTCCATGA GGCAGACTCTAGGTCAACAACTCCCTCTTCGGCTGCATCGGCAAATGCGAGAGTAAAATT GTGGCAAACACTTGCTACATCTTCTAGGCAGTGGTACATGATCGTGTTACATATCTCTGC AGGCTAATGAAGCCTGGGAAGAATCATTGTTTTTTTCTTGACTAGATAAATATCTGTGTT GTAAAGGAAAAATAATAATACAATGAGAATT