Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003181_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:2:34889677:34892415:-1 gene:Zm00001d003181 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

ATGGCGGCTTCTTCCGGGACGCGCTCCGTGCGCCTGCTGGTGCTGCTGCTCTGCCTTCTC
GGGTTCTGCGTCGCGCTGAGCCACCAGGAGTCGGCGGCGGACTCGTGCGCCAGGGCCAAG
GTCGCGGTCGCCAGCCTCGTGCCCTTCGACTCCACGTCCTTCCGCTGCACCGCCGCCTGG
AAGCAGCAGGACTTCGTCCTCAGGTACAAGAACACGGGGCCCAGCGAGTGGAGCTTCATC
CTCTCGGCGCCGGACAGGGGCTCGTACGTGGCGGTCGGCTTCTCGGGCAAGGGCGCCATG
GTGGGGAGCAGCGCCGTCGTCGGGTGGGCGGCCAACGGCAGGGGCACCGTCAAGCAGTAC
TACCTCGGCGGGAAGAGCCCCGAGGAGTGCGCCCCCAACAGGGGCCTCCTCAAGCTCGTC
AGGAACAGGACCGCCGTCGCCTCGCGCTCCGGCCGCCTCTACCTCGCCTTCCAGCTCAGC
ACCGACTACCCGCAGCCGTACCTGATCTACGCCGTCGGGCCGGACGGCAGCCTGCCGCAG
TCCGACTCGCTGCGGCTGCCGGCGCACCAGAACATGGCCTCCCGCTCCTTCAACTACACC
TCCGGTACGTCCCCGGCCCCCGGCCCCCGAATTAATCCACGCGGTTTTTACATTTTTTTT
TCTCCACCCCCGGTGTGTGTGTGTGTCGAATCGACAAATGCGTGCGTGTGCGCAGGGCTG
TCGTACAACGTCGCCGGGTCCGGCGACGCCGCGTTCCCGCCGGAGAGGAAGCACGGGCTG
CTGGGCATGATGGGGTGGGGCGTGCTGATGCCCATCGGCATGATCACCGCGCGCTACTTC
CGGCAGCTGGACCCGTGCTGGTTCTACACCCACATGGCCATCCAGGTGGCTGGCTACGCC
GTCGGCATCGCGGGCATCGTCCTCGGCTTCCGCCTCAGCGAGGACGGGCTCAGGAACGTG
GACGTGCACAAGGCGCTCGGCATCGCCATCTTGGCCATGGCGTCTCTTCAGGTGATGGCG
ATCCTGGCGCGGCCGGACAAGACGTCCAAGGTGCGGCGGTTCTGGAACTGGTACCACCAC
AACATCGGGCGCGCGGCGATCCTGCTGGCCATCGGCAACATCTTCCTGGGCCTCTCCATC
GCGCAGGAGACCAGCGCCTACATCGTCTCCTACGGCGTGTTCGTCGCCGTCTGGGTGCTC
GCCGTCGCCGCCTTCGAGATGAAGCGCTGCTACGCCGACGACGACTGA

Peptide Sequence

PEP ID

Zm00001d003181_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:2:34889677:34892415:-1 gene:Zm00001d003181 transcript:Zm00001d003181_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

MAASSGTRSVRLLVLLLCLLGFCVALSHQESAADSCARAKVAVASLVPFDSTSFRCTAAW
KQQDFVLRYKNTGPSEWSFILSAPDRGSYVAVGFSGKGAMVGSSAVVGWAANGRGTVKQY
YLGGKSPEECAPNRGLLKLVRNRTAVASRSGRLYLAFQLSTDYPQPYLIYAVGPDGSLPQ
SDSLRLPAHQNMASRSFNYTSGTSPAPGPRINPRGFYIFFSPPPVCVCVESTNACVCAGL
SYNVAGSGDAAFPPERKHGLLGMMGWGVLMPIGMITARYFRQLDPCWFYTHMAIQVAGYA
VGIAGIVLGFRLSEDGLRNVDVHKALGIAILAMASLQVMAILARPDKTSKVRRFWNWYHH
NIGRAAILLAIGNIFLGLSIAQETSAYIVSYGVFVAVWVLAVAAFEMKRCYADDD

Transcript Sequence

Transcript ID

Zm00001d003181_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:34889677:34892415:-1 gene:Zm00001d003181 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

