Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003190_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:35066062:35067313:1 gene:Zm00001d003190 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase A1 description:Endochitinase A

Sequence

ATGGCAAACGCGCCGAGGATCCTGGCCCTCGGCCTGCTAGCGCTCCTGTGCGCTGCCGCC
GGCCCGGCCGCCGCGCAGAACTGCGGCTGCCAGCCAAACTTCTGCTGCAGCAAGTTCGGC
TACTGCGGCACGACCGACGCCTACTGCGGCGACGGGTGCCAGTCGGGCCCGTGCCGCTCG
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGAGGCAGTGGCGGTGCGAACGTG
GCTAATGTGGTCACCGACGCGTTCTTCAACGGCATCAAGAACCAGGCCGGGAGCGGGTGC
GAGGGCAAGAACTTCTACACCCGGAGCGCGTTCCTGAGCGCCGTCAACGCGTACCCGGGC
TTCGCCCATGGCGGGACGGAGGTGGAGGGCAAGCGCGAGATCGCCGCCTTCTTCGCGCAC
GTCACGCACGAGACCGGACATTTCTGCTACATCAGCGAGATCAACAAGAGCAACGCCTAC
TGCGACGCGAGCAACAGGCAGTGGCCGTGCGCGGCGGGGCAGAAGTACTACGGGCGCGGC
CCGCTGCAGATCTCGTGGAACTACAACTACGGGCCCGCCGGGAGGGACATCGGCTTCAAC
GGGCTCGCCGACCCCAACAGGGTGGCGCAGGACGCCGTGATCGCGTTCAAGACGGCGCTC
TGGTTCTGGATGAACAACGTGCACCGTGTGATGCCGCAGGGCTTCGGCGCCACCATCAGG
GCCATCAACGGCGCCCTCGAGTGCAACGGGAACAACCCCGCCCAGATGAACGCGCGCGTC
GGCTACTACAAGCAGTACTGCCAGCAGCTCCGCGTCGACCCAGGGCCCAACCTCACTTGC
TAG

Peptide Sequence

PEP ID

Zm00001d003190_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:35066062:35067313:1 gene:Zm00001d003190 transcript:Zm00001d003190_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase A1 description:Endochitinase A

Sequence

MANAPRILALGLLALLCAAAGPAAAQNCGCQPNFCCSKFGYCGTTDAYCGDGCQSGPCRS
GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPG
FAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRG
PLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHRVMPQGFGATIR
AINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC

Transcript Sequence

Transcript ID

Zm00001d003190_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:35066062:35067313:1 gene:Zm00001d003190 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase A1 description:Endochitinase A

Sequence

ACCTCACACAACAAGCTGCACCGCAGCAACGAACACGAACCTTGGCAGAACGAAGCTGAA
GTAGTTCGCTGTGAACCCAGTATGGCAAACGCGCCGAGGATCCTGGCCCTCGGCCTGCTA
GCGCTCCTGTGCGCTGCCGCCGGCCCGGCCGCCGCGCAGAACTGCGGCTGCCAGCCAAAC
TTCTGCTGCAGCAAGTTCGGCTACTGCGGCACGACCGACGCCTACTGCGGCGACGGGTGC
CAGTCGGGCCCGTGCCGCTCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGA
GGCAGTGGCGGTGCGAACGTGGCTAATGTGGTCACCGACGCGTTCTTCAACGGCATCAAG
AACCAGGCCGGGAGCGGGTGCGAGGGCAAGAACTTCTACACCCGGAGCGCGTTCCTGAGC
GCCGTCAACGCGTACCCGGGCTTCGCCCATGGCGGGACGGAGGTGGAGGGCAAGCGCGAG
ATCGCCGCCTTCTTCGCGCACGTCACGCACGAGACCGGACATTTCTGCTACATCAGCGAG
ATCAACAAGAGCAACGCCTACTGCGACGCGAGCAACAGGCAGTGGCCGTGCGCGGCGGGG
CAGAAGTACTACGGGCGCGGCCCGCTGCAGATCTCGTGGAACTACAACTACGGGCCCGCC
GGGAGGGACATCGGCTTCAACGGGCTCGCCGACCCCAACAGGGTGGCGCAGGACGCCGTG
ATCGCGTTCAAGACGGCGCTCTGGTTCTGGATGAACAACGTGCACCGTGTGATGCCGCAG
GGCTTCGGCGCCACCATCAGGGCCATCAACGGCGCCCTCGAGTGCAACGGGAACAACCCC
GCCCAGATGAACGCGCGCGTCGGCTACTACAAGCAGTACTGCCAGCAGCTCCGCGTCGAC
CCAGGGCCCAACCTCACTTGCTAGGCGACGGCGTCCACGTTGTACCCATGGCTCCTGCTA
GTGCTAGCTCGTCCACAATAAATGCTCGGCGTCGCACCCTCGCGAAAAGTAAACCAAGAG
TTTACTGACTAGTACGAGCTAGCTAGCATGCAGTAATAATAATCATCGTAATAATAATAA
TAAAACGACTGGGCTGAGCCACTTTGTTCGACCTGAATGAATAATGAAGCAACTGTATGT
TCCCTCTGT