GAGGACAGTAGCAGTAGCAAGTAGCAGCATACTCTCCTACGCGAATCGATTAACGGGCGG
CACTCACCCACCGTGTGGCCTGCCAAACTGTCCCCTAGGCCCCGGCCCCGCCCGCGCCTG
GCCAGTGGCCATCCATCCCTTCCCTTCGCTTCGACGCACCAATCTTGTCCCGGCGCCTGC
CAAATCCAGCAAGGCCACACAGCCCGAGGCAGGAAGGGCAGCGCAGGAACAGGGAGCGAG
CAGCGCACGGGCAATGGCGGCTTCTTCCGGGACGCGCTCCGTGCGCCTGCTGGTGCTGCT
GCTCTGCCTTCTCGGGTTCTGCGTCGCGCTGAGCCACCAGGAGTCGGCGGCGGACTCGTG
CGCCAGGGCCAAGGTCGCGGTCGCCAGCCTCGTGCCCTTCGACTCCACGTCCTTCCGCTG
CACCGCCGCCTGGAAGCAGCAGGACTTCGTCCTCAGGTACAAGAACACGGGGCCCAGCGA
GTGGAGCTTCATCCTCTCGGCGCCGGACAGGGGCTCGTACGTGGCGGTCGGCTTCTCGGG
CAAGGGCGCCATGGTGGGGAGCAGCGCCGTCGTCGGGTGGGCGGCCAACGGCAGGGGCAC
CGTCAAGCAGTACTACCTCGGCGGGAAGAGCCCCGAGGAGTGCGCCCCCAACAGGGGCCT
CCTCAAGCTCGTCAGGAACAGGACCGCCGTCGCCTCGCGCTCCGGCCGCCTCTACCTCGC
CTTCCAGCTCAGCACCGACTACCCGCAGCCGTACCTGATCTACGCCGTCGGGCCGGACGG
CAGCCTGCCGCAGTCCGACTCGCTGCGGCTGCCGGCGCACCAGAACATGGCCTCCCGCTC
CTTCAACTACACCTCCGGTACGTCCCCGGCCCCCGGCCCCCGAATTAATCCACGCGGTTT
TTACATTTTTTTTTCTCCACCCCCGGTGTGTGTGTGTGTCGAATCGACAAATGCGTGCGT
GTGCGCAGGGCTGTCGTACAACGTCGCCGGGTCCGGCGACGCCGCGTTCCCGCCGGAGAG
GAAGCACGGGCTGCTGGGCATGATGGGGTGGGGCGTGCTGATGCCCATCGGCATGATCAC
CGCGCGCTACTTCCGGCAGCTGGACCCGTGCTGGTTCTACACCCACATGGCCATCCAGGT
GGCTGGCTACGCCGTCGGCATCGCGGGCATCGTCCTCGGCTTCCGCCTCAGCGAGGACGG
GCTCAGGAACGTGGACGTGCACAAGGCGCTCGGCATCGCCATCTTGGCCATGGCGTCTCT
TCAGGTGATGGCGATCCTGGCGCGGCCGGACAAGACGTCCAAGGTGCGGCGGTTCTGGAA
CTGGTACCACCACAACATCGGGCGCGCGGCGATCCTGCTGGCCATCGGCAACATCTTCCT
GGGCCTCTCCATCGCGCAGGAGACCAGCGCCTACATCGTCTCCTACGGCGTGTTCGTCGC
CGTCTGGGTGCTCGCCGTCGCCGCCTTCGAGATGAAGCGCTGCTACGCCGACGACGACTG
ATGAGCTAGCGACACGTAAGAGTCACAGTTCGGTCCCAACAGCTGACGGCGAAGTTTGGT
GTCGTTAAACTGAGCGTTCCACGGCCAGCTGGGACGTGACAGACACACGAGCGCCGAGCG
CGCGCGCGCGCACACACACACCATTCTTGTTGTTCCGTAGCTCGCAGCTGGACAGTGCAT
TATTGGTTCGAGGAGGGCGTGCTTTGGTTGGCTAATTAAAAAAAAAATGTTTTTTTTTTT
AGGTATAGGATGTGAGGAAGGGGACGGTCTGCTGTTTCTAGGCTAGCTGGACGCTCTGAT
TCATAAATTTGTACATTGATTGGTACGTGGTCGTGTTGTGTTGTACCCTTTTTGGACGAT
AGCATGTTCTTCGCCCTT